Oncorhynchus tshawytscha (Chinook salmon): 112261291
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Entry
112261291 CDS
T05605
Name
(RefSeq) mineralocorticoid receptor-like isoform X1
KO
K08555
mineralocorticoid receptor
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112261291
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
otw03310
]
112261291
Transcription factors [BR:
otw03000
]
Eukaryotic type
Zinc finger
Cys4 estrogen receptor-like
112261291
Nuclear receptors [BR:
otw03310
]
3. Estrogen like
3C. 3-Ketosteroid receptor
112261291
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
112261291
NCBI-ProteinID:
XP_042168023
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Position
LG34:14227836..14325630
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AA seq
1041 aa
AA seq
DB search
METKRYPSFFEGSTDTEKNRWSHVPSSAMDYCCSGAEEADSLNLNSNSDVLMDIVNVSCS
PSSNTADSKESNNNNEEKKKPEQQPTLKLTPNQHQPFVLPLFNRSLHGRKPEMMDSKELS
KTVAESMGLYMNAAREATDFGGFGQQGGHCSPGKMYPAGVCGRSCLEDSQCAASTGSPKL
MSPSTGFLKQPSSTPGDCCSSGTPSGSAVLGLSLSCSPQAPSSISSPGGSNNLVSSTTSP
TCFGGPFACTTISNPVNQHNAAGPALAHNHVHRRNSATCSPAGSSTVGSPPLTSPLNVMR
SPISSPQSMSSVRSPPSCSTSTNMRSSSVSSPTGSTNNMRASSSISSPTTGGPMAMSSSP
RNPSGGGGGFAVSSPASELGMVQNDSNSPEGRRDQQDFKEFEFPKVESVDGEMFNVGLDH
MGMVKFIKNEPDTDYRSMCLGNGSNNTKCNQASGCPGNGSPFITQIKSEPNKDGGGCMNP
QCYTEQQQQHSMGLFQSGPSEITYLSLRDNIDEYSLSGILGPPGTEMNGSYEAGVFPHNL
LSKVKQENNDGSYYQENNNNVVPTSAIVGVNSGGHSFHYQIGAQGTMSFSRHDPRDHGTN
PLLNLISPVTALMESWKSRPGMSQGPRGEGYPGHGCMPDSMSSASLRHPSSTAKVCLVCG
DEASGCHYGVVTCGSCKVFFKRAVEGRKSQHNYLCAGRNDCIIDKIRRKNCPACRVRKCL
QAGMNLGARKSKKLGKLKGVNEDSTPTKEGGQTCPGSGGGYLSSGEKELSTSPTNALVPH
GPGGGLVTPYLPPSICSVLELIEPEVVFAGYDNTQPDTTDHLLSSLNQLAGKQMIRVVKW
AKVLPGFRGLPIEDQITLIQYSWMCLSSFSLSWRSYKHTNGQMLYFAPDLVFNEDRMQQS
AMYDLCLGMRQVSQEFVRLQLTYQEFLSMKVLLLLSTVPKEGLKNQAAFEEMRVNYIKEL
RRSVGKATNNSGQTWQRFFQLTKLLDAMHDLVGNLLDFCFYTFRESQALKVEFPEMLVEI
ISDQIPKVESGNTHTLYFHKK
NT seq
3126 nt
NT seq
+upstream
nt +downstream
nt
atggagaccaaaagatacccaagtttcttcgaaggatccacggacacagagaagaacaga
tggtcccatgtccccagcagtgccatggactactgctgcagcggagccgaggaggccgac
agcctgaacctgaacagcaacagtgatgtcctgatggacatagtcaatgtcagctgctcc
cccagcagcaacacagccgacagcaaggagagtaacaataacaacgaagagaagaagaag
ccagagcagcagcctactctcaaactgaccccgaaccaacaccagccttttgttctcccc
ctctttaaccgatccctccatgggaggaagccagagatgatggactccaaggagctgtcc
aaaactgtggctgagtccatgggcttgtatatgaacgcggccagggaggccacagacttt
ggcggcttcggccaacaggggggtcattgtagtccggggaagatgtacccagcgggagtt
tgcgggcgctcctgtctcgaggacagccagtgtgctgcgtccacggggagccccaagttg
atgtccccttctacggggttcctgaagcagcctagctccaccccaggggattgctgctca
tctggaaccccatcagggtcagccgtcttgggcttgtctctgtcctgcagcccccaggcg
cccagctccatctccagccccgggggcagcaacaacctagtttcgtccaccaccagcccc
acctgctttggggggccgttcgcctgtacgaccatcagtaaccccgtcaaccagcataac
gctgccgggccagctctggcccacaaccacgtccacagaaggaactcggccacctgcagc
ccggcaggctccagcacggtggggtcgcctccactcaccagccccctcaacgtgatgcgc
tcacccatctccagcccacaaagcatgagcagcgtgcgctccccaccgtcatgcagcacc
tctaccaacatgaggtcatcgtctgtctccagccccactggcagcaccaacaacatgagg
gcttcatcgtctatctccagtccgaccaccgggggccccatggcaatgtcctcgagcccc
aggaacccctctggcggtgggggtggttttgctgtgtccagccctgctagtgaactgggc
atggtccagaatgactccaacagtcccgagggacgaagagaccagcaggacttcaaggag
tttgagttccccaaggtggagagcgtggacggggagatgttcaacgtaggcctggaccac
atgggtatggtaaagttcatcaagaatgaacccgacacggactataggagcatgtgtctg
ggtaatggtagcaacaacacaaagtgtaaccaggccagcggctgccccggcaatggctca
cctttcatcacacagataaaaagtgagccaaacaaagatggcggcggatgcatgaatcct
cagtgctacactgagcagcagcagcaacactctatgggtctcttccagtcaggtccgtcc
gagattacctacttgtctctgagggacaacattgacgaatacagtctctctgggatcttg
ggacctccgggcacggagatgaatggcagttacgaagccggcgtgttcccccacaacctc
ctgtctaaagttaaacaagagaacaacgatggcagctactaccaagagaacaacaacaat
gttgtgcccacctcggccattgtgggtgttaattcaggcggacactcgtttcactaccag
atcggagcacaggggacaatgtctttctcacggcatgacccaagggatcacgggacgaac
cccttgttgaatctaatttcgcctgttaccgcgttaatggagtcgtggaaatctcggccc
ggcatgtcgcagggtccaagaggagagggctatccaggtcacggctgcatgccagacagc
atgtcaagcgcgtcgctgagacacccgtcgtccacagccaaagtgtgtctggtttgcggg
gacgaggcgtcgggatgtcactacggggttgttacatgcggcagctgcaaggtcttcttc
aagagagccgtagaaggtaggaaaagccagcacaactacctgtgtgccggaagaaatgac
tgtatcatcgataagatccggaggaaaaactgtccggcctgtcgagtacggaagtgtctc
caagccgggatgaatctcggagcgcggaagtcgaagaagctaggcaagctgaagggtgtg
aacgaagactcgacccccactaaagagggggggcagacgtgccctggatccggagggggg
tacttgtcctcaggagagaaggagctgagcaccagccccactaacgccctggtgccccac
ggccctggaggtgggctggtgaccccctacctgcccccctccatctgcagcgtgttggag
ctgattgagccagaggtggtgtttgcgggctacgacaacacccagcctgacaccaccgac
cacctgctgtccagcctcaaccagctggctgggaaacagatgatccgcgttgtcaagtgg
gccaaagtacttccaggtttccggggcctgcccatagaggaccaaatcaccctgatccag
tactcttggatgtgtctgtcctccttcagtctcagctggaggtcctacaaacacaccaac
ggacagatgctctacttcgcccccgacctcgtcttcaacgaggaccgcatgcagcagtca
gccatgtacgacctgtgtctgggcatgaggcaggtgagccaggagtttgtcaggctgcag
ctcacctaccaagagttcctctccatgaaagtgttgctgctgctcagcacagttcctaaa
gagggtctaaagaaccaggcagcgtttgaggagatgagagtgaactacatcaaggagctg
aggaggtctgtgggcaaggccaccaacaactctggacagacgtggcaacgcttcttccag
ctcaccaagctactggacgccatgcatgacttggtggggaacctgctagacttctgtttc
tacacgttccgtgagtctcaggctctgaaggtggagtttccagagatgctggtggagata
atcagtgaccagataccaaaggtggagtcgggcaacacacacaccctctacttccacaag
aagtga
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integrated database retrieval system
