Oncorhynchus tshawytscha (Chinook salmon): 112265090
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Entry
112265090 CDS
T05605
Name
(RefSeq) fukutin-related protein
KO
K19873
fukutin-related protein [EC:2.7.8.-]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw00515
Mannose type O-glycan biosynthesis
otw01100
Metabolic pathways
Module
otw_M00872
O-glycan biosynthesis, mannose type (core M3)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00515 Mannose type O-glycan biosynthesis
112265090
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
otw01003
]
112265090
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112265090
Glycosyltransferases [BR:
otw01003
]
Glycan extension
O-Glycan
112265090
Membrane trafficking [BR:
otw04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
112265090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FKRP_N
LicD
TauE
Motif
Other DBs
NCBI-GeneID:
112265090
NCBI-ProteinID:
XP_024297898
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Position
LG13:complement(51161630..51165772)
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AA seq
535 aa
AA seq
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MRVSFCQGLLTGAIVLNLLILYYVSRAQQQMMEKRRDPGRGSRKAALPASGLGGGMGGLV
GVGGGMVGPGGVGGEGNSHGPRVTVLLREFEDFENYVGDVARSFLHQRPELPFLAVSDTP
PYPPLSLPDGARLLVLSPSPEQPPQAHRPEFHVQTEFVLLVPDGVELEQGRAVERLIREL
EGEGGGPVRLVAAPVLARSAVQCLHLRVSLREWTATYTPAASGSSGSVCTALQGDAVVLI
RSEDLFNLSVPLGRPLLPSLFIQTSLHGWKVKLLESPCFSASHRPLFSSAHNQWKADSHL
KEATSQLMRNFGLKRLLLADGKEQWHGCGKETARCFGTVRDDTPEYLYLDRWTPPCCLRA
LRETTKYVINILESSGVRYWLEGGSLLGAARHQDIIPWDYDVDLGIYLEDVPNCDYLKNL
DSGSLVDANGYVWERAVEGDFYRVQYSEANHLHVDLWPFYPRNGVMTKDTWMEHKQDVEF
PEHFLQPLVPMPFAGVTAYGPNNHRAFLELKFGEGVIENPQYPNPAKKRLDRSRL
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atgcgggtgagtttctgccagggccttctgactggagccattgttctgaacctgctcatc
ctctactatgtgtcccgagcccagcagcagatgatggagaaacgccgggacccaggaagg
ggctccaggaaggctgctttacctgcgtccgggctggggggcggcatggggggcctggtg
ggggttggcggggggatggttggccctggaggtgtcgggggagaggggaacagccacggc
ccccgtgtgactgtcctcctacgggagtttgaggactttgagaactatgtcggtgatgtg
gcacgctccttcctgcaccagagacctgaactgcccttcttggctgtgtctgacaccccg
ccctatccccctctgtctctccccgatggggcccgtctcctggtgctctcccccagcccc
gagcagcctccgcaggcccaccggccagagttccacgtccagacagagtttgtgctgctg
gtgcctgacggggtggagctggagcagggccgggctgtggagaggctgatccgggagctg
gagggggaaggtggggggcccgtgaggctggtggcggcccccgtgttggcgcgctcggcc
gtccagtgcctgcacctacgggtcagtctgagagagtggacggccacctacaccccagca
gcgtctgggagcagtggtagcgtgtgtacagcccttcagggggacgcggtggtcctcatc
cgctccgaggacctcttcaacctgtctgtcccactggggaggcccctgctgccctcgctc
ttcatccagacctccctgcatggctggaaggtcaagctcctggagagcccctgcttctcc
gccagccaccggcctctcttcagctcagcccacaaccagtggaaggccgacagccatctg
aaggaggccactagccagctgatgaggaactttgggctgaagcgtctcctactggctgat
gggaaggagcagtggcacggctgtgggaaggagacggcgcgttgcttcggtacggtccgg
gacgacacccctgagtacctgtacctggatcgctggacccctccatgctgcctgcgcgcc
ctacgtgagaccaccaagtatgtgatcaacatcctggagagctccggggtgcgctactgg
ctggaaggaggctccctgctgggggcggcccgccaccaggacatcatcccctgggactat
gatgtggacctgggcatctacctggaggacgtgcccaactgtgactacctgaagaacctg
gattctggttctctggtggatgctaacggctatgtgtgggagcgggcagtggagggggac
ttctacagggtgcaatacagcgaggctaaccacctccacgtggacctgtggcccttctat
ccgcggaacggcgtcatgaccaaagacacgtggatggagcacaagcaggatgtggagttc
cccgagcacttcctgcagccgctggtgccgatgccgttcgccggcgtcaccgcctacggc
ccgaacaaccaccgcgccttcctggagctcaagtttggggagggggtcatcgagaacccc
cagtaccccaatcctgccaagaagaggctggacaggagccggctgtga
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