Oncorhynchus tshawytscha (Chinook salmon): 112256318
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Entry
112256318 CDS
T05605
Symbol
sqstm1
Name
(RefSeq) sequestosome-1
KO
K14381
sequestosome 1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04137
Mitophagy - animal
otw04140
Autophagy - animal
otw04217
Necroptosis
otw04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
112256318 (sqstm1)
04137 Mitophagy - animal
112256318 (sqstm1)
09143 Cell growth and death
04217 Necroptosis
112256318 (sqstm1)
04218 Cellular senescence
112256318 (sqstm1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112256318 (sqstm1)
03029 Mitochondrial biogenesis [BR:
otw03029
]
112256318 (sqstm1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
otw04147
]
112256318 (sqstm1)
Membrane trafficking [BR:
otw04131
]
Autophagy
Mitophagy
Cargo receptors
112256318 (sqstm1)
Pexophagy
112256318 (sqstm1)
Aggrephagy
112256318 (sqstm1)
Xenophagy
112256318 (sqstm1)
ER-phagy
ER-phagy recepters
112256318 (sqstm1)
Other autophagy associated proteins
Midbophagy
112256318 (sqstm1)
Mitochondrial biogenesis [BR:
otw03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
112256318 (sqstm1)
Exosome [BR:
otw04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
112256318 (sqstm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA_5
ZZ
PB1
Motif
Other DBs
NCBI-GeneID:
112256318
NCBI-ProteinID:
XP_024285250
LinkDB
All DBs
Position
LG08:complement(54553177..54557350)
Genome browser
AA seq
469 aa
AA seq
DB search
MSMTVKAYLLGKEHMPKEIRRFAVDQDVSTSFEYLNRKVVDVFSTLRNVPYQMFYKDEDG
DMIAFSTDDELIMGLTCIKDDTFRLFIKEKKEHRREFPAFAFPGGVPPFAFPPHPGAPHM
GPPPPHGPPPHGHGPHGPPMVHPNVTCDECEGPVAGTRFKCTVCSNYDLCSPCQAKGLHK
EHVLLPIWHPFNNTFEWFPRGKWMRKMRHCMWAQAQSQTQPGPSGSQPGPSGSQPGQAAP
EDSQPSSDASSASSQQSQANMDYLKNIGEGVAAMLSPLGIDVDIDVEHEGKRTKVMTPNP
TPPGSGGHPGARSDNGTGWSEGAGANEGDMEVDELSSLGSASGLAKGGKDTGGSGDEEWT
HVTSKEVDPSTGELQSLRVGEEGSLEALGSLTPSQGPSQEPLKSLTLAEAAAYPHLPQDA
DPRLVESLSQMLSMGFTDEGGWLTRLLHTKDCDVGAALDTIHYSKPPQK
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgtctatgaccgtgaaagcctatctccttgggaaggaacacatgccgaaagaaattcgc
cgctttgccgtcgaccaagatgtttcaacgagttttgagtatttgaatcgaaaggttgtt
gatgttttctcaacactgcgaaatgtcccctaccaaatgttttacaaagacgaggacggt
gacatgatcgccttctccaccgacgatgagctcatcatgggcctcacctgcatcaaggac
gacaccttccgcctcttcatcaaggagaagaaggagcacaggcgtgagttccctgctttt
gctttcccaggcggtgtccctcctttcgccttcccccctcaccctggagcaccccatatg
gggccccctccaccccatggcccaccacctcatggtcatggtcctcacgggccccccatg
gtgcaccccaacgtgacctgtgatgaatgcgagggcccggtggcagggacccgttttaag
tgcactgtgtgctccaactacgacctatgctccccgtgccaggccaaggggctccacaag
gagcacgtcctcctacccatctggcaccccttcaacaacacatttgagtggttccctcgt
gggaagtggatgcggaagatgagacactgcatgtgggctcaggcccaaagccagacccag
cctggtccctccgggtcccagcctggtccctccgggtcccagccaggccaggcggccccc
gaggacagtcagccatcctctgatgcctcatctgcttcctcccagcagtcccaggccaat
atggattacctaaagaacattggagaaggggtggcagccatgcttagcccactgggtatc
gatgtggatattgacgtggagcacgaggggaagaggaccaaggtgatgacccccaacccg
accccacccgggtcaggaggccaccccggtgctaggagtgacaacgggacagggtggtct
gagggagcaggggcaaacgagggagacatggaggtggacgagctgagcagcctggggagc
gccagtggtttggctaagggtggtaaagacactgggggcagtggtgatgaggaatggact
cacgtgacctccaaggaggtggacccctctactggagagctccagtctctcagggtgggt
gaggagggctcactggaagccctagggtccctcaccccttcccagggtccctcacaggaa
ccactgaagtccctcactctcgctgaggccgcagcctacccccacttgcctcaagatgca
gacccacgcctggtggagtcgctgtcccagatgctgtccatgggcttcacagacgagggt
ggctggctcacccgtcttctccacaccaaggactgcgacgttggggccgccttggacacc
attcactactccaaacccccccagaagtaa
DBGET
integrated database retrieval system
