Oncorhynchus tshawytscha (Chinook salmon): 112256958
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Entry
112256958 CDS
T05605
Symbol
pomca
Name
(RefSeq) LOW QUALITY PROTEIN: proopiomelanocortin a
KO
K05228
proopiomelanocortin
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04080
Neuroactive ligand-receptor interaction
otw04916
Melanogenesis
otw04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
112256958 (pomca)
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
112256958 (pomca)
04916 Melanogenesis
112256958 (pomca)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
otw04052
]
112256958 (pomca)
Cytokines and neuropeptides [BR:
otw04052
]
Neuropeptides
Neuropeptides (GPCR binding)
112256958 (pomca)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
NPP
Op_neuropeptide
ACTH_domain
DUF5546
Motif
Other DBs
NCBI-GeneID:
112256958
NCBI-ProteinID:
XP_042181102
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Position
LG08:complement(7872329..7875413)
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AA seq
230 aa
AA seq
DB search
MLCPAWLLAVAVVGVVSGVKGQCWENPRCQDLNSENSILECIQLCRSDLTAESPIFPGEV
HLQPNSPLTSSPSLPLSPLPLSPLEQQNIVSPQAKRSYSMEHFRWGKPVGKKRRPVKVYT
NGVEEESSEGFPSEMRRELGTNEAMYPSLEAGAVEGGEGLGGEADGLGGVFSLQEKKDGS
YKMNHFRWSGPPASKRYGGFMKSWDERSQKPLLTLFKNVIIKDGQQKREQ
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgctgtgtcctgcgtggttattggctgtggctgtggtgggtgtggtcagcggggttaaa
ggtcagtgctgggagaatcctcgctgtcaagacctcaactctgagaacagcatcctggag
tgcatccagctctgtcgttctgacctcaccgccgaatctcccatcttccctggcgaggtc
catctccaacccaactcccctctgacttcctccccctccttacctctgtcccccctcccc
ctgtcccccttggagcagcagaacattgtgtccccccaggccaagcgttcctactccatg
gaacacttccgctgggggaagcctgtgggaaagaagcgccgcccggtgaaggtttacacc
aacggtgtggaggaggagtcctccgagggcttccccagcgagatgagacgagagctgggc
accaacgaggccatgtacccctccctggaggctggggctgtggaagggggagagggcctg
gggggcgaggcggatggcctgggtggggtgtttagtcttcaggagaagaaagacggctcg
tacaagatgaaccacttccgctggagcggaccgcccgccagtaagcgctatggagggttc
atgaagagctgggacgaacgtagccagaaaccactgctcacgctgttcaaaaatgtaatc
atcaaagacggacagcagaagagagagcagtga
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