KEGG   Oncorhynchus tshawytscha (Chinook salmon): 112256274
Entry
112256274         CDS       T05605                                 
Name
(RefSeq) beta-1,4-galactosyltransferase 1
  KO
K07966  beta-1,4-galactosyltransferase 1 [EC:2.4.1.22 2.4.1.90 2.4.1.38 2.4.1.-]
Organism
otw  Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw00052  Galactose metabolism
otw00510  N-Glycan biosynthesis
otw00513  Various types of N-glycan biosynthesis
otw00514  Other types of O-glycan biosynthesis
otw00515  Mannose type O-glycan biosynthesis
otw00533  Glycosaminoglycan biosynthesis - keratan sulfate
otw00601  Glycosphingolipid biosynthesis - lacto and neolacto series
otw01100  Metabolic pathways
Module
otw_M00071  Glycosphingolipid biosynthesis, neolacto-series, LacCer => nLc4Cer
otw_M00075  N-glycan biosynthesis, complex type
Brite
KEGG Orthology (KO) [BR:otw00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00052 Galactose metabolism
    112256274
  09107 Glycan biosynthesis and metabolism
   00510 N-Glycan biosynthesis
    112256274
   00513 Various types of N-glycan biosynthesis
    112256274
   00515 Mannose type O-glycan biosynthesis
    112256274
   00514 Other types of O-glycan biosynthesis
    112256274
   00533 Glycosaminoglycan biosynthesis - keratan sulfate
    112256274
   00601 Glycosphingolipid biosynthesis - lacto and neolacto series
    112256274
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01003 Glycosyltransferases [BR:otw01003]
    112256274
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:otw04131]
    112256274
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:otw04147]
    112256274
Enzymes [BR:otw01000]
 2. Transferases
  2.4  Glycosyltransferases
   2.4.1  Hexosyltransferases
    2.4.1.22  lactose synthase
     112256274
    2.4.1.38  beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase
     112256274
    2.4.1.90  N-acetyllactosamine synthase
     112256274
Glycosyltransferases [BR:otw01003]
 Glycan extension
  Type 2 chain/Poly-N-acetyllactosamine
   112256274
Membrane trafficking [BR:otw04131]
 Exocytosis
  Calcium ion-dependent exocytosis
   Acrosomal exocytosis proteins
    112256274
Exosome [BR:otw04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   112256274
SSDB
Motif
Pfam: Glyco_transf_7N Glyco_transf_7C Glyco_tranf_2_2
Other DBs
NCBI-GeneID: 112256274
NCBI-ProteinID: XP_024285183
UniProt: A0A8C8FIU8
LinkDB
Position
LG08:complement(57020229..57041560)
AA seq 351 aa
MRDSVNFSVLHRTCKLVVLLCFFHISVTFIFYVRSLNFRFAFAKHDQTASKDTVPDAFET
NHFSVDNVTTITKELGKCPDTSPLLVGPLRIEFSNPVSLDVVRKENPNLKNGGRFKPKDC
VALQKVAIIIPFRNRDEHLKFWLYYLHPILQRQQLDYGVYVINQDGNEVFNRAKLLNVGY
SEALKEYDYGCFVFSDVDLIPMDDRNTYRCFRQPRHLSVSMDKFGFRLPYNQYFGGVSSM
SKEQFLKINGFPNNYWGWGGEDDDIFNRLNSKGMTISRPSGAVGKCRMIRHNRDGGNEDN
PQRFDRIAHTKETMNKDGIKTLSYKVVKVEKDQLYTKITVDVGKKMTLQTN
NT seq 1056 nt   +upstreamnt  +downstreamnt
atgcgggattcagtgaatttcagtgttctccatagaacctgcaagttggtcgtccttcta
tgttttttccatatttcggtcactttcattttttacgtgaggtcgttaaattttcgtttt
gcatttgcgaagcacgaccaaactgcatcaaaggacacagtaccggacgcgtttgaaacg
aaccacttttctgtagacaacgtgactacaatcaccaaagagcttggaaaatgtcctgac
acatcgccactgcttgttggcccactgcgaattgagttctccaacccagtcagcctggac
gtggtaaggaaggaaaaccccaatcttaagaatggggggcgcttcaagcccaaagactgc
gtggccctccagaaggtggccatcatcatccctttccgcaaccgcgacgagcacctcaag
ttctggctctactacctccaccccatccttcagcgccagcagttggactatggcgtctat
gtcatcaaccaggacggcaatgaagtcttcaaccgtgccaagctcctcaacgttggctac
tcggaggccctgaaggagtacgactacggctgctttgtgttcagtgacgtggacctcatc
cccatggatgaccgcaacacctacaggtgcttcagacagcccaggcacctgtctgtttcc
atggacaagtttggcttcagattgccgtacaaccagtactttggaggcgtgtcgtcaatg
agcaaggagcaattcctcaagatcaacggcttccccaacaactactggggctggggagga
gaggacgacgacattttcaacaggctgaactccaaggggatgaccatctcacggcccagc
ggagccgtggggaaatgcaggatgatccgccacaaccgggatggtgggaacgaagacaac
ccacagaggttcgaccgcatcgcccacaccaaggagaccatgaacaaagatggcataaaa
accctgtcgtacaaagtggtcaaagtggagaaggatcaattatacaccaaaatcactgtg
gacgtggggaaaaaaatgactctgcaaaccaattaa

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