KEGG   Oncorhynchus tshawytscha (Chinook salmon): 112256252
Entry
112256252         CDS       T05605                                 
Name
(RefSeq) GTP-binding nuclear protein Ran isoform X1
  KO
K07936  GTP-binding nuclear protein Ran
Organism
otw  Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03008  Ribosome biogenesis in eukaryotes
otw03013  Nucleocytoplasmic transport
otw03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:otw00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    112256252
   03008 Ribosome biogenesis in eukaryotes
    112256252
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    112256252
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:otw03019]
    112256252
   03009 Ribosome biogenesis [BR:otw03009]
    112256252
   03016 Transfer RNA biogenesis [BR:otw03016]
    112256252
   03036 Chromosome and associated proteins [BR:otw03036]
    112256252
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:otw04147]
    112256252
   04031 GTP-binding proteins [BR:otw04031]
    112256252
Messenger RNA biogenesis [BR:otw03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     112256252
Ribosome biogenesis [BR:otw03009]
 Eukaryotic type
  Pre-40S particles
   Export and cytoplasmic maturation factors
    112256252
  Pre-60S particles
    112256252
Transfer RNA biogenesis [BR:otw03016]
 Eukaryotic type
  tRNA transport factors
   tRNA export factors
    112256252
Chromosome and associated proteins [BR:otw03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     112256252
   Spindle formation proteins
    112256252
Exosome [BR:otw04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   112256252
GTP-binding proteins [BR:otw04031]
 Small (monomeric) G-proteins
  Ran Family
   Ran
    112256252
SSDB
Motif
Pfam: Ras Roc Arf MMR_HSR1 GTP_EFTU G-alpha RNA_helicase AAA_24 Gtr1_RagA Pox_A32 ArgoMid AAA_7 Septin TsaE AAA_16 AAA_22
Other DBs
NCBI-GeneID: 112256252
NCBI-ProteinID: XP_024285125
UniProt: A0A8C8FG05
LinkDB
Position
LG08:57770054..57774123
AA seq 253 aa
MSGNGLRSSLNLPRTQPFTLFRFVSTPGEHKKPTTHSTMAEGEPQVQFKLVLVGDGGTGK
TTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGAIKYNVWDTAGQEKFGGLRDGYYIQA
QCAIIMFDVTSRVTYKNVPNWHRDLVRVCENIPIVLCGNKVDIKDRKVKAKSIVFHRKKN
LQYYDISAKSNYNFEKPFLWLARKLIGDPNLEFVAMPALAPPEILMDPSLAAQYEHDLKV
ASETALPDEDDDL
NT seq 762 nt   +upstreamnt  +downstreamnt
atgagcggaaacggactcaggtcgtcgctgaatctcccgcggacgcagccatttactctt
ttccgcttcgtttcaacgccgggagaacataaaaaacccacaacacattccacaatggca
gagggagagccgcaggtccagttcaagcttgtgttggttggcgatggaggaacgggaaag
accactttcgtcaaaagacatttgacgggagagtttgagaagaaatatgttgccacgctg
ggagtggaggtgcacccgctggtattccacaccaacaggggggccatcaaatataatgtg
tgggacacagccgggcaggagaagtttggagggctccgagatggctactacatccaagcc
cagtgcgcaatcatcatgtttgacgtcacgtcccgagtcacctacaagaacgtacccaac
tggcatcgtgatctggtgcgagtctgtgagaacattcccatagtcctctgcggcaacaag
gtagacatcaaagacaggaaagtcaaagccaagagcatcgtattccatcgcaagaagaac
ctccagtactatgacatctctgccaagagtaattacaactttgagaagcccttcctgtgg
ctagcacggaagctgattggagaccccaacctggagttcgtggccatgcctgctctcgcc
ccaccagagatcctcatggacccctccctcgcagcgcagtacgagcatgacctcaaagtt
gcatcagaaacagcgctcccagatgaagatgatgacctttaa

DBGET integrated database retrieval system