Oncorhynchus tshawytscha (Chinook salmon): 112265628
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Entry
112265628 CDS
T05605
Name
(RefSeq) collagenase 3
KO
K07994
matrix metalloproteinase-13 (collagenase 3) [EC:3.4.24.-]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
otw01002
]
112265628
Peptidases and inhibitors [BR:
otw01002
]
Metallo peptidases
Family M10
112265628
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GFIT
Motif
Pfam:
Peptidase_M10
Hemopexin
PG_binding_1
Reprolysin_3
Reprolysin_5
Peptidase_M66
DUF4953
Motif
Other DBs
NCBI-GeneID:
112265628
NCBI-ProteinID:
XP_024298909
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All DBs
Position
LG13:70803536..70807852
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AA seq
471 aa
AA seq
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MPPRQDKMEITGLLLLVVVAQSFAMPLSSLEETDEWLLAEKYLRRFYNLRAGLQGTPTHR
SSDAMQAKVREMQSFFNLQVTGSLDTNTLELMSMARCGVPDVGEYNHFPRHLKWQNTNVT
FRIVNYTPDLMKADVDRAIHNALNIWADVTPLTFKKLHEGKADIMIAFGTKEHGDFNPFD
GPDGLLAHAYPPGRDIGGDTHFDEDEHWSIDSDAYNLFLVATHEFGHALGLSHSSDPGAL
MYPIYSYSQGYPLSEDDITGIQALYGPNPNDSKVKPKPDAPNKCDPMLSFDAVTELRGET
IIFKDRFYWRLHPQFAEPEQTLIKSTWPSLPNKVDAAYEYPEKDMVFIFSGIRMWALNGY
SLVEGYPKYIHKLGLPKTVRRVDAAVYIPDTGKTLLFSEEQFWSYDEKTNTMDSGFPRSI
EMDFPGMGDEVDAALYKYGYLHFFHEHTQFEYSYSARKVIQIVRTNSFLNC
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgccaccaagacaagacaagatggaaatcacaggtttactgctccttgtggtggttgct
cagtcatttgctatgcctctgtcatcactggaggagactgacgagtggctattagccgag
aaatacctccgtaggttctacaaccttcgagctggacttcagggaaccccgacccacagg
tcgtcagacgccatgcaggctaaggtcagggagatgcagtccttcttcaacctccaagtg
acggggagcctggacactaacaccctggaactgatgagcatggccaggtgtggtgtccct
gacgtgggggaatacaaccacttcccccgacacctcaaatggcagaacaccaatgtgacc
ttcagaatagtgaattatactcctgatctgatgaaggcagatgtggacagagctatccat
aatgccttaaacatctgggctgatgtcacgcctctgaccttcaagaaactgcacgagggg
aaggctgacatcatgatagcatttgggacaaaagaacatggagacttcaacccctttgac
ggccctgacggtctcttagcccatgcctatccccctggcagagacattggaggagacaca
cactttgatgaagatgaacattggtcaatagactcagacgcctacaaccttttcctggtc
gccactcatgagtttggccatgcccttggcttgtcccattcttccgatcctggagctctg
atgtacccaatctactcctacagccagggttatccactgtctgaggatgatatcaccggc
attcaagctctttatggcccgaaccccaatgacagcaaagtgaagcccaagccagatgcc
ccaaacaaatgtgaccccatgttgagttttgatgctgtcactgagctcagaggagaaaca
atcatcttcaaagacaggttctactggcgtctccatcctcagtttgcagagcctgagcaa
accctgatcaaatccacctggccctccctccccaacaaagtggatgctgcctatgagtac
cctgagaaagacatggtcttcatattcagtggtattagaatgtgggccctgaatggctac
agcctagtggagggctaccccaaatacatccataaactgggactccccaagaccgtgcgg
agggtggatgctgctgtgtacatcccagacaccggcaagacccttctgttctctgaagag
cagttctggagttatgatgagaagactaacacaatggacagtggcttcccaagatccatt
gagatggatttccctggaatgggagatgaggtggatgctgccttatataaatatggatat
ttgcatttcttccatgaacatacacagtttgaatacagctacagtgcaaggaaggtgatt
cagattgttaggacaaactcttttctcaactgctga
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