Oncorhynchus tshawytscha (Chinook salmon): 112260647
Help
Entry
112260647 CDS
T05605
Name
(RefSeq) stromal cell-derived factor 1
KO
K10031
C-X-C motif chemokine 12
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04060
Cytokine-cytokine receptor interaction
otw04672
Intestinal immune network for IgA production
otw04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
112260647
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
112260647
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
112260647
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
otw04052
]
112260647
00536 Glycosaminoglycan binding proteins [BR:
otw00536
]
112260647
Cytokines and neuropeptides [BR:
otw04052
]
Cytokines
Chemokines
112260647
Glycosaminoglycan binding proteins [BR:
otw00536
]
Heparan sulfate / Heparin
Chemokines
112260647
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IL8
DUF5580_M
Motif
Other DBs
NCBI-GeneID:
112260647
NCBI-ProteinID:
XP_042178252
UniProt:
A0A8C8GCI0
LinkDB
All DBs
Position
LG01:48360431..48402236
Genome browser
AA seq
98 aa
AA seq
DB search
MDLKYLAVMAVLAVATYAPFSQAKPISLVERCWCRSTVNTVPQRNIRELKFLHTPNCPFQ
VIAKLKNHKEVCINPETKWLQQYLKNALNKMKTSKQTN
NT seq
297 nt
NT seq
+upstream
nt +downstream
nt
atggatttgaaatacttggcggttatggctgtgctcgctgtggcgacatacgctcctttc
tcacaagctaaacccatcagtctggtggagaggtgttggtgtcgttctacagttaacacc
gtcccccagcgcaacatccgagaactgaagttcctgcacacacccaactgccccttccaa
gtgattgccaagctgaagaaccacaaggaggtttgtatcaatcccgagaccaagtggctg
cagcagtacctgaagaacgccctcaacaagatgaagacatccaagcagaccaactag
DBGET
integrated database retrieval system
