Oxalobacter vibrioformis: NB640_05725
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Entry
NB640_05725 CDS
T08675
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
ovb
Oxalobacter vibrioformis
Pathway
ovb00300
Lysine biosynthesis
ovb00550
Peptidoglycan biosynthesis
ovb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ovb00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
NB640_05725
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
NB640_05725
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ovb01011
]
NB640_05725
Enzymes [BR:
ovb01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
NB640_05725
Peptidoglycan biosynthesis and degradation proteins [BR:
ovb01011
]
Precursor biosynthesis
Amino acid ligase
NB640_05725
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
YqeC
Motif
Other DBs
NCBI-ProteinID:
WAW11128
UniProt:
A0A9E9P4I4
LinkDB
All DBs
Position
complement(1155212..1156741)
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AA seq
509 aa
AA seq
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MTNRSQIRAVSEWLGKTCPNGDLFSDSREIVSAGKDAVFFAYQGDATDGRSYIAHAIENG
AKAIVYEEAGFDWKTEWHIPHLAVKGLKALAGPVADAYYGNPSASMYVVAVTGTNGKTSC
TQWLGSALSRLGEKTAVIGTLGIVVFENGNAGKAEITGYTTPDQVQLQRKLAMLREEGVA
CVAIEASSIGIEECRLNGLVIDTVLYTNFTRDHLDYHKNMAAYEAAKRKLFDWPGLKHAV
MNLDDAKGREWASAINGKLSVSGYTIQDEKMEGIPVLRATEIQARQNGTVFLADAREGHS
RIQTRLVGNFNVSNVLGVLGVLLTHGVQWKPAVSAVSALEPPPGRMQPLGGQNAPLVVID
YAHTPDALEKGLQALRSVATDRKGALWCVFGCGGDRDRGKRKDMGRVSEMADHIIVTSDN
PRSEVPQQIIDDIVSGMTRPALTIEDRASAILQAVKQASAHDVIFLAGKGHETYQEVKGA
KHPFVDADHASLALATYEVMKKERHENES
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaccgttcacagattcgcgctgtatcggaatggcttggcaaaacctgtccgaat
ggtgatcttttttccgactcgcgggagattgtatcggccggaaaagatgcggttttcttt
gcctatcagggagatgccactgacggaagaagctatattgcccacgcgattgaaaatggt
gccaaagccattgtttatgaagaagcggggtttgactggaaaacggaatggcacattccg
cacctggcagtaaaaggactgaaagcgctggcaggtcctgtcgccgatgcctactatggc
aacccttctgcctctatgtatgtggtagccgttaccggcacaaacggtaaaacttcctgc
acccaatggctgggaagcgcgctttcccgtctgggagaaaagacggcagtcattggcacg
ctggggatcgtggtttttgaaaacgggaatgccggcaaggcggaaattaccggttacacc
acgccggatcaggtgcagttgcaaaggaaactggcgatgttgcgcgaggagggggtcgcc
tgtgttgccattgaggcatcttcgattggtatcgaggagtgccgcttgaatggtcttgtt
atcgatacggtgctttataccaatttcacccgtgatcatctggattatcacaagaatatg
gcggcgtatgaagcggctaagcgaaaactctttgactggccagggttaaagcatgcggta
atgaatctggatgacgccaaaggccgggaatgggcatcagccatcaacgggaagttgtcg
gtatcgggttacacgattcaggatgaaaaaatggaaggtattcccgtattgcgcgctacc
gaaatccaggcacggcagaatggaaccgtatttctggccgatgcccgggaagggcattcc
cggatccagacccgtcttgtcggcaatttcaatgtcagcaatgtgctgggggttctgggc
gtgttgttgacacatggagtccaatggaagcctgcggtttcagccgtttcagcacttgaa
ccgcctcccggccgcatgcagccgcttggggggcagaatgcgccgctcgttgtgatcgat
tatgcccatacacctgatgcgctcgaaaaggggctccaagcgcttcgttcggttgccacg
gacagaaaaggcgcgctctggtgtgtattcggctgcggtggcgatcgtgaccggggcaag
cgcaaggatatggggcgggtatccgagatggcggatcacatcattgtgaccagtgacaat
ccgcgaagcgaagtgccccagcagattattgacgatattgtgtcaggtatgacacgcccg
gcgctgacaatagaagaccgggcgtcggctattctccaggcggtcaaacaggcatctgcc
catgatgtgatttttcttgccggtaagggacacgagacttatcaggaggtaaagggggca
aaacacccgtttgttgatgcagatcacgcatcgctggcgctggccacgtatgaggtcatg
aaaaaggaacggcatgaaaacgagtcttga
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