Oncorhynchus tshawytscha (Chinook salmon): 112267746
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Entry
112267746 CDS
T05605
Name
(RefSeq) LOW QUALITY PROTEIN: vitamin D3 receptor B-like
KO
K08539
vitamin D3 receptor
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
otw01009
]
112267746
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112267746
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
otw03310
]
112267746
Protein phosphatases and associated proteins [BR:
otw01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
112267746
Transcription factors [BR:
otw03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
112267746
Nuclear receptors [BR:
otw03310
]
1. Thyroid hormone like
1I. Vitamin D3 like receptor
112267746
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
PCF11_charged
DUF7206
Motif
Other DBs
NCBI-GeneID:
112267746
NCBI-ProteinID:
XP_042156413
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Position
LG02:49902406..49970021
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AA seq
444 aa
AA seq
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MVKKRVAKSLSPICKKGHAKIPVMETTAVSTTTLANDEFDRNVPRICGVCGDKASGFHFN
AMTCEGCKGFFRRSMKRKASFTCPFNGSCTITKDNRRHCQACRLKRCVDIGMMKEFILTD
EEVQRKKDLIQRRKDEEAQREAQRPRLSEEQSQVIATLVEAHHKTYDDSYSDFNRFRPPV
REGPVTRSASRAASLHSLSDASSDSFSHSPESVDTKLMNFSNLLMMYQEQGASRTPXDDG
SKLSMLPHLADLVSYSIQKVIGFAKMIPGFRELTAEDQIALLKSSAIEVIMLRSNQSFNL
EDMSWSCGGSDFKYCVNDVTKAGHTLELLEPLVKFQVGLKKLNLHEEEHVLLMAICLLSP
DRPGVQDHGRIETLQDHLSETLQAYIQLHHPGGRLVYAKMIQKLADLRSLNEEHSKQYRS
LSFQPEHSMQLTPLVLEVFGSEVS
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atggttaagaagagagttgccaagtctttatctcccatctgcaaaaaagggcatgccaaa
atcccagtaatggagactacggctgtgagtaccaccactctggccaatgatgagtttgac
aggaacgtgccgcggatctgcggtgtgtgcggggacaaggcctccggattccacttcaat
gccatgacctgcgagggctgcaagggcttcttcagacgcagtatgaagcgcaaggccagc
ttcacctgtcccttcaacggcagttgcaccataaccaaggacaaccgccgccactgccag
gcctgccggctcaagcgctgcgtggacatcggcatgatgaaggagtttattctgacagac
gaggaggtgcagaggaagaaggacctgattcaacggagaaaggatgaggaggcgcagagg
gaggcgcagcgaccccggctgagcgaggagcagagccaggtcatcgccacgctggtggag
gctcaccacaagacctacgacgactcctactctgacttcaaccgcttcaggcctccggtc
cgagaaggcccagtgacacgcagtgccagcagagctgcctctctccactctctatctgat
gcctcatctgactccttcagccactctccagagtcggtggacactaagctgatgaacttc
agtaacctgctgatgatgtaccaggagcagggggcatcccggactccgnacgacgacggc
tccaagctctccatgctgccccacctggccgacctggtcagctacagcatccaaaaggtc
atcggcttcgccaagatgatccctggcttcagggagctgacggctgaggaccagattgcc
ctgctcaagtcgagtgccatcgaggtgatcatgctgcgctccaaccagtccttcaatctg
gaggacatgtcctggagctgcggagggtccgacttcaagtactgcgtcaacgacgtcact
aaagcgggccacactctggagctgctggagcccctggtcaaattccaggttggcctgaaa
aaactcaacctccacgaggaggaacacgtgctgctcatggccatctgcctactctcccca
gaccgtccgggcgtgcaggaccacgggcgcatcgagaccctgcaggaccatttgtcggag
acgctgcaggcctacattcaactgcaccacccgggcggccgcctcgtatacgccaaaatg
atccagaagctggcggacctgcgtagcctgaacgaggagcactccaagcagtaccgctcg
ctgtccttccagcccgagcacagcatgcagctgaccccgctggtgctggaggtgttcggc
agcgaggtctcctaa
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