Oncorhynchus tshawytscha (Chinook salmon): 112266683
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Entry
112266683 CDS
T05605
Name
(RefSeq) fukutin-related protein isoform X1
KO
K19873
fukutin-related protein [EC:2.7.8.-]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw00515
Mannose type O-glycan biosynthesis
otw01100
Metabolic pathways
Module
otw_M00872
O-glycan biosynthesis, mannose type (core M3)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00515 Mannose type O-glycan biosynthesis
112266683
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
otw01003
]
112266683
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112266683
Glycosyltransferases [BR:
otw01003
]
Glycan extension
O-Glycan
112266683
Membrane trafficking [BR:
otw04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
112266683
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FKRP_N
LicD
Motif
Other DBs
NCBI-GeneID:
112266683
NCBI-ProteinID:
XP_024300136
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All DBs
Position
LG14:complement(20573974..20576848)
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AA seq
535 aa
AA seq
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MRVSFCQGLLTGAIALNLLILYYVSQAQQQMMEKRRDPGRGSRKAALPATGLEGGMGGLV
VVGAGMVGAGGVGGEGNSHGPRVTVLLREFENFENYVGDVARSFLHQRPELPFLAVSDTP
PYPPLSLPEGARLLVLSPSPEQPPQAHRPEFHVQTEFVLLVPDGVELEQGRAVERLIREL
EGEGGGPVRLVASPVLARSTVQCLHLRVSLREWTATYSTAASGTSGSVCTALRGDVVVLI
RSEDLFNLSVPLGRPLLPSLFIQTSLHGWKVKLLESPCFSPSHRPLFSSAHNQWKADSHL
KEATSRLMRNFGLKRLLLADGKEQWHGCGKETERCFGTVRDDTPEYLYLERWTPPCCLRA
LRETTKYVINILESSGVRYWLEGGSLLGAARHQDIIPWDYDVDLGIYLEDVPNCDYLKNL
DSGSLVDANGYVWERAVEGDFYRVQYSEANHLHVDLWPFYPRNGVMTKDTWMEHKQDMEF
PEHFLQPLVPMPFAGVTAYGPNNHRAFLELKFGEGVIENPQYPNPAKKRLDRSRL
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atgcgggtgagtttctgccagggccttctgactggagccatcgctctgaacctgctcatc
ctctactatgtgtcccaagcccagcagcagatgatggagaaacgccgggacccaggaagg
ggctccaggaaggctgccttacctgctaccgggctggagggcggcatggggggcctggta
gtggttggcgcggggatggttggagctggaggtgtcgggggagaggggaacagccacggc
cctcgtgtgactgtcctcctacgggagtttgagaattttgagaactacgtcggtgatgtg
gcacgctccttcctgcaccagagacctgagctgcccttcctggctgtgtctgacaccccg
ccctacccccctctgtctctccccgagggggcccgtctcctggtgctctcccccagcccc
gagcagcctccgcaggcccaccggccagagttccacgttcagacagagtttgtgctgctg
gtgcctgacggggtggagctggagcagggccgagctgtggagaggctgatccgggagctg
gagggggagggcggggggcccgtgaggctggtggcttccccagtgttggcacgctcgacc
gttcagtgcctgcacctgcgggtcagccttagagagtggacggccacctattccacagca
gcgtctgggaccagtggtagcgtgtgtacagcccttcggggggacgtggtggtcctcatc
cgctccgaggacctcttcaacctgtctgtcccactggggaggcccctgctgccctcactc
ttcatccagacctccctgcatggctggaaggtcaagctcctggagagcccctgcttctcc
cccagccaccggcctctcttcagctcagcccacaaccagtggaaggccgacagccatctg
aaggaggccactagccggctgatgaggaactttgggctgaagcgtctgctactggctgat
gggaaggagcagtggcacggctgtgggaaggagacggagcgttgcttcggtacggtccgg
gacgacacccctgagtacctgtacctggagcgctggacacctccctgctgcctgcgcgcc
ctccgcgagaccaccaagtatgtgatcaacatcctggagagctccggggtgcgctactgg
ctggaaggaggctccctgctgggggcggcccgccaccaggacatcatcccctgggactat
gatgtggacctgggcatctacctggaggacgtgcccaactgtgactacctgaagaacctg
gactctggttctctggtggatgctaacggctatgtgtgggagcgggcagtggagggggac
ttctatcgggtgcaatacagcgaggctaaccacctccatgtggacctgtggcccttctac
ccgcggaacggcgtcatgaccaaagacacgtggatggagcacaagcaggatatggagttc
cccgagcacttcctgcagccgctggtgccgatgcctttcgccggcgtcaccgcctacggc
ccgaacaaccaccgcgccttcctggagctcaagtttggggagggggtcatcgagaacccc
cagtaccccaaccctgccaagaagaggctggataggagcaggctgtga
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