Oncorhynchus tshawytscha (Chinook salmon): 112254194
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Entry
112254194 CDS
T05605
Name
(RefSeq) plakophilin-1
KO
K10387
plakophilin 1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04382
Cornified envelope formation
otw04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
112254194
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
112254194
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
otw04812
]
112254194
Cytoskeleton proteins [BR:
otw04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filament-binding proteins
112254194
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Arm
ARM_ARMC5
HEAT
Atx10homo_assoc
HSF2BP_C
Arm_2
HEAT_MROH2B_C
TPR_IPO5
WRM1_C
CTHT_0071780_C
Motif
Other DBs
NCBI-GeneID:
112254194
NCBI-ProteinID:
XP_024282288
UniProt:
A0AAZ3Q448
LinkDB
All DBs
Position
Unknown
AA seq
751 aa
AA seq
DB search
MMTMDPLKSAMSIGNVDETSLALPSDKKLRSKQQRVLDQVQTIKRGKSKYSKHGSVSSPT
TSPTSPVYINIFADSFKSPTSLNGGAFFNGTNGLSKTLSYEKSTKRRVVASKESTVQRNM
SSSSQWERRFPLSPTIGKHNSSRSVPDLAPFPTTTSTTTTMQQQLLQSSAPARQLQPNRS
SFFLTERNSSQVISNGNSSSQVAVKGNEVQKRNSQLIGTRQTKSSGQITSSQGRIERAPS
NISVAESKMSGIKIKGEAGINGNGQIADITMKEAVEYLSSGDENYQLCGASFIQHATYSE
DKAKQEVLRLKGIPPLVNLLRCPSPQVQQTASAALRNLAFKDAGNKEEVQRCGGITEALA
LLRDTDSTETQKQLTGLLWNLSSADSLKPELVRSALPVLTETVVVPYTGDETNNNQDPEV
FYHATACLRNLSCATQGNRQAMRNCRGLVDSLVSYVQRCVAAERPDDKSVENCVCVLHNL
SFQLESEAPALFSRINALARTPSRANAPSETGPIGCFSPQSSKVQDQESHFDYPVMEEQN
PKGAGWLFHSKTMQSYLSLLGSSQREETLEACSGALQNLTAYHGNVSSVISQSIVQKLNG
LPHISPLLQSSNPSLQKTAVSLVGNLAKNQRLQSTMARQTLPELVGILSSWTKEETECDD
TLAMACQTSHSLLMKEPELGKPLLTNKLVNSVNDLSKNRDFPKASKAAGVLLYSLWSEKD
VQSFLKKQGMNKGSFVNDITSAAHRSVQVIE
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
atgatgacaatggacccgttgaaatcggccatgtccatcgggaatgtggatgagacatct
cttgctttgccatccgataaaaaacttcggtccaaacagcagcgagtcttggatcaggtg
caaaccatcaagaggggcaagtcgaagtacagtaaacatggatctgtgtcgtcgccaacg
acatccccaacgagtcctgtgtacatcaacatattcgctgactcctttaagtcacctacc
agtcttaatgggggtgccttctttaatggtacaaatggcctctcaaaaacgctcagctat
gagaaaagcaccaagcgaagggtcgtggcctccaaggaatctacggtccagaggaacatg
agcagctccagccagtgggagagacgattccctctcagccccaccataggcaagcacaac
agcagccgcagtgtgcctgacctggcccccttccccaccactactagtaccaccaccacc
atgcagcagcagctactgcagtcctcggcccccgcccggcagctccagcccaacaggtcc
agcttcttcctgaccgagaggaacagcagtcaggtcatctccaatggcaacagctcctct
caggtcgctgtcaaaggcaacgaggtgcagaaaaggaacagccagttgattggcacgcgt
cagacgaaaagtagtggccagattaccagcagccaaggtcgtattgagagggcaccctca
aacatctctgtggctgagtccaagatgtcagggatcaagatcaagggtgaagcggggatt
aatggtaatggtcagatagctgatataaccatgaaggaggcggtggagtacctgtccagt
ggagatgagaactaccagctctgtggagcctccttcatccaacacgctacctactcagag
gacaaggccaagcaggaggtgttgcggctcaaagggatcccccctttggtgaacctgctt
aggtgtcccagtccccaggtccaacagactgcctccgccgccctgcggaacttggccttt
aaagatgcgggcaacaaggaggaggtccagcgctgtgggggcatcactgaggcactggcc
ctgctccgagacacagactctaccgagacacagaaacaactcacaggtctcctttggaac
ctgtcatctgcagacagtctgaagccagagctggtgcgtagtgctctgcctgtcctgact
gagactgtggtagtaccatacactggagatgagacaaacaacaaccaagacccagaggtc
ttctaccatgccacagcatgtctacgaaacctgagctgtgcgactcaaggcaacaggcag
gccatgcgtaactgtcgaggcctcgtcgactctctggtcagttatgtccagcgttgtgtg
gctgcagagaggccagatgacaagtctgtggaaaattgtgtgtgtgtcttgcacaacctg
agcttccagctggagagtgaagccccggccctcttcagcaggatcaatgccctggccagg
acccccagcagggccaacgcccccagtgagaccggccccattgggtgcttcagcccacag
agcagcaaggtccaggaccaggagagtcactttgactaccctgtgatggaggagcagaac
cctaaaggagcaggctggctcttccactccaagaccatgcagagttacctgtctctgctg
gggtccagccagagagaagagaccctggaggcctgctctggagccctgcagaacctcact
gcttaccatggcaatgtatctagtgtgataagccagagcatcgtgcagaagctgaacggc
ctgcctcacatctctcccttgctgcaatcctccaaccccagcctccagaaaactgctgtg
tctctggtagggaacctggccaagaaccaacgccttcagagcaccatggcccgacagacc
ctaccagagctagttggcatcctcagctcatggaccaaggaagagacggagtgtgatgac
accctggccatggcgtgccaaaccagccacagtctgctgatgaaggagcccgagctgggg
aaacccctgctgaccaacaagctggtcaactcagttaacgacctgagcaagaacagggat
ttcccaaaggccagcaaagctgcaggtgtgctcctctacagcctctggtcagagaaagac
gtacagagtttcctaaaaaagcaagggatgaataagggttcctttgtgaacgacatcacc
agtgcggctcaccggtctgtgcaggtcattgagtaa
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