Oncorhynchus tshawytscha (Chinook salmon): 112265427
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Entry
112265427 CDS
T05605
Name
(RefSeq) integrator complex subunit 4
KO
K13141
integrator complex subunit 4
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
otw03041
]
112265427
Spliceosome [BR:
otw03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
112265427
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Gene cluster
GFIT
Motif
Pfam:
HEAT
INTS4_8HBD
HEAT_2
PDS5
VPS15-like_hel
Adaptin_N
INTS7_N
DUF4042
RMI1_C
TRS130_4HB
HEAT_GCN1
Motif
Other DBs
NCBI-GeneID:
112265427
NCBI-ProteinID:
XP_042152024
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All DBs
Position
LG13:60955091..60963995
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AA seq
442 aa
AA seq
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MIGGGASGVSGGVCVRDAQSVISDYFSNQDPRVRTAAIKAMQVRLVDDSFGKISHVVSDG
SWVVRVQAAKTLSNMLQVSPQFLEQTLDKKLMSDLRRKCTAHERAKELYASGEFSSGRKW
ADDAPKEKVDTSAVNLIASGACGAFVHGLEDEMYEVRIAAVDAFSALAQSSASFAEMCLD
FLVDMFNDEIEAVRLQSIHILRQISINTLREDQLDTVLAVLEDSSRDIREALHELLCFTN
VSTKECIQLALLELLKNLTKYPTDRNSVWKCLKFLGCRHPTLVLPLVPELLSTHPYFHTP
EPDMDGPAYIAVLVLVFNAAQSCPTMTALFSDHTFRHYTYLRDSLSHLVPPLRLPGRKQA
PGGSGIEGSRSVESAQLFLQQSLSRVSTIQNLQDPGAQDLLNFTIRDLQRLGELQTELAG
AADFLPPTSAANYCSPRCLSGC
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgattgggggcggtgcttcaggggtgtctggcggagtgtgtgtgagagatgcacagagc
gtcatcagtgactacttttccaaccaggacccaagggtgcgcacagcggccatcaaagcc
atgcaagtccgcctggtcgacgactcgtttgggaagatcagtcacgtggtctctgatgga
tcctgggtagtcagggtgcaggccgccaaaacactgagtaacatgttgcaagtcagtcct
caattccttgagcagactctggacaagaaactgatgtcagacctcaggaggaaatgtact
gctcatgagcgggccaaggagctctatgcgtctggtgagttctcctcggggaggaaatgg
gctgatgatgctcccaaggagaaggtggacacctccgctgtcaacctgatcgcctccggg
gcctgcggagcctttgtacacggactggaggacgaaatgtacgaggtgcgtattgctgct
gtggatgccttctctgctctcgcccaatcatctgccagctttgctgagatgtgcctggac
ttcctggttgacatgtttaacgatgagattgaggcggtcaggctgcagtccatccacatc
ctcagacagatctctattaacacccttagagaagaccagctcgatactgtactagctgta
ctagaggactcgtctcgtgacatcagagaggcgctacatgagttgctgtgtttcaccaat
gtgtcgactaaagagtgtatacaactggctctgctggagctgctgaaaaatctcaccaag
taccccactgaccgcaactctgtctggaagtgtctaaagtttctaggttgtcgtcatcct
accctggtattaccgctggttccagagctgctcagtactcacccttacttccacacccct
gaaccagacatggacggccctgcctatattgcagtgttggtgctggtgttcaacgcagct
cagtcttgtcccaccatgacagctctgttctcagaccacacctttagacattacacctac
ctacgggacagcctctctcacctagtacctcctctcaggttaccagggaggaagcaggcc
ccaggtgggagtggtatagaaggttccaggagtgtggagtctgctcagctgttcctccaa
cagagtctgagcagagttagcaccatacaaaacctacaggaccccggggctcaggacctg
ctaaactttactatcagagatctacagagactgggggagctacagacagagctggcaggg
gctgctgactttttgccacctacctccgctgccaactactgctcaccaaggtgtctctct
ggatgctga
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