Oncorhynchus tshawytscha (Chinook salmon): 112254194
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Entry
112254194 CDS
T05605
Name
(RefSeq) plakophilin-1
KO
K10387
plakophilin 1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
otw04812
]
112254194
Cytoskeleton proteins [BR:
otw04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filament-binding proteins
112254194
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
HEAT
Atx10homo_assoc
Arm_2
Adaptin_N
Motif
Other DBs
NCBI-GeneID:
112254194
NCBI-ProteinID:
XP_024282288
LinkDB
All DBs
Position
Unknown
AA seq
751 aa
AA seq
DB search
MMTMDPLKSAMSIGNVDETSLALPSDKKLRSKQQRVLDQVQTIKRGKSKYSKHGSVSSPT
TSPTSPVYINIFADSFKSPTSLNGGAFFNGTNGLSKTLSYEKSTKRRVVASKESTVQRNM
SSSSQWERRFPLSPTIGKHNSSRSVPDLAPFPTTTSTTTTMQQQLLQSSAPARQLQPNRS
SFFLTERNSSQVISNGNSSSQVAVKGNEVQKRNSQLIGTRQTKSSGQITSSQGRIERAPS
NISVAESKMSGIKIKGEAGINGNGQIADITMKEAVEYLSSGDENYQLCGASFIQHATYSE
DKAKQEVLRLKGIPPLVNLLRCPSPQVQQTASAALRNLAFKDAGNKEEVQRCGGITEALA
LLRDTDSTETQKQLTGLLWNLSSADSLKPELVRSALPVLTETVVVPYTGDETNNNQDPEV
FYHATACLRNLSCATQGNRQAMRNCRGLVDSLVSYVQRCVAAERPDDKSVENCVCVLHNL
SFQLESEAPALFSRINALARTPSRANAPSETGPIGCFSPQSSKVQDQESHFDYPVMEEQN
PKGAGWLFHSKTMQSYLSLLGSSQREETLEACSGALQNLTAYHGNVSSVISQSIVQKLNG
LPHISPLLQSSNPSLQKTAVSLVGNLAKNQRLQSTMARQTLPELVGILSSWTKEETECDD
TLAMACQTSHSLLMKEPELGKPLLTNKLVNSVNDLSKNRDFPKASKAAGVLLYSLWSEKD
VQSFLKKQGMNKGSFVNDITSAAHRSVQVIE
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
atgatgacaatggacccgttgaaatcggccatgtccatcgggaatgtggatgagacatct
cttgctttgccatccgataaaaaacttcggtccaaacagcagcgagtcttggatcaggtg
caaaccatcaagaggggcaagtcgaagtacagtaaacatggatctgtgtcgtcgccaacg
acatccccaacgagtcctgtgtacatcaacatattcgctgactcctttaagtcacctacc
agtcttaatgggggtgccttctttaatggtacaaatggcctctcaaaaacgctcagctat
gagaaaagcaccaagcgaagggtcgtggcctccaaggaatctacggtccagaggaacatg
agcagctccagccagtgggagagacgattccctctcagccccaccataggcaagcacaac
agcagccgcagtgtgcctgacctggcccccttccccaccactactagtaccaccaccacc
atgcagcagcagctactgcagtcctcggcccccgcccggcagctccagcccaacaggtcc
agcttcttcctgaccgagaggaacagcagtcaggtcatctccaatggcaacagctcctct
caggtcgctgtcaaaggcaacgaggtgcagaaaaggaacagccagttgattggcacgcgt
cagacgaaaagtagtggccagattaccagcagccaaggtcgtattgagagggcaccctca
aacatctctgtggctgagtccaagatgtcagggatcaagatcaagggtgaagcggggatt
aatggtaatggtcagatagctgatataaccatgaaggaggcggtggagtacctgtccagt
ggagatgagaactaccagctctgtggagcctccttcatccaacacgctacctactcagag
gacaaggccaagcaggaggtgttgcggctcaaagggatcccccctttggtgaacctgctt
aggtgtcccagtccccaggtccaacagactgcctccgccgccctgcggaacttggccttt
aaagatgcgggcaacaaggaggaggtccagcgctgtgggggcatcactgaggcactggcc
ctgctccgagacacagactctaccgagacacagaaacaactcacaggtctcctttggaac
ctgtcatctgcagacagtctgaagccagagctggtgcgtagtgctctgcctgtcctgact
gagactgtggtagtaccatacactggagatgagacaaacaacaaccaagacccagaggtc
ttctaccatgccacagcatgtctacgaaacctgagctgtgcgactcaaggcaacaggcag
gccatgcgtaactgtcgaggcctcgtcgactctctggtcagttatgtccagcgttgtgtg
gctgcagagaggccagatgacaagtctgtggaaaattgtgtgtgtgtcttgcacaacctg
agcttccagctggagagtgaagccccggccctcttcagcaggatcaatgccctggccagg
acccccagcagggccaacgcccccagtgagaccggccccattgggtgcttcagcccacag
agcagcaaggtccaggaccaggagagtcactttgactaccctgtgatggaggagcagaac
cctaaaggagcaggctggctcttccactccaagaccatgcagagttacctgtctctgctg
gggtccagccagagagaagagaccctggaggcctgctctggagccctgcagaacctcact
gcttaccatggcaatgtatctagtgtgataagccagagcatcgtgcagaagctgaacggc
ctgcctcacatctctcccttgctgcaatcctccaaccccagcctccagaaaactgctgtg
tctctggtagggaacctggccaagaaccaacgccttcagagcaccatggcccgacagacc
ctaccagagctagttggcatcctcagctcatggaccaaggaagagacggagtgtgatgac
accctggccatggcgtgccaaaccagccacagtctgctgatgaaggagcccgagctgggg
aaacccctgctgaccaacaagctggtcaactcagttaacgacctgagcaagaacagggat
ttcccaaaggccagcaaagctgcaggtgtgctcctctacagcctctggtcagagaaagac
gtacagagtttcctaaaaaagcaagggatgaataagggttcctttgtgaacgacatcacc
agtgcggctcaccggtctgtgcaggtcattgagtaa
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