Oncorhynchus tshawytscha (Chinook salmon): 112262381
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Entry
112262381 CDS
T05605
Name
(RefSeq) F-box/WD repeat-containing protein 7 isoform X1
KO
K10260
F-box and WD-40 domain protein 7
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
112262381
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112262381
04121 Ubiquitin system [BR:
otw04121
]
112262381
Membrane trafficking [BR:
otw04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
112262381
Ubiquitin system [BR:
otw04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
SCF complex
Target recognizing subunit (F-box)
112262381
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
F-box-like
ANAPC4_WD40
Nup160
NBCH_WD40
F-box
Ge1_WD40
CDtoxinA
eIF2A
WD40_like
PQQ_2
PALB2_WD40
Motif
Other DBs
NCBI-GeneID:
112262381
NCBI-ProteinID:
XP_042185615
LinkDB
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Position
LG11:complement(2400810..2600152)
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AA seq
765 aa
AA seq
DB search
MNQDLLSGGSRRGLGGRRGGPGAQRGNASSSARTPQGQQPGEEADEEEHMNRVVEDQEHQ
QSRVQPAASAGGEGVEEPWTSRQNGPQGDGEEEDGGGVPNEVNGGVTKGGRWMWEAERRQ
QGGDDDEEEEENNNSGSQQGEEEDEERTEGGERTGRDEEDEEEMDQDSDDFEHSEESGRE
EEEEEEEGEDGLHSPSLRSDASVPNNNLDQSSGCQHQSSPIKKKMKRKLDHGPEVRSFPS
GKKPCKGSEYPSATGLVPYPATPTTFGHIRTANGQGQHRRRITSIPSPTGLQEWLRTFQS
WSGPEKLMALDELIDSCEPTHVKHMMQVIEPQFQRDFISLLPKELALYVLSFLEPKDLLQ
AAQTCRYWRILAEDNLLWREKCREEAGIDEPLAFKKRKITKPGFTHSPWKCAYIRQHRID
TNWRRGDLRSPKVLKGHDDHVITCLQFCGNRIVSGSDDNSLKVWSAVTGKCLRTLVGHTG
GVWSSQMRDNIIISGSTDRTLKVWNAETGDCIHTLYGHTSTVRCMHLHEKTVVSGSRDAT
LRVWNVETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTN
RVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADST
VKIWDIKTGQCLQTLQGPHKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGEFIRNLVT
LESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFDVDMK
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaggatctgctgtcggggggcagcaggcggggcctggggggccggcgagggggc
ccgggggcccagcgaggtaacgcctcctcctcggcccggacgccccagggccagcagcct
ggagaggaggccgacgaggaggagcacatgaaccgggtggtggaggaccaagaacaccag
cagtccagagtccagcctgcggcctcggcagggggggaaggagtagaagagccgtggacc
tccaggcagaatggaccccagggagacggggaggaagaggatggaggaggagtacccaac
gaggtgaacggaggagtgactaagggcggccggtggatgtgggaggcggagcgacggcaa
caggggggggatgacgacgaggaggaggaagagaacaacaacagtggcagccagcaggga
gaggaggaggatgaggaaaggacagagggaggagagcgaacggggagggatgaggaggac
gaggaggagatggatcaggacagtgatgactttgagcattcggaggagagtgggagggag
gaggaagaggaggaggaggagggggaggatggcctccactcaccctccctcaggagtgat
gcgtctgtccccaacaacaacctggaccagtcctcggggtgccaacaccaaagctcaccc
atcaagaagaagatgaagagaaagttggaccatggcccagaggtccgatctttcccttca
ggaaaaaagccctgcaaaggctccgagtatccaagtgctacagggctggtcccctaccca
gccacccccaccacgtttgggcacatcaggacagctaatggtcaggggcagcacaggcga
cgtatcacctccatcccttctcccacgggtctccaggaatggctccggacatttcagagc
tggagtggcccagagaagctcatggcgctggatgagttgatcgacagctgtgagcccacg
catgtcaaacacatgatgcaggttattgagccgcagttccaacgcgacttcatctccctg
ctgcccaaagagttggccctgtatgtgctgtcgttccttgagcccaaggacctgctgcag
gccgctcagacctgtcgttactggaggatcctggctgaggacaacctcctctggagggag
aagtgccgggaggaggcaggcattgatgagcctctagccttcaagaagaggaaaatcacc
aagccgggcttcacccacagcccctggaagtgtgcgtacatcaggcagcataggatagac
accaactggaggagaggagacctccgatcacccaaggtgcttaagggtcatgatgaccat
gtcatcacctgcctccagttctgtggtaaccgcatcgtcagcggctctgacgacaactcg
ctcaaggtctggtcggctgtcacaggaaagtgtctgaggacgttggtgggccacacgggg
ggcgtgtggtcgtcccagatgagggacaacatcatcatcagcggctccaccgaccggacg
ctgaaggtctggaacgcggagacgggcgactgtatccacaccctgtacgggcatacctca
acggtgcgctgtatgcacctgcacgagaaaacggtggtgagtggttctcgcgacgccacg
ctgcgcgtgtggaacgtggagacgggccagtgtttacacgtcctcatgggccacgtggcg
gcggtgcgctgcgtccagtacgatggccgcagggtggtcagcggggcctacgacttcatg
gtcaaggtctgggaccccgagactgagacctgcctccacacgctgcagggccacaccaac
agagtctactcactacagtttgatgggatccacgtggtgagtggtagcctggacacgtct
atccgggtgtgggatgtggagacgggtaactgcatccacactctgacgggtcaccagtcc
ctcaccagcggcatggagctcaaagacaacatcctggtctcgggcaacgccgactccacc
gtcaagatctgggacatcaagacgggacagtgcctgcagacgttgcaaggtccccacaag
caccagagcgccgtgacgtgcctgcagttcaacaagaactttgtcatcaccagctcggac
gacggcacggtgaagctgtgggacctgaagacgggcgagttcatccgtaacctggtgacg
ctggagagcggcggcagcggcggggtggtgtggcgtatccgcgcctccaacaccaagctg
gtgtgtgccgtgggaagccgcaacggcaccgaggagacaaaactactggtgctagacttt
gacgtggacatgaagtga
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