Oncorhynchus tshawytscha (Chinook salmon): 112255025
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Entry
112255025 CDS
T05605
Name
(RefSeq) E3 ubiquitin-protein ligase Itchy isoform X1
KO
K05632
E3 ubiquitin-protein ligase Itchy [EC:
2.3.2.26
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04120
Ubiquitin mediated proteolysis
otw04144
Endocytosis
otw04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
112255025
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
112255025
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
112255025
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112255025
04121 Ubiquitin system [BR:
otw04121
]
112255025
Enzymes [BR:
otw01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
112255025
Membrane trafficking [BR:
otw04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
112255025
Ubiquitin system [BR:
otw04121
]
Ubiquitin ligases (E3)
HECT type E3
112255025
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
SWI-SNF_Ssr4_C
Motif
Other DBs
NCBI-GeneID:
112255025
NCBI-ProteinID:
XP_024283824
UniProt:
A0A8C8GCE3
LinkDB
All DBs
Position
LG07:63361217..63394271
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AA seq
859 aa
AA seq
DB search
MKAQLQVTVLSAKLKENKKNWFGPSPYVEVAVDDQSKKTEKCNNTHTPKWKQSLTVIVTP
FSKLIFRVWSHQTLKADFLLGVATLDMSETLKSNDMKLSEVVQILQLCSDQDNTDVVGDL
SICLDGVQVDPETFASAERDHAATAPNRDVRQNEDGGNRSSRDTSPSSDSTEDWVIIPSG
HEINCTVSPAPSPGGSKSTRPPRPARPPPPTPRRPAASPASSSSSTPSDVSEPTASGGSS
SDPPPENGAEPPPPQAASTSGPEAIGAPPAGGLPQLGPVSNGPLPPGWEQRVDQNGRMYY
VDHIEKRTSWNRPDSLPSGWERRVDPMGRVYFVDHISRTTTWQRPTQESVRNFEEWQHQR
SQLQGAMQQFNQRFIFGLQDQQIAAANKEFDPLGPLPHGWEKRTDTNGRVYFVHHTSRMT
QWEDPRTQGLLNDKPLPEGWEMRFTVDGIPYFVDHNRRTTTYIDPRTGKSSLENGPQITY
VRDFKAKVQYFRFWCQQLSMPQHIKITVTRKTLFEDSFQQIMSFHPQDLRRRLWIIFPGE
EGLDYGGVAREWFFLLSHEVLNPMYCLFEYAGKDNYCLQINPASYINPDHLKYFKFIGRF
IAMSLFHGKFIDTGFSLPFYKRILNKPLALKDLESIDTEFYNSLIWIKDNNLEECGLEMF
FSVDKEILGEVTTHELKPDGGNVLVTEENKEEYIRLVAEWRLSRGVEEQTQAFFEGFNEV
LPQQYLQYFDAKELEVMLCGMQEIDLVDWQRHTIYRHYARSSKQILWFWQFVKEMDNEKR
MRLLQFVTGTCRLPMGGFADLMGSNGPQKFCIEKVGKENWLPRSHTCFNRLDLPPYKSYE
QLKEKLMFAIEETEGFGQE
NT seq
2580 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcacaacttcaagtcactgttctgtcggccaaactgaaggagaacaaaaagaac
tggtttggccccagtccgtacgtggaggtggctgtggacgaccagtcgaagaagacggag
aaatgcaacaacacccacacccccaaatggaagcagtcactcacagtaattgtcacaccc
ttcagtaagctcattttccgggtatggagtcatcagacgctgaaggccgacttcctattg
ggcgtggccacattggacatgagtgaaaccctcaagtccaatgatatgaaactctctgag
gtggtgcagatcttacagctgtgttcagaccaggacaacacagacgtggtgggagacctg
tccatctgtctggatggcgtgcaggtggacccagagacctttgcttctgcagagagagac
catgcagctactgctcccaacagggacgtgaggcagaacgaagatggaggcaacaggtcc
agcagagacacgtcaccttccagtgactctacagaggactgggtgatcatccccagtggc
cacgagatcaactgcacggtgtctcccgccccatccccagggggctccaagtccacacgc
ccccccagacctgctcgtcctcctccacccacccctcgcagaccagccgcctccccagcg
tcctctagcagctccactcccagcgacgtgagcgagcccacggcttcaggcggctcctcc
tcagacccccctcccgagaacggcgcagaacccccacccccacaggcagccagcaccagc
ggaccggaagccattggggcacccccagccggagggctcccccaactcggccctgtcagc
aacggcccactgccaccgggctgggagcagagggtggaccagaatgggcgcatgtattac
gtggatcacattgaaaagaggacgtcatggaaccgacccgattctctcccctctgggtgg
gagcggcgagtggacccaatgggcagggtgtacttcgtggaccacatcagccggaccacc
acgtggcagcgccctacgcaggagtcggtgcgtaactttgaggagtggcagcaccagcgc
agccagctgcagggggccatgcagcagttcaaccagaggttcatattcgggctccaggat
cagcaaatagccgcagcaaacaaagagtttgacccgcttgggccgctgccacatggctgg
gagaagcgaacagacaccaacggcagggtatattttgttcaccacacatcgcggatgacc
cagtgggaggacccacggacgcaagggctgcttaatgacaagcctctacctgaaggctgg
gagatgaggttcactgtggacggcattccctactttgtggaccacaacaggagaaccacc
acctacatcgaccctcgcacaggcaaatcctcccttgaaaatgggcctcagatcacctac
gtcagggacttcaaagccaaagtgcagtacttcaggttctggtgtcagcaactgtcaatg
ccacagcacatcaagatcaccgtcacccgcaaaaccctctttgaggattcattccagcaa
ataatgagctttcatccacaagatctcagacggaggctgtggataatattccctggagag
gaaggcttggactacggaggagtggcaagggagtggttcttcctgctgtctcatgaggtg
ctgaaccccatgtactgcctgtttgagtacgctgggaaggataactactgtctccagatc
aaccctgcctcttacatcaaccccgaccacctcaagtacttcaagttcattggacgcttc
atcgccatgtccttgttccacgggaagttcatcgatacgggattctccctgcccttctac
aagcgcatcctgaacaagcccctggccctaaaggacctggaatccattgacacggaattc
tacaactccctcatctggatcaaggataacaacctggaggagtgtggtctagagatgttc
ttctctgtggacaaggagatcctgggggaggttactactcacgagctgaagccggacgga
ggcaacgtactggtcactgaggagaacaaagaggaatacatcaggctggtggcagagtgg
aggttgtccagaggtgtggaggagcagacccaggccttcttcgagggcttcaacgaggtc
ctcccccagcagtacctgcagtactttgacgctaaggaactggaggtgatgctgtgtggc
atgcaggagatagacctggtggactggcagaggcacaccatctacagacactatgctcgc
agcagcaagcagatcctctggttctggcagtttgtgaaggagatggacaacgagaaacgc
atgaggctgctacagtttgtcactggcacctgtcggctccccatgggtggcttcgctgac
ctcatggggagtaatggaccacagaagttctgcatcgagaaggtgggcaaagaaaactgg
cttccaagaagtcacacttgctttaatcgactggacctgcccccctacaagagctacgag
caactgaaggagaagctgatgtttgccatcgaggaaactgagggcttcggacaggagtag
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