Oncorhynchus tshawytscha (Chinook salmon): 112266529
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Entry
112266529 CDS
T05605
Name
(RefSeq) zinc finger protein GLI2
KO
K16798
zinc finger protein GLI2
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
112266529
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112266529
Transcription factors [BR:
otw03000
]
Eukaryotic type
Zinc finger
Cys2His2 GLI-like
112266529
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_15
zf-C2H2
zf-H2C2_2
FOXP-CC
Zap1_zf1
zf-C2H2_4
Motif
Other DBs
NCBI-GeneID:
112266529
NCBI-ProteinID:
XP_024299854
UniProt:
A0A8C8BZU3
LinkDB
All DBs
Position
LG14:complement(10312075..10400089)
Genome browser
AA seq
1523 aa
AA seq
DB search
MSRMETSAPTTTEKKGSGLDGNGFTDLPRKLSPSAVTRAPHHVFPTFHTPIPIDMRHHEG
RYHYEPHTLHAMHGPGLGGSPVMSDISLIRLSPHAAGTGESPFSPAHPYFNPHMEHYLRS
IHSSPTLSMISAARGLSPADLAHEHLKERGLFGFPPPPPGASPAEYYHLMTSHRNPYGEL
LMQGGAAAAAHLPDYITPMEASRFPSPRLTPRLNRKRALSISPLSDASIDLQTMIRTSPN
SLVAYINNSRSSSAASSSYGHLSVGGISPSFTFPHHINPMAYQQLLSQQRGLSVFGHTPP
LIQPPPIFSSRQSALGLSSLPPASHNHNNGSQSKNTCGDSAVSSTVNPMITKRSKVKTEV
EYPRPLSPCSPDHLGGMLGLKEDLDKDECKHEPEMVYETNCRWEGCSKEYDTQEQLVHHI
NNDHIHGEKKEFVCRWDECSREQKPFKAQYMLVVHMRRHTGEKPHKCTFEGCCKAYSRLE
NLKTHLRSHTGEKPYVCDHEGCNKAFSNASDRAKHQNRTHSNEKPYVCKVPGCTKRYTDP
SSLRKHVKTVHGPEAHVTKKQRSDLPPSRPVPPKENGENETGRGTEEEMESTSRGMEDYL
QVKSIKTEKSVMYQSSPGGQSSCSSEPSPLGSSTNHDSGVEMALHSGGGSMGDLTGLDDP
SGPLMDSSFSGLSSGTAGVGVGLHLRQHLGLSHIHGLEHLKKEKLKTARDSCQWANHHPA
PPVQNTKLPPIPASGSLLESGNMGGGPGSFSLSELCSSKVTVLNQLDHLMERRDSATSTI
SSAYISRRSSGISPCYSSRRSSDASAFSGHRHHNISSTGSYDPISADLSRRSSDASQCGG
GGGGGRLPSHLSLTPAQHYHLKAKYAAATGGAPPTPLPNMERMSLKTCLALYRDASQGDS
SSGYSSFDPVVPSGVPRRCSGDMGNYNGRSMMPHEAPSNIPRRASDPVPRRPSLDPLSPL
SHQPQVQHYNSTGNMQNLHPHASLPNQALSAAERCHLVLQSHQPRSDDSLQRYPYCPRPP
SISENVAMETMAGDMSGRRNSSEEEMMVLPDDVVHYITAQGGAGESDCANGYNRQAQCGF
HGNTINPNPQQQQQFYHQGRMAVVDTNMSMNPSSAPQTKRLSCALSPGHPKQSFPSSLSK
TSTMPVQWNEVSSGTVEALHNPTQHLPFGRSNSNLAMVQQKQNFVSFQKQNLNSNQHIAQ
INHNLAHAAQQGRYIQQQKTDSRLGCVQQSLQQQQPANANLNERVRLEYGFNQGLGPIDA
NANANQRSSCSSMSVSGTVHSVDTQNSRLRTQPVGSQSSQVTFKDSGVNSSWMISHQQKY
NIASQVQHPIQNGGQILIQPRPPTEHKSLSRQHSGSMTIQRQNSIGNHCSNGNNTDNNVM
FYTGQIHVFGPNRNVNMQMMTSPVVDVLQCPSDSTETSMTSPGVNNQVSSTVDSSNGTGA
EDPQIDFDTMLDDGDHSSLMSGTISPSILQSLSQTSSRLTTPRNSVTLPSLPLPAGGSNM
AIGDMSSLLTALAEENKFLSMMS
NT seq
4572 nt
NT seq
+upstream
nt +downstream
nt
atgtccagaatggagacctctgccccgacgaccacagagaagaaaggctctggtctggat
ggaaacggcttcactgacctcccgaggaaactctcaccttcagctgtcaccagagccccg
caccacgtcttccctacgttccacacgcccatcccgattgacatgcgtcaccacgaggga
agatatcactatgaaccccacaccctacatgccatgcatggtcctggactaggtggcagc
ccggtcatgtcagacatctctctgatccgtctgtccccccacgcagccgggacaggggag
tcccccttcagccccgctcacccctacttcaaccctcacatggagcactacctccgctcc
attcacagcagcccaaccctgtccatgatctctgcggcccgcggactcagccctgcagac
ttggcacatgaacacttgaaagagcggggtctgtttgggtttccccctccccctcctgga
gccagccctgctgagtactaccacctgatgaccagccatcgtaacccctacggagagctg
ctgatgcaggggggtgcggcggcagctgcacacctgccagactacatcacccccatggaa
gcgtcacggttccccagtcccagactgacccccaggctgaacagaaagcgagccctgtcc
atctcgcctctctcagacgccagcatcgacctgcagaccatgatccgtacctcgcccaac
tctctggtggcctacatcaacaactcacgctccagctctgcagctagcagctcctacgga
cacctctctgttggaggcatcagtccgtcctttaccttcccccatcacatcaaccccatg
gcctaccagcaactcctgtcccagcagagaggcctgagtgtgtttggccacacccctcct
ctcatccagcccccacccatcttctccagtcgccagtctgccctgggtctctcctctctg
ccccccgcctcacacaaccacaacaatggctcacagtcaaagaacacatgtggggactcg
gcagtgagcagtacagtcaatcccatgatcaccaagaggtcaaaggtgaagacagaggtg
gagtatccgaggccgctgtccccatgctctccggatcatctaggtgggatgctgggcctg
aaggaggacttggataaagatgaatgcaagcatgagccagagatggtgtatgagaccaac
tgccgctgggaaggatgctccaaggagtatgacacgcaggaacaactggtccatcacatc
aacaacgaccacatccacggggagaagaaggagtttgtgtgccgctgggatgagtgttcc
agggagcagaagccttttaaggcccagtacatgctggtggttcacatgaggagacacacg
ggggagaaaccacacaagtgtacctttgagggctgctgtaaggcctattctcgcctggag
aatctgaagacccacctgcgatctcacaccggggaaaaaccgtatgtgtgtgaccacgag
ggatgcaacaaagccttctccaacgcctccgacagagccaagcaccagaatcgcacacac
tccaacgagaaaccctacgtgtgtaaagtccccggctgtacgaagcgctacacggacccc
agctctctcaggaagcacgtgaagacagtccacggaccagaggcccacgtcaccaagaaa
cagcgcagcgacctgccgcccagcagaccagtgccacccaaagagaatggagagaacgag
acaggccggggcacggaggaggagatggaaagcacctcgagaggcatggaggactacctg
caggtcaagtctatcaagacggagaagtctgtgatgtatcagtccagccctggtggtcag
tcgtcatgtagcagcgagccgtcgccacttggcagttccaccaaccatgacagtggagta
gagatggccctccacagcggcgggggcagcatgggggacctgactggactggacgacccc
tcggggcccctcatggactcctccttctctggcctctcgtctgggacagcaggggtcggg
gtgggcctccacctacgtcaacacctaggcctcagccacatccacggactagaacacctg
aagaaggagaaactgaagacggcgagggactcctgccagtgggccaatcatcatccagct
cctccagtccagaacaccaagctaccgcccataccagcaagcgggtcccttttggagagt
ggaaatatgggtggcgggcctggatcgttcagcctcagtgagctgtgttccagtaaggtg
actgtcctgaaccagctggaccatttgatggagcgcagagacagcgccaccagcaccatc
tcctctgcctacatcagccgccgctcctctggcatctccccctgctactccagccgccgc
tccagtgacgcctccgcattcagtggccaccgccaccacaacatcagctccaccggctcc
tacgaccccatctctgcagacctgtcccgccgctccagcgacgccagccagtgcgggggt
ggtggaggaggtggacggctgcccagtcacctcagcctcacccccgcccagcactaccac
ctcaaggcgaaatatgcggcggctacaggcggagccccacccacacctttacccaacatg
gagaggatgagtctcaagacctgcttggccctctacagggacgcttcccagggagactcg
tcgtctggttactcctccttcgaccccgttgtccccagtggggttcccaggcgctgcagc
ggcgatatgggaaactataacggccgcagcatgatgccccacgaagctccgtccaacatt
ccccgtcgggctagcgaccccgtcccccggcggccgtccctggaccctttgtccccgctg
tcccatcagcctcaggtgcagcactacaacagcacgggcaacatgcagaacctccaccca
cacgcctccctgccgaaccaggccctgtctgcagccgagcggtgccacctggtgctccag
agccaccagccgcgctccgacgacagcctgcagcggtacccctactgcccccggccgccc
agcatctctgagaacgtggccatggagaccatggccggcgatatgagcggtagacgcaac
agcagtgaggaggagatgatggtacttccggatgacgtcgttcactacatcaccgctcag
ggcggagctggtgagtcagactgtgccaacgggtacaaccgacaagcacaatgtggtttc
catggaaacacaataaaccctaacccccagcaacaacagcagttttaccaccagggaagg
atggctgtggtggacaccaatatgagtatgaacccttcgtctgcaccacaaaccaagcgc
ctctcctgtgccctaagcccaggccatccgaagcagtctttcccctcctcactcagtaag
acgagcaccatgccggtacagtggaatgaggtcagctcagggactgtggaagctcttcac
aacccaacccaacatctgccgttcggtcgaagcaactcaaacctcgccatggtccaacag
aaacagaactttgtctcgttccagaagcagaatcttaactccaaccaacacattgcacag
attaaccacaacctggctcatgcagcccagcaggggagatacatacagcagcagaagaca
gactccaggctgggctgtgtccaacagagcctacagcaacagcagcccgctaatgctaac
ctcaatgaacgagtgagactcgagtatgggtttaaccagggtctcggtcctattgatgct
aacgctaacgctaaccagcggtcctcctgtagtagtatgtcagttagtggcacagtgcac
agtgtagacacgcagaacagccgactgaggacgcagccagtggggagtcaatcgtctcaa
gtcacatttaaggatagcggtgtgaactcttcgtggatgatctcacatcaacagaaatat
aatatagcgtcccaggttcagcatcctatacagaatggaggtcaaatactcatccagcca
agaccgcccacagaacataagtctctaagcagacagcattcagggtcaatgacaatccag
cgacaaaactcaattggcaatcactgcagtaatggcaacaacacagacaacaatgttatg
ttctacacaggacagatacacgtgtttgggccaaacaggaacgtcaacatgcagatgatg
acatcaccagtagtggatgttcttcaatgtccctcagacagcactgagacctccatgacc
tcaccgggagtaaacaaccaggtctccagtacggtggactcgtccaatgggacaggggca
gaggatccccagattgactttgacaccatgctggatgacggggaccactccagcctgatg
tcaggcaccatcagccccagtatcctccagagtctgtcccagacctcctccagactcacc
accccccggaactctgtcaccctgccctccctgcccctccctgcagggggcagcaacatg
gccatcggcgatatgagctccctgctcaccgcgcttgcagaagagaacaagttcctcagc
atgatgtcataa
DBGET
integrated database retrieval system
