Oncorhynchus tshawytscha (Chinook salmon): 112254603
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Entry
112254603 CDS
T05605
Name
(RefSeq) beta-1,4 N-acetylgalactosaminyltransferase 1
KO
K00725
(N-Acetylneuraminyl)-galactosylglucosylceramide N-acetylgalactosaminyltransferase [EC:
2.4.1.92
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw00600
Sphingolipid metabolism
otw00604
Glycosphingolipid biosynthesis - ganglio series
otw01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
112254603
09107 Glycan biosynthesis and metabolism
00604 Glycosphingolipid biosynthesis - ganglio series
112254603
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
otw01003
]
112254603
Enzymes [BR:
otw01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.92 (N-acetylneuraminyl)-galactosylglucosylceramide N-acetylgalactosaminyltransferase
112254603
Glycosyltransferases [BR:
otw01003
]
Glycan extension
Glycolipid
112254603
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Gene cluster
GFIT
Motif
Pfam:
Glycos_transf_2
FKRP_N
Glyco_transf_64
Motif
Other DBs
NCBI-GeneID:
112254603
NCBI-ProteinID:
XP_024283082
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Position
LG07:44291276..44317303
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AA seq
531 aa
AA seq
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MRSLRKTVLLAIVASVVLVMAFLHSWPTRAYTTVDVWQRPGPAVERHLEERFPEPDHRSA
NIPYHVKESVAGLLARNGCVCEGESGGMNLPFAQLLFPRVSAHPMHTAFEASELEEMKKR
RAKEYQGFQMRSQTPADMLIVAEANNPLQYPTQGMEVRPLKTILIPGLAVQDRPRELYTV
NFTSTLGTLNVAAEVEGVKVKGDGEMHMTLTSSLLSNLNRQLQFVTYTNTLFHPSTADTV
QFETEGHQAMFTIKVRHGVTPKLYNTGPKGEYNISALVTIATKTFLRYDKLQDLIDSVRK
YYSTVTIVIADDSENPKMVSGPYIEHYIMPFGKGWFAGRNLAVSQVTTKYVLWVDDDFIF
TANTKLEKLVDVLERTTLDLVGGAVREATGYTATYRQTMSIEPGEEEGDCLHLRRGFHHI
IQGFPNCVVTDGVINFFLARTDKVQQVGFDPRLARVAHLEFFIDGLGSLHVGSCDDVIVN
HATKIKLPWVSQSESDKTYAKFRYPPASSDATHTKNGLLYFKNRFQCLTHN
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgcgttccttaaggaagacagtgttgttggccatcgtggcgtctgtggtgttggtgatg
gccttcctccattcttggcccacccgggcctacaccaccgtggatgtctggcagagacca
gggcctgcagtagagaggcacttggaggagaggttcccagaaccagaccacagatctgcc
aacatcccctatcacgtgaaggagagtgttgcaggtctgttggcacgtaacgggtgtgtg
tgtgaaggtgagagtgggggcatgaacctgccctttgcccagctgctgttcccacgggtg
tcggcccaccccatgcacactgcatttgaggcttctgagctggaagagatgaagaaacga
agggccaaggagtaccagggcttccagatgaggtctcagactcctgcagatatgctcatc
gtggccgaggccaacaatcctctgcagtacccaacacaggggatggaagtacggccactc
aaaaccatcctcatcccaggacttgcagtacaagaccgtcccagagagctgtacacagtc
aacttcacctccaccctgggaacgttaaacgtggcagcagaggttgagggggtaaaggtc
aaaggtgacggggagatgcacatgaccctgaccagcagcctgctgtccaatttgaaccgg
cagctacagtttgtcacctataccaacacactgttccaccctagtacagcagacacggtg
cagtttgagacagagggtcaccaagccatgtttactatcaaggtccgtcatggtgtaact
ccaaaactctacaacacaggacccaaaggggaatacaacatcagtgcccttgttaccata
gcaaccaaaaccttcctgcgctatgacaagctccaagatctcatcgacagtgtgcgaaaa
tactattccactgtcaccatagtaatagctgatgacagtgaaaacccaaagatggtctct
ggcccctacatcgaacattacatcatgccatttggaaagggctggtttgcaggtcggaac
ctagccgtttcccaggtgactaccaagtatgtgctgtgggtggacgatgacttcatcttc
acggccaacaccaagctggagaaactggtggacgtcctggagaggactaccctggacctg
gtgggtggtgcagtgcgggaggccactggctatactgccacctacaggcagaccatgtcc
attgagccaggggaggaggagggtgactgcttgcatttgcggaggggcttccaccacatc
atccagggctttccaaactgcgtagtcacggacggggtcatcaacttcttcctggcccgc
acagacaaagtccagcaagtgggctttgacccccgtctggccagagtggcccacctggag
tttttcatcgatggcctcggctcacttcacgtgggatcctgtgatgatgtcatcgtcaac
cacgccaccaagatcaagcttccctgggtcagccaatcagagagtgacaagacgtatgcc
aagttccgctacccaccagcctcttcggatgccacacacaccaaaaacggcctcctctat
ttcaagaaccgcttccagtgtttgactcacaattaa
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