Oncorhynchus tshawytscha (Chinook salmon): 112259040
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Entry
112259040 CDS
T05605
Name
(RefSeq) transient receptor potential cation channel subfamily M member 4 isoform X1
KO
K04979
transient receptor potential cation channel subfamily M member 4
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
otw04040
]
112259040
Ion channels [BR:
otw04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
112259040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRPM2
LSDAT_euk
LSDAT_prok
Ion_trans
Motif
Other DBs
NCBI-GeneID:
112259040
NCBI-ProteinID:
XP_024289571
UniProt:
A0A8C8EPJ3
LinkDB
All DBs
Position
Unknown
AA seq
1276 aa
AA seq
DB search
MTGEEAGGRGQECVMTDKEHEGGEGRTGRRKSDKDQSWIPNIIRKRVCTTFVEDSLSNGA
LCQCGGMRETHGSNATGDYFGAAIVSQWDSSQHSSEYPTDAFGELEFAGAGRRQSHFLRL
SCDTPPQIVYSLMTAHWGVPSPNLVVSVVGSGGCEKVKPWVREVLRQGLVKAAQSTGAWI
VAGGLREGVGRCVGEAVRDHAAAASCLSQKKVIAVGVAPWGLVHNREQLVNTQGSFPARY
YVQNASRDSCCLDNNYQAFLLVDDGSVGRRGGETAFRSMMEDYISHQRTGIWDSGSIEIP
VLCMLISGEAAMLKRVDLSLRKATPWLVLNGSGPAADLICELLDALSAVPMSCTSPPPEG
EGSESPSAELRERTRERVKRHFPAEADREKLVDRALSIYQNRDLITVFHGEQDSPDDFDT
VLLKALVRASKRVSSDASEYTEELKLAVAWNRVDIANSELFNGDIQWRYEDLEDSMTDAL
INNKPQFVRLFNENGLNILDYLTYQRLEGLYRSLSNSSLAYTLLQRHLTERQSLARSLPT
VPCSPDEPTPLKSPISGPSSAKELSLYEVSRLLWDILGDVCQPFYYGPLGLDQSTSTWRT
LKQVNKLLLGDCLYREQGCVHPWASLFIWAVLQNRSEMAVYFWEMAGESVLSALAGCKIL
RELSKLESETAAKLSLKELAQKFENLANEVFSECYQSSESRSFNLLIRQSLVWGEATCLE
MATAADARLFFSHDGLQSLLSQIWWGDMERSTEVWKLILTFFLPPLIYTNLISFREPEEE
GKTEQVPHGQDTDSLDGVDATMFSLTDMMDEDAEEYAAVRVNLKGAPSSNPKRPFVLLRW
REFWFAPVTAFLGNVLMYFLFLSLFAYVLLLDFKPPPPHGPSTLEFVLYFWVFTLVCEEF
RQTFFRGSTTLYQRMKLYIQDMWNKCDITAISLFALGMCCRMFPWSYEFGRAVMAVDYMV
FTLRLIHIFAIHKQLGPKIIIVEKMMKDVFFFLFFLAVWLMAYGVANQALLYSYDPRPGW
IFRRVFYRPYLHIFGHIPIHEMDADKLEEGIECTNNVTLIEAGAEPCTSTYANWLVVILL
VIFLLVTNILLVNLLIAMFSYTFSKVQEHSDTHWKFQRYNLIAEYHSRPCLAPPFIILSH
LHLFIKRHIRRIPSVKIKHFVLDIRGRQASRLNTWEAIQKENILSAQNKREREKDSERLK
RTSVKVDSVLKQMAEIRDHGHRLRILEAELEYCSSALSWMVQALSQSNLIKPTRPPPTLR
DLTLQLADPSLENNEI
NT seq
3831 nt
NT seq
+upstream
nt +downstream
nt
atgaccggagaagaggcgggagggagggggcaagagtgcgtaatgacggataaagagcat
gaaggaggcgaaggaagaacgggaagaagaaaatccgacaaagatcagagctggatcccc
aacatcatcaggaagcgagtatgcaccacattcgtagaggactctttaagcaatggggca
ttgtgtcagtgtgggggcatgcgggagactcacggctccaacgctacgggagactatttc
ggagccgccatcgtcagccagtgggacagttcccagcactcctcagagtaccccaccgac
gccttcggagagctggaattcgcaggggctggcaggagacagagccatttcttgcgactg
tcatgcgacaccccacctcagatcgtgtacagtctgatgacggcccactggggggtgccc
tcccccaacctggtggtttctgttgtggggagtggggggtgcgagaaggtcaagccctgg
gtcagggaggtgctgagacaggggctggtcaaggcggcacagagcaccggggcgtggata
gtggcgggggggctgagggagggggtgggtcgttgtgttggggaggcagtgcgagatcat
gctgctgcggcttcctgtctctcccagaagaaagtcattgctgtgggcgtggccccctgg
gggctggtgcacaacagagagcagttagttaacacacagggtagtttccctgcgcggtat
tatgtccagaacgcatctcgtgactcgtgctgcctggataataactaccaggccttcctg
ctggtggatgatgggagtgtaggccggcggggaggggaaacggccttcaggtccatgatg
gaagactacatctcccaccagcgcaccggcatctgggatagtggcagtatagagattcct
gtgctgtgtatgctcatctcaggggaagctgccatgctgaagagggtggatctctctctg
aggaaggctactccctggctggtgttgaatggttctggtccagcggcagaccttatctgt
gagctgctggatgccctgtcagctgtgccgatgagctgcacctctcccccgccagagggt
gaggggagcgagagccccagcgcggagctgcgcgaaaggacccgtgagagggtcaagagg
cacttccctgctgaggcagaccgggagaagcttgtggacagggctctgagtatctatcag
aacagagatctgatcacagtgttccacggggagcaggacagtcctgatgattttgacact
gtgttactgaaggctctggtcagagccagtaaacgtgtgtccagcgacgccagtgagtac
acagaggagctgaagcttgcagtagcctggaacagggtggacatcgctaacagtgaactc
ttcaatggagacatccaatggaggtacgaggacctggaggactccatgacggatgcactg
atcaacaacaagccccagtttgtacgtctcttcaatgagaacggcctcaacatcctggac
tacctgacctaccagcgtctggagggcctgtaccgctcgctgtccaacagctctctggcc
tacacgcttctccagcgacacctcacagagaggcagagcctggccagatcccttcccact
gtcccctgctctccggacgagcctacacccctcaagagccccatatcaggaccctcctct
gccaaagagctcagcttgtatgaggtgtcgcggctactatgggacatcctgggagatgtg
tgtcagcccttctactacggtcctctgggtttggaccagagcaccagcacctggagaaca
ctgaagcaagtgaataagttgttactgggggattgtctgtatagggagcagggctgtgtc
catccctgggcctctctgttcatctgggctgtgctgcagaaccgcagcgagatggctgtc
tacttctgggagatggcaggggagtctgtcctcagtgctcttgcaggctgtaagattctg
agggagctgtctaagcttgagagtgagacggcggccaagctctctctgaaggagctagca
cagaagtttgagaacttggccaatgaagtgttcagtgaatgctatcagagcagtgagagt
cgctctttcaacctccttataaggcagtctctggtgtggggcgaagctacctgtctggag
atggccaccgcagccgatgcccgcctcttcttcagtcacgatggcttgcagtctctgctg
tctcagatctggtggggagacatggagaggagcacagaagtctggaaactgatcctcacc
ttcttcttaccccccctcatctacaccaacctcataagcttcagggaacctgaggaagag
gggaagactgagcaggtgccccatggtcaagacacagacagtctggatggagtcgatgcc
accatgttctccctcaccgacatgatggatgaggatgctgaggaatatgcggctgtaagg
gtcaatctgaaaggtgccccttcctctaatcctaagaggccgttcgtactgctacgctgg
agggagttctggttcgcgcccgtcacagcgtttctaggcaatgtgctgatgtacttcctg
ttcctcagcctgtttgcttacgtcttattgttggacttcaagcccccgccccctcacggc
ccgtccaccttagagtttgttctctacttctgggtcttcaccctggtctgtgaggagttt
cgacagacattcttcaggggcagcactactttatatcagaggatgaagctctacatccag
gacatgtggaataagtgtgacatcacagctatctcactctttgcactgggcatgtgctgc
agaatgttcccatggtcctatgaatttggccgggctgtgatggctgtggactacatggtg
tttaccctccgtctcatccacatattcgccatccacaaacagctgggacccaagatcatc
atcgttgaaaaaatgatgaaggacgtcttcttcttcctcttcttcctggcggtgtggctc
atggcctacggcgtagccaatcaggcgctgctctactcctacgatcctcgtcccggttgg
atcttccgccgagtgttctacaggccatacctgcacatatttggacatatccccattcat
gaaatggatgctgataaactggaggaggggatagagtgcaccaataacgtcaccctgatc
gaggcaggggccgagccctgcacgagtacctatgctaactggctggtggtcatcttattg
gtcatctttctgctggtcaccaacatcctgttggtcaacctgctcattgccatgttcagt
tacacattctccaaagtgcaggagcacagcgacacccactggaagttccagcgctacaac
ttgatcgcagagtaccactctagaccctgtctggctccacccttcatcatcctctcccac
ctccacctcttcatcaagagacacatccgcaggatcccctctgtcaagatcaaacacttt
gttctggatatccgtggcaggcaggccagtagactgaacacatgggaggccatccagaag
gagaatatactgtctgcccagaacaaacgagagcgagagaaagactccgagagactcaaa
cgcacctctgtcaaggtggacagtgtcctaaagcagatggcagagatccgggaccacggc
cacaggctaagaatactggaggcagagttggagtactgttctagtgccctctcctggatg
gtgcaggctctctctcagagtaacttgataaagcccacacgtcctccgcccactctccga
gatctaactctccaactagctgacccaagtctggagaataatgaaatctag
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