Oncorhynchus tshawytscha (Chinook salmon): 112267007
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Entry
112267007 CDS
T05605
Name
(RefSeq) complement C4
KO
K03989
complement component 4
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
otw01002
]
112267007
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
otw04147
]
112267007
Peptidases and inhibitors [BR:
otw01002
]
Peptidase inhibitors
Family I39: alpha2M family
112267007
Exosome [BR:
otw04147
]
Exosomal proteins
Exosomal proteins of hepatic cells
112267007
Exosomal proteins of other cancer cells
112267007
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TED_complement
A2M
A2M_recep
A2M_BRD
NTR
MG3
MG2
MG1
ANATO
CO4A-B_CUB_C
MG4
C3_CUB2
Glyco_hydro_81
Motif
Other DBs
NCBI-GeneID:
112267007
NCBI-ProteinID:
XP_024300764
LinkDB
All DBs
Position
LG14:31075588..31096913
Genome browser
AA seq
1719 aa
AA seq
DB search
MRNTLLLIMSALTAVSGQRPTCLITAPNIVHLGVEETVTVQLQGAIKPTQYTLYFLYQTA
NNKVLSEKKHVTLNEANGYQAVVKMRVIPSLYEEAIKSIRKIKKIVPFIQLATETNDDFL
PKKKTILLSTKKGYVFIQTDKPIYNPGENVNFRVFTLDNYLLPVDESVNVKIFNSKGLLV
YNQVLHSSKLLQRNIMIPDVETAGHWRIVAAFTNHPMSNSSVEFEVKEYVLPMFEVKIAA
LKPYYLLTEDSFQFNVSARYTYGKGVNGIAYVRFGLINQEGKRTHLPGLENKTSIQDGVA
SITLPTEDLRGKAGKQSIPHMEGYNLYIAVTALETASGDLEEAESTSVKIVTSPYIIDMS
KTKEYFTPGGKFSILATTTHPDGSPAPDLRMRASVSVTSVEGTQSVKMEGSGNSKGEAVL
AFEVPKLATSMDIKMFAEGAEEEVIVGDAKMTVSAVQSEGNRYLSVEIEHVTLEPGGTMT
VTLRDITPPGTPRPAYIYYMVLSKGRVVQMNRVQRTELTTFSLPYSLDLVPSFRLVAYYF
TQAPGKTTIVADSVWADAKDICKGQIEILPFKEHKPADLVTVVVRTDQGDKVALAAVDTA
VYILNKDNKLTPQKMFAYMNSYDLACSMGGGRNSQSVLQDAGLAFITNCGDTEGHVRKDY
SCNDKSKRQKRALNHHQAFSDIINRYQEPVEKRCCHDGARFNSLGLSCESRHSKTIHKSA
PCRTAFLKCCRDATMLRRNITKRKNTHSLAKTSDDIGEEEEAIDEVSVHLRSYFPQTWMW
GIVDVGPSGLVRHSVAVPDSITTWEVQAVGISKTKGFCIAEPKPLVVFQDFFVSLRLPYS
VKRNEQLQMKAVVFNYRTDCMEVTVELVWVEGLCSAGGDRGDKQVVTVPGNSAVPVYFTV
VPLVIGNIPIHVDAYTKTARDQVKKDLKVTGEGELVSLQQEYNIDGKAAKSIELEIPPPP
NAVPGLESDTYISVKGGVMGESVENCLNLDGVDQLISLPKGCAEQTMVTMSPAIHAMRYL
DATGQWVDLKAERRDEAQAMIQAGYGRILTFKKTDGSYGAFLSTPSSVWLTAFIAKELSQ
CRDVISVEDSYIQQSISYLVSRQLSSGGFTDPNPLYDRTMQGGVGGFEGEVSLTAFVLIA
MNHAVALYPEGKGLEMRQAMEQAKAYLESKLDSLQRPFSVAITSYALSLTSPGGDSASMA
QTKLRALAHSDNEADTCHWEASDALRLSGETRANQVPQAQAISVETTAYALLQTVAEGDM
TYATCIARWLTEQRQYGGGFRSTQDTVVALEALAKYSIKDNDVQDLDLNVEMCYQNGSKQ
RVHLTKRNALTLSAFQVNQGSQITINTEGKGNGTLSVVQTYRTLESMDLYCGFYSLNVSV
EGEVKYRKKADDGPELDDYYNYESDGVGNPSDEPMSRMEWFDLRTRRKRHTPQEEEREKS
LVYTVCVGLTSGNSTGMVIVDISLLSGLKPNMQDLEENVKGTEKYIDHYDIAPNKVFLYF
AEITEEPQCVAFRAKQISPMGLVQPAAAVVFDYYNPERRCTVFYSSPQKSNMIAKICQDN
MCSCAEGGCPKKKVTYSKDMEKETRRSFACFSPIVNYVYVVKFVNSSDDGVFQHYTTSLT
KILQTGKDVMQTGAVRDMIKRKACDEFDMKTDRNYLIMGRDGTISDTTDHSGKPVYVLDN
EMWLEEIPEERKCKATKNRKACNMLKDFMKQYEVNQCSI
NT seq
5160 nt
NT seq
+upstream
nt +downstream
nt
atgaggaacacactgcttctgatcatgtctgcactgactgcagttagtgggcagaggcca
acatgtctcatcactgctcccaacatagtccacctgggagtagaggagacagtgacagta
cagctccagggagctatcaagcctacacagtacactctgtacttcctgtaccaaactgcc
aataataaagttctgtctgaaaaaaagcatgtaactcttaatgaagccaatggctatcag
gcggttgtgaaaatgagggtaattcctagcctgtacgaagaggcaatcaaaagcataaga
aaaataaagaaaattgtgccatttatccaactggctacagagaccaatgatgattttctt
ccaaaaaaaaaaacaatccttttgtcaacaaaaaagggttatgtcttcattcagacagac
aaaccaatctacaatccaggagagaatgtcaatttcagggtcttcacgttagacaactat
ctgctgcctgttgatgaaagcgtcaatgtcaagatatttaactccaaaggcctgctggtg
tacaaccaggttctacactccagtaaactccttcagaggaacataatgatccctgacgtt
gagacggctggccattggaggattgttgccgcttttaccaaccatcccatgtccaactct
tcagtggagtttgaggtcaaagaatatgttcttcctatgtttgaggtgaagatagcagct
ttgaaaccatattatttgctgacagaggattcctttcaattcaacgtctctgcaaggtac
acctatggcaaaggtgtcaatggcatagcttatgttagatttggactaatcaatcaagaa
ggcaaaagaacacatctacctggcctagaaaacaagacttctatccaagacggcgtcgcc
agcattacgctgccaactgaagacctacgtgggaaagcaggaaagcaaagtatcccacac
atggagggatacaatctgtacatagctgttacagctttagaaacagcaagtggagatcta
gaagaagctgagagcacttcagtaaagatagtgacgtctccatacatcattgacatgtct
aagactaaggaatacttcacacctggaggaaagttctctatcctggccaccaccacccac
ccagatggatccccagcccctgacctccgtatgagggcttcagtttcagtgacctctgta
gaaggcacacaatctgtgaagatggagggatccggtaactctaagggtgaggctgttctc
gccttcgaagtgcccaaactggccacgtctatggatatcaagatgtttgctgagggagcg
gaggaggaggtaatagtgggtgatgccaaaatgacagtgtcagcagtccagtctgagggg
aacagatacctgagtgtagagatagaacatgtcaccctggagcctggaggaaccatgacg
gtcactctcagagacatcacccctccaggcaccccacgaccagcctacatctactatatg
gtcctgagtaagggcagagtggtccagatgaacagggtccagaggactgagctgaccacc
ttcagtctgccctacagtcttgacctggtcccctccttcagactggtggcctactacttc
acacaggcaccagggaagactaccatagtggctgactctgtatgggcggatgccaaagat
atctgcaaaggacagattgagatccttccatttaaagagcataaaccagctgacttggtg
actgtggtggtccgtacagaccagggagacaaggtagctctggctgctgtagatacagct
gtttacatcctcaacaaggacaacaaactcactcctcagaagatgtttgcctacatgaac
tcctatgacctggcgtgttctatgggagggggcaggaactcccagtctgtgttacaggat
gctgggctcgcctttataaccaactgtggagatacagagggtcacgtgagaaaggattac
tcctgtaacgacaaaagtaaaagacagaagagagccctgaaccatcaccaggctttctct
gacatcatcaacaggtaccaggagccagtggagaagaggtgttgtcacgatggggccagg
tttaacagcctgggtctgtcctgtgagagtcgtcattctaaaaccatccacaagtctgct
ccgtgtcgcactgccttcctcaagtgctgcagagatgccaccatgctgaggagaaacatc
acaaagagaaaaaacacacacagcctggctaaaacgtctgatgatattggtgaggaagaa
gaggccatagatgaggtgtctgtccacctccgctcctatttccctcagacctggatgtgg
ggcatcgttgatgtggggccctctggtctcgtaagacacagtgttgctgtccctgactcc
atcactacctgggaggttcaagcagtgggaatctctaaaacaaaagggttttgtatagca
gagcccaagcctctggtggtgtttcaggacttctttgtatctctcagacttccctattct
gtgaagagaaatgaacagctacagatgaaagctgtggtgttcaactacagaacagactgt
atggaggtgacagtggagctggtgtgggtggagggtctgtgcagtgcagggggagacaga
ggggacaagcaggtggtcacagtaccaggtaactctgctgtccctgtctacttcaccgtg
gttcctctggtcataggaaacatccctatccatgtggacgcctacactaagacggcccgc
gaccaggtcaagaaggacctcaaagtcacgggggaaggggaactggtctcattacaacaa
gaatacaacattgacgggaaagctgccaagtcaatcgagcttgaaattccacctcctcct
aatgctgtccctgggctggaatctgacacctacatcagtgtcaaaggtggtgtgatggga
gagtcagtggagaactgtctaaacctggatggagtggaccagctcatctcccttcccaag
gggtgtgcggagcagaccatggtcaccatgtctccagccatccacgccatgagatacctg
gacgctactggacagtgggtcgacctaaaggctgaacgcagagatgaagcccaagccatg
atacaggctggatacggcagaatcctgaccttcaagaagaccgatggatcctatggagct
ttcctgtcaactccaagcagtgtttggttgacagcctttatagccaaggagttgtcccag
tgcagggacgtgatttcagtggaggactcctacatccaacagtctatttcctacctggtg
tctagacagctgtccagtggaggcttcactgaccctaacccactctatgaccgcaccatg
cagggtggagtgggagggtttgagggagaggtgtctctgacggcgtttgttctgatagcc
atgaaccacgctgtggcactgtaccctgaaggaaaaggcttagaaatgaggcaggctatg
gagcaggctaaggcctacctggagtcgaagctggactcccttcagaggcccttctctgtt
gccatcacctcctacgccctctctctaacctcacctggcggagacagtgcctccatggct
cagaccaaactcagggccttggcacacagtgacaatgaagcagatacatgtcactgggag
gccagtgatgctctgaggctgagcggggagacgagggccaatcaggtgccccaggcccag
gccatctccgtggagaccacagcttacgccctgctccagacagtggcggagggagacatg
acgtacgcgacatgcatcgcccgctggctcactgaacagagacagtatggaggagggttc
cgctctacacaggatacagttgtagctcttgaggctctagctaagtacagtatcaaggac
aatgatgttcaggacttggaccttaatgttgagatgtgttaccaaaacggcagcaagcag
agagttcatcttacgaagcgtaatgccctgaccctatctgccttccaggtgaaccaagga
agccagatcactattaacacagagggtaagggaaatgggaccttatcagtggtccagacc
tacagaactctggagagcatggacttgtactgtggtttctacagtctcaatgtctcagtg
gagggagaggttaagtacagaaaaaaagcggacgatggtcctgagctagacgactattat
aactatgagtctgacggggttgggaaccctagtgatgagccaatgagcaggatggaatgg
tttgacctgcgcacacgcaggaagagacacaccccacaggaggaggagagggagaagtcc
ctagtctacactgtgtgtgtgggactgaccagtggtaattctacaggcatggtcatcgtg
gacatctcccttctcagtggactcaaacctaacatgcaggatctggaggagaatgtaaag
ggtactgagaaatacattgaccattatgacatcgccccaaataaagtgttcctctacttc
gctgagatcacagaggaaccacagtgtgtagcgttccgggccaaacagatcagtcccatg
ggcctggtgcagcccgctgctgctgtggtctttgactactacaacccagagaggagatgc
actgtgttctacagctcaccccagaagagcaacatgatcgccaagatctgtcaggacaat
atgtgctcctgtgcagagggtggctgcccaaagaagaaagtcacgtacagtaaagacatg
gagaaagagactcgcaggagctttgcttgtttctctcccattgtaaattatgtgtacgtc
gtcaagtttgtcaactcatccgatgatggagtctttcaacattacaccacatcactgacc
aaaatcctacagacaggtaaagacgtgatgcagactggagcagtgagagacatgatcaaa
cgtaaagcctgtgatgagtttgacatgaagactgacaggaactacctgatcatgggtaga
gatgggaccatctctgacaccactgaccacagtgggaagcctgtctatgtcctggataat
gagatgtggttggaggagattccagaggagaggaagtgtaaagctactaagaaccgtaaa
gcctgtaacatgctcaaggacttcatgaaacagtacgaggtcaaccagtgttcaatataa
DBGET
integrated database retrieval system
