Oncorhynchus tshawytscha (Chinook salmon): 112255900
Help
Entry
112255900 CDS
T05605
Name
(RefSeq) E3 ubiquitin-protein ligase XIAP isoform X1
KO
K04725
E3 ubiquitin-protein ligase XIAP [EC:
2.3.2.27
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04120
Ubiquitin mediated proteolysis
otw04210
Apoptosis
otw04217
Necroptosis
otw04510
Focal adhesion
otw04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
112255900
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
112255900
04217 Necroptosis
112255900
09144 Cellular community - eukaryotes
04510 Focal adhesion
112255900
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
112255900
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
otw01002
]
112255900
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
otw04121
]
112255900
03029 Mitochondrial biogenesis [BR:
otw03029
]
112255900
Enzymes [BR:
otw01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112255900
Peptidases and inhibitors [BR:
otw01002
]
Peptidase inhibitors
Family I32: IAP family
112255900
Ubiquitin system [BR:
otw04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
112255900
Mitochondrial biogenesis [BR:
otw03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
112255900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BIR
zf-C3HC4_3
Prok-RING_4
UBA_BIRC2-3
Motif
Other DBs
NCBI-GeneID:
112255900
NCBI-ProteinID:
XP_024284504
LinkDB
All DBs
Position
LG08:77945218..77955081
Genome browser
AA seq
467 aa
AA seq
DB search
MSGPGRDSDLESDHAVDWSMMDMRLDSFRGSPLAQQVSAERLARAGFYFTGQADKVRCFS
CHKTVENWCGGDTPAERHAEVSPNCKFLSCTHRSRVNSLQGAMLTNEPHYNEDAEDMEFR
LRTGEVVDESTYPMVPHMVSEDSRFNTLGPWPSTSPVRPRELAQAGLFYLGESDRVQCFC
CGGMLGGWEPGDTAWGEHSKHFPYCFFILGHDVGNLPSQAGREEEVGETRPRPGPRVPMQ
SFEERLGSFAGIQHPIDHERLARAGFYNTGAPDRVVCFCCGGGLKGWQPDENPWEEHAKH
YPGCNFLLTEKGQEFVSSVQLQGPGRNNAASSHLNGCSSHGTEVLRSAMAQRAVEMGLEP
ALVERTILERIRRAGTGYSTLETLLQDCFNRGPDSDAETAENHDEDPFEKLRKLQREKQC
KVCMDRDICIVFIPCGHLVVCKECSEALDKCPICCAAITQKIKTYIS
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggccccgggagagacagtgatctggagtcggaccacgcagtagactggtccatg
atggacatgcggctggactcgttccggggttcccccctggcccagcaggtgtcagcggag
aggctggcccgtgctgggttttacttcacaggacaggctgacaaggtgcgctgcttcagc
tgccacaaaactgtagagaactggtgtggaggggacacacctgcggagaggcacgcggag
gtctcccctaactgtaagttcctgagctgcacccatcgttccagggtcaactctcttcaa
ggtgccatgctgaccaacgaaccccactacaacgaagacgctgaggacatggagttccgc
ctgagaacgggagaggtggtggatgagtccacctaccccatggtcccgcacatggtcagc
gaagactcccggttcaacaccttaggcccgtggccctccacatccccggtccggcctaga
gagctggcccaggcagggctcttctatctgggggagagtgaccgggtgcagtgcttctgc
tgtggagggatgctggggggctgggagcctggggacacagcgtggggggagcactccaaa
cacttcccctactgcttcttcatactggggcatgatgtggggaacctcccctctcaggcg
gggagagaggaggaggtaggggagaccaggccacgcccgggtcctcgggtccccatgcag
agctttgaggagaggctaggcagctttgcaggaatccagcaccctattgaccacgagagg
ctggccagagcaggcttctacaacacaggagctccagaccgtgtggtgtgtttctgctgt
ggtggaggtctgaagggctggcagccggacgagaatccctgggaggagcatgccaaacac
tatccggggtgtaattttctgctgacagagaaaggacaggagttcgtcagcagtgttcag
ttacaaggtcctggcaggaacaatgctgcttcaagtcacctgaatggatgttcaagtcac
ggaacagaggtgctgaggtcagccatggcccagagggcggtagagatgggtctggagcct
gccctggtagagaggaccatactggagaggatacgcagggctgggacaggctactccacc
ctggagactctgctgcaggactgctttaacagaggccctgacagcgacgcagagaccgca
gagaaccatgatgaggatccctttgagaagctacggaagctgcagagggagaaacagtgc
aaagtgtgtatggacagagacatctgcatcgtcttcatcccctgtgggcacctggtcgtc
tgcaaggagtgttccgaggccctcgacaagtgtcccatctgctgtgcagccatcacacaa
aagatcaagacatacatctcctaa
DBGET
integrated database retrieval system
