Oscillibacter valericigenes: OBV_19480
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Entry
OBV_19480 CDS
T01636
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
ova
Oscillibacter valericigenes
Pathway
ova03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ova00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
OBV_19480 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ova03400
]
OBV_19480 (nth)
Enzymes [BR:
ova01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
OBV_19480 (nth)
DNA repair and recombination proteins [BR:
ova03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
OBV_19480 (nth)
Prokaryotic type
OBV_19480 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
HHH_5
RecR_HhH
HHH_8
Motif
Other DBs
NCBI-ProteinID:
BAK99146
LinkDB
All DBs
Position
complement(1847806..1848459)
Genome browser
AA seq
217 aa
AA seq
DB search
MKAKAAVKRIIETLKGVYPDALCSLQYAKGYELLFAVRLSAQCTDARVNQIAPALFARFP
TLQSFAEADPAEVGRYIHSCGFFNGKSRDLVACARKLLADHGGKVPATMEELTALPGVGR
KTANLILGDVYGQPAYVCDTHCIRITGRLGLTDGSKDPLQVERQLRQVLPPAESSDFCHR
MVLFGRDTCTARSPKCEDCPLQRDCDLRKSEKKAEKK
NT seq
654 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcaaaagcggcggtcaaacgcatcatcgagacgctgaagggcgtctaccccgat
gcgctctgctccctgcaatacgcgaagggctacgagcttctgttcgccgtgcggctctcc
gcccagtgtaccgacgcgcgggtaaaccagatagctcccgctctgtttgcccggttcccc
acccttcagagcttcgcggaggcagacccggcggaggtggggcggtacatacactcctgc
gggtttttcaacgggaagtccagggatctggtggcctgcgcccggaaattgctggcggac
cacggcggaaaagtccccgccaccatggaggagctgacggctctgcccggtgtggggcgc
aagacggcgaacctgattttaggagacgtctacggccagcccgcctatgtctgcgacacc
cactgcatccgcatcacgggccgtttgggcctgacggacggcagcaaggaccctcttcag
gtggaacggcagcttcggcaagttcttccgccagcggagtcctccgatttctgccaccga
atggtgttgtttggccgggacacctgtaccgcccggtctcccaagtgtgaagactgcccg
ctgcaaagggactgtgatctgagaaaatcagaaaagaaggcagagaaaaaatag
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