Oncorhynchus tshawytscha (Chinook salmon): 121844920
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Entry
121844920 CDS
T05605
Name
(RefSeq) exostosin-1a-like
KO
K02366
glucuronyl/N-acetylglucosaminyl transferase EXT1 [EC:
2.4.1.224
2.4.1.225
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw00534
Glycosaminoglycan biosynthesis - heparan sulfate / heparin
otw01100
Metabolic pathways
Module
otw_M00059
Glycosaminoglycan biosynthesis, heparan sulfate backbone
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
121844920
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
otw01003
]
121844920
Enzymes [BR:
otw01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.224 glucuronosyl-N-acetylglucosaminyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase
121844920
2.4.1.225 N-acetylglucosaminyl-proteoglycan 4-beta-glucuronosyltransferase
121844920
Glycosyltransferases [BR:
otw01003
]
Glycan extension
O-Glycan
121844920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_64
Exostosin_GT47
RXYLT1_C
Motif
Other DBs
NCBI-GeneID:
121844920
NCBI-ProteinID:
XP_042171368
LinkDB
All DBs
Position
Unknown
AA seq
742 aa
AA seq
DB search
MQAKKRYLILFSAGACLILLLYFGGMQTALSRSNNRRDDRSLDGHHGSPQWHHFSGSLQP
FSPWDQMETEEYNVHISPRQKRDVISGVYNGKRCRMDSCFDFSLCKTNGFKVYVYPQQKG
EKMSESYQNILSSIEASRFYTSDPGQACLFVLSLDTLDRDILSPQYVHNLRTKVQNLHLW
NNGKNHLIFNLYSGTWPDYTEDLGFDFGQAMLAKASIGTENFRPNFDVSIPLFGKDHRSA
GEERGYLKHNSIPPYRKYMLVFKGKRYLTGIGSDTRNALYHVHNSEDVVLLTTCKHGKDW
QKHKDARCDLDNAEYDKHDYREMLHNSTFCLVPRGRRLGSFRFLEALQAACVPVILSNGW
EMPFSEIIHWNTAAVIGDERLLLQIPSTVRSIHQDNILSLRQQTQFLWEAYFSSVERIVL
TTLEIIHDRVLQHAARSNLMWNSLPGGLYSLPQYSSYLGDFPFHYAKLGIKPRPKFTAII
HAVTPLVSQSQPILKLLVAVAKSQYCVQVIILWNCDKPLPAKHRWPATAVPVLVIDGESK
VMSSRFLPYDTIPTDAVLSLDEDTVLSTTEVDFAFTVWQSFPERIVGYPARSHFWDSNKE
RWGYTSKWTNDYSMVLTGAAIYHRYYHYLYTSYLPASLRGLVDQLSNCEDILMNFLVSAV
TKLPPIKVTQKKQYKETMMVQTSRASRWADPDHFAQRQSCMNKFASWFGSMPLVHSNMRL
DPVLFKDQVSILRKKYKDIERL
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atgcaggccaaaaaacgctacttaattctgttctccgccggtgcgtgtctcattctgttg
ttgtactttggagggatgcaaaccgcgctatccagaagcaacaaccggcgtgatgaccgc
agcctcgatggacaccacgggagtccccagtggcaccacttctcggggtccctccaaccg
ttcagcccctgggaccaaatggagaccgaggagtacaacgttcacatatcgccacgacag
aagagggatgtcatttcgggagtttataacgggaaacgttgccggatggactcctgcttt
gatttttccttgtgcaaaaccaacggatttaaagtttacgtttacccgcaacagaaagga
gagaagatgtccgagagttatcagaatattttatcttccattgaggcttccaggttctat
acgtctgacccgggacaggcttgtctatttgtcctgagtttggacactctagacagggac
attctgtctccgcagtatgtccacaacctcagaactaaagtccagaacttgcatctgtgg
aataacggaaagaatcacctcatcttcaacctctattcgggaacttggcccgactacacg
gaagatctgggcttcgactttggacaggccatgctagccaaggcaagcatcggcacagag
aacttcagacccaatttcgatgtctccatccctctttttgggaaagaccaccgcagcgcc
ggagaggagaggggttatttaaaacacaactctatcccaccgtacaggaaatacatgctt
gtgttcaaagggaaacgatacctcactggaatcggatcagacacgaggaatgcattatat
cacgtccataactccgaggacgtggtgctgctcaccacatgtaaacacgggaaagactgg
cagaagcacaaggatgcccgctgtgacctcgacaacgccgaatatgacaaacatgattac
agagagatgcttcacaactctaccttctgtctggttcccagaggacgacgcctgggatcc
ttccgcttcctggaagcactgcaggctgcctgtgtacctgtgatactcagtaacggctgg
gagatgcccttctcagagatcatccactggaacacagcagctgtgatcggggacgaacga
ctgctacttcagattccgtctacggtgcgttccattcaccaggacaacatcttgtctctc
agacagcagacccagttcctgtgggaggcctacttctcttctgtagagaggatagtactc
acaacactagagatcatccatgaccgggtgctccagcatgcagcccgtagtaacctgatg
tggaacagtcttcccggaggtctctactccctgcctcagtactcctcatacctgggagac
ttccctttccactatgccaagctaggtatcaagcctcgtcccaagttcacggcgatcatc
catgctgtgactcccctggtctcccagtctcagcccatcctcaagctactggtggctgtc
gccaagtcccagtattgtgtccaggtgatcatcctatggaactgtgacaagcccctcccg
gccaaacaccgctggcctgccaccgccgtacctgtcctagtcatagatggggagagcaag
gtgatgagcagtcgtttcctgccctatgacacaataccaacagacgccgttctgagtctg
gacgaggatacagttctctctactactgaggtggactttgctttcacggtgtggcagagt
ttcccagagaggattgtgggatacccggccaggagtcatttctgggacagcaacaaggag
aggtggggttacacctccaagtggaccaacgactactctatggtcctgacaggagctgct
atataccacagatactaccactacctgtataccagttacctgccggctagtctgaggggc
ctggtggaccagctgtcgaactgtgaagacatcctgatgaacttcctggtgtcagccgtc
accaagctgccgcccatcaaggtcacccagaagaaacagtacaaggagactatgatggtg
cagacctctagagcgtctcggtgggccgacccagaccactttgcccagcggcagagctgc
atgaataagtttgccagctggtttggcagcatgcccctggtgcactctaatatgcgtctg
gacccggtgttgtttaaagaccaggtgtccatactgagaaagaaatacaaggacatagag
agactataa
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