Oncorhynchus tshawytscha (Chinook salmon): 112265587
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Entry
112265587 CDS
T05605
Symbol
psen2
Name
(RefSeq) presenilin-2
KO
K04522
presenilin 2 [EC:3.4.23.-]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
112265587 (psen2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
otw01002
]
112265587 (psen2)
Peptidases and inhibitors [BR:
otw01002
]
Aspartic peptidases
Family A22: presenilin family
112265587 (psen2)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Presenilin
DUF6541
Oxidored_q3
Motif
Other DBs
NCBI-GeneID:
112265587
NCBI-ProteinID:
XP_024298828
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All DBs
Position
LG02:60734640..60751171
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AA seq
450 aa
AA seq
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MSTSDSEEDSYNERTALVASEIPSVPSYQQDPDQPQPADMEPRRRTVAPEPAAEPPSLDR
SAVEREPVDLEEEEELPLKYGAKHVIMLFVPVTLCMVVVVATIKSVSFYTEKNGQQLIYT
PFTEDTDTVGERLLNSVLNTIIMISVIVVMTIFLVVLYKYRCYKFIHGWLILSSLMMLFW
FSFMYLGEVFKTYNLAMDYPTVAMIIWNFGVVGMICIHWKGPLQLQQAYLIAISALMALV
FIKYLPEWSAWVILGAISVYDLVAVLCPKGPLRMLVETAQERNEPIFPALIYSSAMIWMV
GMANPARHAEPTNQDTGSSDEEAHRSEGSALARDWVEPETQVSSGMNRSYSTEDDLDEED
RGVKLGLGDFIFYSVLVGKAAATGGDWNTTLACFVAILIGLCLTLLLLAIFKKALPALPI
SITFGLVFYFSTDNLVRPFMDNLAAHQFYI
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgagtacctcggacagtgaagaggactcctacaatgagaggacagctctggttgcatcc
gagataccttctgtgccatcttaccaacaagaccctgaccaaccacagcctgcagacatg
gagcccaggcgccgcacagtggccccagagcctgcagctgaaccccccagcctggacagg
agtgccgtggagcgggagcccgtagacctggaggaagaggaggagctccccctcaagtac
ggcgccaagcatgtcatcatgctgttcgtccccgtcaccctttgcatggtggtcgtcgta
gccaccatcaagtcggtcagcttctacactgagaagaacggacagcagctgatctatacg
ccgttcacagaggacacagacacagtgggcgagcggctcctcaactcagtgctcaacacc
atcatcatgatcagcgtcatcgtggtcatgaccatcttcttggttgtgctctacaagtac
cgctgctacaagttcattcacggatggctcatcctgtcctcgctgatgatgctcttctgg
ttcagcttcatgtacctgggggaggtatttaaaacctacaacttggccatggattaccca
acagtagccatgatcatctggaactttggggtggtaggaatgatctgtatacactggaag
gggcctctgcagctgcagcaggcctacctcattgccatttcggccctcatggccctggtg
ttcatcaagtacctgcccgagtggtccgcctgggtcatcctgggagccatctccgtctac
gatttggttgcggtcttgtgccctaaaggtcctctcaggatgcttgtagagaccgcacag
gagcgtaacgagcccatcttccctgctctcatatattcatctgccatgatatggatggtt
gggatggccaacccagcaaggcatgcagagcccacaaatcaagatacaggttcctcagat
gaagaggcacatcggagtgagggcagcgccctggcgagggactgggtggagccagagact
caagtgtcctcagggatgaacaggtcctactcaaccgaggacgacctagacgaggaagac
agaggagtcaagctgggactgggggacttcatcttctacagtgtgctggtggggaaggct
gccgccaccggaggagactggaacaccacgctggcctgcttcgtggccattctcatagga
ctctgcctcactcttctgctgctggccatattcaagaaggccctcccagctctccctatc
tccatcaccttcggcctggtcttctacttctctacagacaacctggtccgcccctttatg
gacaacctcgctgcccaccagttctacatctga
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