Oncorhynchus tshawytscha (Chinook salmon): 121843114
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Entry
121843114 CDS
T05605
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-1-like
KO
K04858
voltage-dependent calcium channel alpha-2/delta-1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04010
MAPK signaling pathway
otw04260
Cardiac muscle contraction
otw04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
121843114
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
121843114
04261 Adrenergic signaling in cardiomyocytes
121843114
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
otw04040
]
121843114
Ion channels [BR:
otw04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
121843114
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VGCC_alpha2
VWA_N
VWA
dCache_1
VWA_2
DUF2201
VWA_CoxE
Motif
Other DBs
NCBI-GeneID:
121843114
NCBI-ProteinID:
XP_042168648
LinkDB
All DBs
Position
Unknown
AA seq
927 aa
AA seq
DB search
MDTYRSFTALLLLLASLNSVSTVQFPSPLLIKEWVEQMQQELVTLTDTASGVQNLIQIFQ
SHRKYFSVGSNDASQLVANAAGNIENLLANRSRALKTLASAAEDFQMWHRWKNDPEPDDI
HYYYAKENLDSNDTEVKKPNRLYPEFKEDEQFRRLISYNTTAVHIPTDIYEGSTIVLNEL
NWTDALEAVFRKNKEEDPTLLWQVFGSATGLARYFPASPWMDSRKTPNKIDLYDVRRRPW
YIQGAASPKDMLILVDASGSVSGLTLKLIHTSVNEMLETLSDDDYVNVVYFNDKAMKAAC
FQNLVQANVRNKRFLKDAVRNISAKGITNYKGGFELAFEQLSSLNVTQGRALCNKIIMLF
TDGGEERAQEIFQKYNADKKVRIFTFSVGQHNYDKGPIQWMACTNKGYYYEIPSIGAIRI
NTQEYLDVLGRPMVKANNKAKQVQWTNVYQDALELGLVITGTLPVFNKTNTKADKERGLQ
RPQNQLILGVMAIDVSLDDIKRLTPRFTFGPNGYYFAIDPNGYVLLHPNLCPKNPKFQEP
VTLDFLDAELEDEIKVEIRTNMIRGETGHRTVHTLVKSQDERYIDRSERSYTYAPVKGTD
YSLALVLPVYSLHYIHTTIGDTITQAKLELGDEVSESLQEDKFEEYGYTLIAPREYCKDL
KPSKNNTEFLMDFNEYIDRKTPNNPLCNVDLVNRLLLDAGITSDLVKQWRDQMPNGVLAR
FVATDGGITRIYPKSAGLDWTEDPETYESSFYKRSLDNDIYIFTPTPYQEDTNMTEDSVL
VSRAVNLDIDGVRLKPAVVGVKLDINTWMTNFINATLKMNCKDEICGCQRNDEHVDCVIL
DDGGFLVMANRDEYIGQIGQFFGMIDPILMVNLVNMSLFTLNKTYDYQSVCDPKRESKGS
AAGLRSVYVPTIADILNVGWLASAAAW
NT seq
2784 nt
NT seq
+upstream
nt +downstream
nt
atggatacctacaggtccttcaccgctctacttttacttctggcttcgttaaatagtgtg
tcaaccgtgcagttcccgtcgccacttctgataaaggaatgggtggagcagatgcagcag
gagctggtcacactgacggacacagccagcggagtgcagaacctcatacagatcttccag
agccacaggaagtacttcagtgtggggtccaacgatgccagccagctggtggctaatgca
gcggggaacattgagaatctcctggccaaccgttctcgtgctctcaagacactggcatcc
gctgcagaggattttcagatgtggcatcggtggaagaatgatcctgagcctgatgacatc
cattactactatgccaaagaaaacctggactcaaatgatacagaggtcaagaagccaaac
cggctttatccagagtttaaggaagacgagcaatttagacgtctcatctcctataacacc
acagcagtccacatacccacggacatatacgagggctccaccattgtgctgaatgagctg
aactggacagacgcattagaggccgtgtttaggaagaacaaggaagaggatcctactcta
ctgtggcaggtgtttggcagcgccaccggattggctcgctacttcccagcatccccttgg
atggactcgcgaaaaacgcccaataagattgacctctacgacgtccggcggcgaccgtgg
tacatccagggggcagcgtctcctaaggacatgctgatcctagtggatgcgagtggcagt
gtctctggtctcaccctcaagctaatccacacctctgtcaacgagatgctggagaccctg
tctgacgatgactacgtcaatgtggtctatttcaatgataaagcgatgaaggcagcgtgc
tttcagaacctggtccaggccaacgtgaggaacaagaggttcctgaaggatgctgtgcgg
aacatctcagccaagggcatcaccaactataaaggcggcttcgagttggccttcgagcag
ctctcatcgttgaacgtgacccagggcagggcgttgtgtaacaagatcatcatgctgttc
actgacggaggagaggagagggcccaggagatcttccagaagtataacgctgacaaaaag
gtgcggatattcacgttctcagtgggccaacacaactatgacaaaggaccaatccagtgg
atggcctgcaccaacaaagggtactattatgaaatcccctccatcggcgctatcaggatc
aacactcaggagtatctggatgtactgggaaggcccatggtcaaagcaaacaacaaggcc
aagcaggttcaatggaccaacgtttaccaggacgcgctggagctgggtctggtgatcaca
ggaacacttccagtcttcaacaagaccaacaccaaagctgacaaagagaggggactacag
aggccccaaaaccagctgatcctgggagtgatggctatcgatgtgtctctggacgacatc
aaaagattaacaccgagatttacatttggaccaaatggttattactttgccattgacccc
aacggttacgtcttgctgcatcccaacctctgcccaaagaatcctaaatttcaggagcct
gtaactctggacttcctggatgctgagctggaggatgagattaaagtagagataagaacg
aacatgattcgtggagaaaccggccaccgcaccgtacacacactagtgaagtcccaggat
gagcggtacatagaccgaagcgaaaggtcgtacacatatgcccctgtaaagggtacagat
tacagtctagccttggtccttccagtgtacagcctgcattacatccacactactatcgga
gacaccatcacccaggccaaattggaattgggggacgaggtctctgaaagcctgcaggaa
gacaagtttgaggagtatggatacactctcattgcaccaagggagtactgtaaggatctg
aagccgtctaaaaacaacacagagttcctgatggacttcaacgagtacatcgacaggaag
actcccaacaacccactgtgcaacgtggatctggtgaacagattgttgctggacgctggc
atcacatcagacctcgttaagcagtggagagatcagatgccaaatggagtcctggccagg
tttgtggccactgatggaggaatcactcgcatttatcccaagagtgctggactagactgg
acagaggacccagagacgtatgagtcaagcttctataagagaagtctggacaatgacatc
tacatcttcacaccaacaccctaccaggaggacaccaacatgactgaggactcagtcctg
gtgagcagagcagtgaacctggacattgatggagtcagactcaaaccagcagttgtggga
gtgaaactggacatcaatacctggatgaccaacttcatcaatgctactctgaagatgaac
tgtaaggacgagatctgtggttgtcagaggaatgatgagcatgtggactgtgtcatcctg
gatgatgggggattcctagtcatggccaatcgggatgaatacatcggtcagatcggccag
ttcttcgggatgatcgaccctatcctcatggtcaacctggtcaacatgtctctgttcacg
ctcaacaagacatacgactaccagtcggtctgcgaccccaagagggagagcaaggggtcc
gcggcgggcctgcgctcagtctacgtgcccaccatagcagacattttgaacgttggatgg
ttagcatcagcagcagcctggtga
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