Oncorhynchus tshawytscha (Chinook salmon): 112256349
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Entry
112256349 CDS
T05605
Name
(RefSeq) transmembrane anterior posterior transformation protein 1 homolog isoform X2
KO
K23404
transmembrane anterior posterior transformation protein 1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
otw03037
]
112256349
Cilium and associated proteins [BR:
otw03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
112256349
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Gene cluster
GFIT
Motif
Pfam:
DUF747
DASH_Dad4
Motif
Other DBs
NCBI-GeneID:
112256349
NCBI-ProteinID:
XP_024285295
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Position
LG08:complement(51057666..51102748)
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AA seq
604 aa
AA seq
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MADLLGTVPSAEKETENKDKKKEKRPWDDIPRSGEIGKTTDLAETLGFYDINAVRREQRE
RDNSDPSLARFMCAELTRGYFLEHNEAKYTERRERVYTCMRIPRELEKLMIFGFFLCLDA
FLYVFTLLPLRVLLALLHLVTLPCCSLGGSRLLQPAQVCDILKGLIMVLCYSMMHYVDYS
MMYHLIRGQSVIKLYIIYNMLEVADRLFSSFGQDILDALYWTATEPKERKRDSIGVIPHF
LMAVFYVFLHAILIMVQASTLNVAFNSHNKSLLTIMMSNNFVEIKGSVFKKFEKNNLFQM
SNSDIKERFTSYVLLLIVCLRNMEQFSWSPDHLWVLLPDVFMVIASEIAVDVIKHAFITK
FNEITADVYSEYRASLAFDLVSCRQKNACTDYSDSVARRMGFIPLPLAVLLIRVVMSSVN
VQGALSYSCVFLFYMGMVTLKVLNSIVLLGKSCVYVKRANMEDKLFEKPPTAVPGMTPSQ
TSKTSRCTAPSGDLSGDPWSERSPSTPSCTSIPPSSSVTTQPTPTVVPTPQAETVAPPAT
SLTTTPTRPSTSPEPDPDTLTPSPPATPEQKEGDGTEGTELKHRTPKKDLLDVDRFTICG
NRID
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atggcggacttgttggggactgtgccgtcagctgaaaaagaaaccgaaaataaggacaag
aagaaggagaaacggccatgggatgatataccaaggtcgggggaaatcggtaaaactaca
gatctggcggaaacattgggcttttacgatataaatgctgtccgacgggagcaacgtgaa
cgtgataactcagatccgtcgctggctcgcttcatgtgtgctgagctgacccggggctac
ttcctggagcacaacgaagcaaaatacaccgagcgcagagagcgagtgtacacatgcatg
cgcattcccagagaactggaaaagctgatgatctttggcttcttcctgtgtctggatgcc
ttcctctacgtgttcacgctgcttcccctccgggtgctgctggccctgctacacctcgtc
accctgccctgctgcagcctcggtggctcgcgcctgctgcagccggcccaggtgtgtgac
atcttgaagggactgataatggtgctgtgctactccatgatgcactacgtggactacagc
atgatgtaccacctgatccggggacagtccgtcatcaaactctacatcatctacaacatg
ctggaggtagccgaccggctgttctcgtcgtttggccaggacatccttgacgctctctac
tggacggccacagagcccaaagagaggaagagagacagcataggggtcatcccccacttc
ctcatggctgtattctacgtcttcctgcatgccatcctcatcatggtccaggcgtcaacg
ctcaacgtggctttcaactcccacaataagtccctgctcaccatcatgatgtccaacaac
tttgtggagatcaaaggaagtgtgttcaagaagtttgagaagaacaacctctttcagatg
tccaacagtgatatcaaggaacggttcaccagttacgtactccttctcatcgtctgcctc
aggaacatggagcagttctcatggagcccagatcatctctgggtgttgttacctgatgtc
ttcatggtgatcgcctccgagatcgcagtggacgtcatcaaacacgccttcatcaccaag
ttcaacgagatcacggcagatgtatacagtgaatacagagccagcctggccttcgatctc
gtcagctgtcggcagaaaaacgcctgcacagactacagcgattccgtagccaggagaatg
ggcttcattcctcttcctcttgcagtcctgctaatccgagtggtgatgagttcagtgaat
gtacagggagccctgtcctactcctgtgtgttcctcttttacatgggaatggtgaccctg
aaagtgcttaacagtattgtgctgctggggaagtcgtgtgtgtacgtgaagagagccaac
atggaggacaagctgtttgagaagccccccacagccgtccccgggatgacgcccagtcaa
accagcaagacatccaggtgtactgccccctcaggtgatctgtcaggggatccgtggtct
gagcggtctccatccactccttcctgcacctccatccccccctcctcctctgtcaccacc
cagcctacccccactgtcgtccccaccccacaggcagagactgtggcccctcccgccact
tccctcaccaccaccccaaccagaccctccaccagcccagaaccggaccctgacaccctc
accccctcgccccctgccactcccgagcagaaggagggggatgggacggagggcacagag
ctcaagcacaggacccctaaaaaggacctgctggacgtagaccgcttcacgatatgcggg
aaccgcattgattga
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