Oncorhynchus tshawytscha (Chinook salmon): 112262439
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Entry
112262439 CDS
T05605
Name
(RefSeq) otoferlin-like
KO
K19949
otoferlin
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112262439
Membrane trafficking [BR:
otw04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
112262439
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
FerB
Ferlin_C
Motif
Other DBs
NCBI-GeneID:
112262439
NCBI-ProteinID:
XP_042185781
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All DBs
Position
LG11:17315097..17333251
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AA seq
1284 aa
AA seq
DB search
MKPVITDRNYFHLPYFERKPCIYIKSWWQDQRRRLYNANIMDNIADKLEEGLNDVQEVIK
TEKAYPERRLRGVLEDLGNGCSQFLTLANKDQNQTGRTKLDKERLKSCMRELESIGQQAK
TIRTQVKKNTVRDKIKLVQNFLQKLRFLADEPQHSIPDIYIWMMSNNKRIAYARVPSKDI
LYSGVDEETGKDCGKVKTIFFKLPGKKGFGAAGWTVQAKTEIYLWLGLNRQRKDFLSGLP
NGFEENKMLKGPGSQSAPPISLTYTMKQIFQLRVHMYQARSLFAADSSGLSDPFARVFFS
THSQVTEVLNETLCPTWDQLMVYDNVELFGEVGELRDDPPIIVIEIYDQDTVGKAEFMGR
TFAKPITKMADEHYGPPRFPPQLEYYQIYRGNCAAGEMLAAFELLQIGPHGKADLPPIDG
PTDMDRGPILPVPLGIRPVLSKYRIEVLFWGLRDLKRVNLVAVDRPRVDIECAGKGVQSS
LIQNYKKNPNFGTLVKMFEVDLPENELLHPPLNIRVVDCRAFGRYTLVGNHAVTTLRKFI
YRAADKHANNLNTQEEIIVNYEPEPTIKKMETMVKLDSGSDAVVKIEEDEKGGKKKKRKK
GGDEVEEEEFDESMLDWWSKYFASIETLMEILKAQEAAMADAEEKEDQDIAAEGGEIKPD
DSLVKGKRGKGKKEKKRAGPGDIPEKKKHNIDELQVYPKELENEFDNFEDWLHTFNLFRG
KAGDDDDQNMADEDRIIGKFKGSLCMYKVPVSDEMQREMGFDSNMGMFQNIPTNDPINVL
VRVYIIRATDLHPADINGKADPYIAIKLGKSDIKDKDNYISKQLNPIFGKSFDIEATFPI
DSTLTVSVYDWDLVGTDDLIGETKLDLENRYYSKHRAICGIPSKYAIHGYNVWRDPLKPT
QILAKLCKEGKLDGPHYGPGGRVKVANRVFMGPTEIEDENGLKKQTDEHLALTVLKHWED
IPRLGCKLIPEHVETRPLLNPDKPGIEQGRIEMWVDMFPKDMPAPGPAIDISPRKPKKFE
LRVIIWNTDEVILEDDDIFTGEKSSDIFVRGWLKGQQEDKQDTDVHYHSLTGEGLFNWRF
IYPFDYLQAEEKIVISKKESMFAWDETEYKIPARLNLQVWDADHFSADDFLGAIELDLNR
FPRGAKTAKQCSINMVLNEKDIPMVSIFKQMRIKGWWPFLARDENDEFELTGKVEAELQL
MTAEEAEKNPVGEGRNEPEPLEKPNRPDTAFLWFLMPFKAIKNLICNQYFWLTVKLVVAL
LLVLVLGLFIYSMPGYMAKKLMGV
NT seq
3855 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccggtcatcaccgacagaaactatttccacctgccttactttgagaggaagccg
tgtatttatatcaagagctggtggcaggaccagagaagaagactgtacaacgccaacatc
atggacaacatcgcagataaactggaggagggtctgaacgatgttcaggaggtcattaag
acagagaaggcctatccggaacgcagactgagaggggtcctggaggatctcggcaacgga
tgcagtcaatttctgactctggctaacaaagaccagaatcagactgggaggaccaagctg
gacaaggagagactcaagtcctgcatgagggaactggagagcataggtcagcaggctaag
accatcaggacgcaggtgaaaaagaacacagtgagagataagatcaagctggttcagaac
ttcctccaaaagctcaggttcctcgctgatgagccgcagcacagcatcccggacatctac
atctggatgatgagtaacaacaagcgtattgcctacgcccgtgtcccctccaaagacatc
ctgtactccggggtggacgaggagaccgggaaggactgtggcaaagtcaaaaccatcttc
ttcaagctacctggtaagaagggctttggggcagctggctggacagtgcaggctaagaca
gagatctacctgtggctgggtctgaaccgtcagaggaaggacttcctgtctgggctgccc
aacggcttcgaggagaacaagatgctgaaaggacctggctcgcagtctgctccccccatc
agcctcacatacacgatgaagcagatcttccagctgagggtccatatgtaccaggctcgc
agcctgtttgcagcagacagcagcggcctctcagaccccttcgccagggtcttcttctcc
acacacagccaggtcacagaggtgctgaatgagacactgtgccccacctgggaccagctg
atggtgtatgacaacgtagaactgttcggagaagtcggagaactgagggacgacccgcct
atcatcgtcatagaaatctatgaccaggacacggtgggcaaagcagagttcatgggcagg
accttcgccaagcctataaccaagatggcggatgaacactacggacctccacgtttccct
ccccagctagagtactatcagatctatagggggaactgcgccgctggagaaatgctggcg
gccttcgaactgctgcagattggtcctcatggtaaagctgacctgccacccatcgacggt
cccacagacatggaccgtggtcccatcctacctgtccctctgggcatcagaccagtcctc
agcaagtacaggatcgaggtgctgttctggggcctgagggacctgaagagggtcaaccta
gtcgcggtggacaggcctcgtgtggacatagaatgtgccggtaaaggagtccagtcttcc
ctcatccagaactacaagaaaaatcccaacttcggcaccctggttaagatgtttgaggtg
gatctgcctgagaacgagctgctccaccctcccctgaacatcagagtggtggactgcaga
gctttcggtcgttacaccctggtggggaaccatgctgtcaccaccctacgcaagttcatt
taccgggcagcagacaagcacgccaacaacttgaacactcaagaggaaatcattgtcaac
tatgagccagagcccaccatcaagaagatggagaccatggtcaagctggactctgggtct
gatgctgtggttaaaatcgaggaggatgagaaaggagggaagaagaagaaaaggaagaag
ggaggagatgaggtggaggaggaggagtttgatgaaagcatgttggattggtggtccaag
tactttgcttcgatcgaaactctgatggagattctcaaggctcaggaggcagctatggcg
gatgctgaggagaaagaggaccaggatattgctgctgagggcggagagatcaaacctgat
gactctcttgtcaaaggaaagagaggcaagggaaaaaaggagaagaagagggctgggcct
ggagacataccagagaagaaaaagcacaacattgatgagctacaggtgtaccccaaggag
ctggagaatgagtttgataactttgaagactggcttcacaccttcaacctgttcagaggg
aaggccggagacgacgacgaccagaacatggcggatgaagacaggattattggcaaattc
aaaggttctctgtgcatgtacaaagtgccggtgtcagatgagatgcagcgggagatgggc
tttgactccaacatgggcatgttccagaacattccaactaatgacccaatcaacgtccta
gtccgggtctatatcatcagggctactgacctgcacccagcggatatcaatggaaaagca
gatccatacatcgctataaaactgggcaagtcagatatcaaagacaaagataactacatc
tccaaacaactcaaccctatctttggcaaatcctttgacatcgaggccacatttcccatc
gactccacactaacagtgtccgtctatgactgggatttagtgggcactgacgacctgatt
ggggagactaaactggatctggagaaccgttactacagcaaacacagagcaatatgtggc
atcccatctaaatatgccatccatggatacaacgtgtggcgggaccccctgaagccgacc
caaatcctggccaagctgtgtaaggagggtaagctggacgggccacactacggccctgga
ggacgggtcaaggtggccaaccgggtcttcatgggcccaactgagatcgaagatgaaaat
ggtctgaagaagcagacggatgagcacctggccctgacagtgctgaagcactgggaggac
atccccaggttgggctgtaaactgattccagaacatgtggagaccaggccactcctcaat
cctgacaagcctgggatcgaacaggggaggattgagatgtgggtggacatgttccccaag
gatatgcctgcacctggacctgccattgatatttcacccaggaaaccaaagaagtttgaa
ctgagggtgatcatctggaacacagacgaggtcattctggaggatgatgacatcttcact
ggagaaaagtctagtgatatcttcgtgcgaggctggctgaaaggtcagcaggaggacaag
caggacacagacgtccactaccactccctgacaggggagggtctcttcaactggcgcttc
atctacccctttgactacttgcaggccgaggagaagatcgtcatctctaagaaggagtcc
atgttcgcctgggacgagactgagtataagatccctgctcgactcaacttacaagtctgg
gatgctgatcacttctctgcagatgattttttaggcgccattgagctagacctgaaccgt
ttccctcgtggagcgaagacagccaagcagtgttccatcaacatggtgctgaatgaaaag
gacattcccatggtgtccatcttcaaacagatgaggatcaagggctggtggcccttcctg
gccagagatgagaacgatgagtttgaactcacggggaaagtggaagccgagctgcagctg
atgactgcagaggaggctgagaagaacccagtgggggaaggacgcaatgaacctgagccc
ctggagaaacccaaccgaccagacacagccttcctatggttcctcatgcctttcaaagcc
atcaaaaacctcatctgcaaccagtacttctggctcacggtcaagttagtggtggccctg
ctgctggtgctcgtcctgggcctcttcatctacagcatgcccggatacatggccaagaaa
ctaatgggtgtctga
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