Oncorhynchus tshawytscha (Chinook salmon): 112260059
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Entry
112260059 CDS
T05605
Name
(RefSeq) transcription factor p65
KO
K04735
transcription factor p65
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04010
MAPK signaling pathway
otw04137
Mitophagy - animal
otw04210
Apoptosis
otw04218
Cellular senescence
otw04620
Toll-like receptor signaling pathway
otw04621
NOD-like receptor signaling pathway
otw04622
RIG-I-like receptor signaling pathway
otw04623
Cytosolic DNA-sensing pathway
otw04625
C-type lectin receptor signaling pathway
otw04920
Adipocytokine signaling pathway
otw05132
Salmonella infection
otw05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
112260059
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
112260059
09143 Cell growth and death
04210 Apoptosis
112260059
04218 Cellular senescence
112260059
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
112260059
04621 NOD-like receptor signaling pathway
112260059
04622 RIG-I-like receptor signaling pathway
112260059
04623 Cytosolic DNA-sensing pathway
112260059
04625 C-type lectin receptor signaling pathway
112260059
09152 Endocrine system
04920 Adipocytokine signaling pathway
112260059
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
112260059
09171 Infectious disease: bacterial
05132 Salmonella infection
112260059
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112260059
Transcription factors [BR:
otw03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
112260059
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
Motif
Other DBs
NCBI-GeneID:
112260059
NCBI-ProteinID:
XP_024290629
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All DBs
Position
LG10:27703892..27711566
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AA seq
613 aa
AA seq
DB search
MDGIYGWEQPPLNQGNPFIEIIEQPKQRGMRFRYKCEGRSAGSTPGEKSNDTTKTHPAIK
VHNYNGPLRVRVSLVTKNPPHKPHPHELVGKDCKHGYYEADLQERRVHSFQNLGIQCVKK
KDVAEAVSCRLQTQNNPFNIPEANMWEEFDLNAVRLCFQASITLPTGELCPLEPVVSQPI
YDNRAPNTAELKICRVNRNSGSCIGGDEIFLLCDKVQKEDIEVRFFQGSWEGKGTFSQAD
VHRQVAIVFCTPPYCDTNLTEPIRVKMQLRRPSDREVSEPMDFQFLPSDPDEYRLMEKRK
RTEGMLQNLKLGSLMSGTMPAETRPFNIARRTVTAKPAASQPVMNPVVPPSAFSVKPQPY
YNGPQPGKLFQTQPKAEASSTAAETWKFLNSLTLDSQPKATPVASFTTNPQASAATAASS
QAFPTVNLLDFNGFAFHNFACPQEPVSAAPTPEPTSTFGVQGSQFKVDEELPEFPSFSEA
QAPGTLDSINIEEFQAMLGQSCLAEEGPKSSEASAPQAPCHLPSTNTVANNAAQNQADPA
NHHTGCGGSTWMNYPNSIVSLLQNEGMMDSSPGNASQPAALDDLDVLSSMDEDRLMSILN
SGNQYSFVPGHQT
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atggatggaatttatggatgggaacagccccctttgaaccaaggtaatcccttcattgag
ataattgaacagcccaagcagaggggcatgaggttcaggtacaagtgtgaggggcgctct
gcgggaagcaccccgggagagaagagcaatgacaccaccaagacacaccccgccattaag
gtgcacaactacaatggccccctgcgtgtccgcgtctccttggtgaccaagaacccacct
cacaagccccacccccacgaactggtggggaaagactgcaaacatggttactatgaggca
gacctgcaggagagacgagtacacagttttcagaacctgggcattcagtgtgtgaagaaa
aaggatgtggccgaggcagtttcctgtaggctgcagacccaaaacaaccccttcaacatt
cctgaggcgaacatgtgggaggagtttgacctaaatgcagtgaggctgtgtttccaggcc
tcgatcactctgcctaccggggaactctgccctctggagcccgtggtgtcccagcccatc
tacgacaacagagcacccaacacagcagaactgaagatctgtcgagtgaacagaaactct
ggaagctgcatagggggggatgagatcttcttactttgtgacaaagtgcaaaaagaggac
atcgaggtgcggttcttccagggctcgtgggaggggaagggcaccttctcccaggcggac
gtacacaggcaggtggccattgtgttctgcaccccgccctactgcgacaccaacctgacc
gagccaatccgagtgaagatgcagctccgcaggccctcggatcgtgaggtcagcgagcca
atggacttccagttcctgccctcagacccagatgaatacagactgatggagaagagaaaa
cggacagagggaatgttacagaatctgaagctggggtccctgatgtcggggaccatgcca
gcagagacaaggccgttcaacattgccaggagaacagtcaccgccaagccagcagctagc
cagcctgtgatgaacccagtggtgccccctagtgccttctctgtgaagccccagccctac
tacaacggcccccagccaggcaagttgtttcaaacccagcccaaagcagaagcctcctcc
accgcagccgagacctggaagttcctcaacagcctgactctggactcccagcccaaagcc
acccccgtggccagcttcaccaccaacccccaggcctctgcagcgacagccgcctcctcc
caggcctttcccaccgtaaacctgttggacttcaacggattcgctttccacaactttgct
tgtccccaggagccggtgagtgcagcccctacaccagagcccacctctaccttcggggtc
caagggtcccagttcaaggtggatgaggagctacccgaattccccagcttttctgaggca
caagcgccagggactctagatagtataaacattgaagaattccaggctatgctgggccag
agttgtctggctgaagaagggccaaagagcagtgaggcgtcagcccctcaggcaccctgc
cacttaccctccaccaacactgtggccaacaacgcggcccagaaccaagcagacccagcc
aaccaccacaccggctgtggcggcagcacctggatgaactaccccaacagcattgtcagc
ctgctccagaacgagggcatgatggacagttcccccggcaatgccagccagccggccgcc
cttgacgacctggacgtcttaagctccatggacgaagaccgtctcatgtccatcctgaac
agtggcaaccaatacagttttgtgcccggacatcagacctaa
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