Opisthorchis viverrini (Southeast Asian liver fluke): T265_02041
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Entry
T265_02041 CDS
T04902
Name
(RefSeq) hypothetical protein
KO
K10605
breast cancer type 1 susceptibility protein [EC:
2.3.2.27
]
Organism
ovi
Opisthorchis viverrini (Southeast Asian liver fluke)
Pathway
ovi03440
Homologous recombination
ovi03460
Fanconi anemia pathway
ovi04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ovi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
T265_02041
09124 Replication and repair
03440 Homologous recombination
T265_02041
03460 Fanconi anemia pathway
T265_02041
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ovi01009
]
T265_02041
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ovi04121
]
T265_02041
03036 Chromosome and associated proteins [BR:
ovi03036
]
T265_02041
03400 DNA repair and recombination proteins [BR:
ovi03400
]
T265_02041
Enzymes [BR:
ovi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
T265_02041
Protein phosphatases and associated proteins [BR:
ovi01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
T265_02041
Ubiquitin system [BR:
ovi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
T265_02041
Multi subunit type E3
BRCC complex
T265_02041
Chromosome and associated proteins [BR:
ovi03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
T265_02041
DNA repair and recombination proteins [BR:
ovi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
T265_02041
BRCA1-A complex
T265_02041
BRCA1-B complex
T265_02041
BRCA1-C complex
T265_02041
BRCA complex
T265_02041
FA (Fanconi anemia) pathway
Downstream FA components
T265_02041
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C3HC4
zf-C3HC4_2
zf-RING_UBOX
BRCT
zf-C3HC4_3
zf-RING_2
zf-C3HC4_4
zf-RING_5
Prok-RING_4
RTT107_BRCT_5
zf-Nse
RING_XB3-XBAT31
zf-RING_6
CCDC24
zf-rbx1
DUF2225
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
20316229
NCBI-ProteinID:
XP_009164453
UniProt:
A0A075A0P3
LinkDB
All DBs
Position
Unknown
AA seq
1310 aa
AA seq
DB search
MDRPSDVEFCLGVIKRFLVCPICLDNFKNPLITPCAHMFCTFCIHEHIGRKRQAKCPLCN
REFTRRSLKVSGKVGRIASACEAILTAYEVESGNPGTAARTRHTRVQQEQPSQSPELDDA
LATQPMVHPNIDCQTTRPNISPSDEHHEAGSDLGDLFSFTQATQPMCTSADESTSVGDML
SHVFQTSRKGTKSRSPTQTREKQLQSTTGDEIVKRSRNKVIRTVPFLPPLPPSVSSSAAL
SLRKPGSRRNLLALSASNIVTSDKHGPPPECSSGHAYLRKTHEVLCRVQPTVVDRMPYQE
DRNPESLIESTECGDKHSGLSEKLKRQPSASCSVRSWPLKRQRLTLSVEIRNRLLQKYGV
TRRSVIEGAISSTLQQTTKSPGWSRWRSMRKELQRRSSSTRLSFRSKSCASLQPKEPSRS
QGVLLPKNARPNQSEDCTPSVRQSLSRHDKLRLTKRDSQSRSSISSTAEKLKPCKFVIPL
RRIFSSKRSRVSLPLCTVPVVQVGDAGPRKVTDHSDSKTKTYTTNLPSSSNLDDHELSVA
GDSLSFLDDVDHTHVHCSACGETLLLRPDSFSAFNSPGSRNTTNQGRTPSPAPRLSCSIS
STYWQAEDPSDTMFDQAHGYTGDKNPFQELEPTAPAHAQKAVCDTACQTDLPQSSDRSPV
CGPFSRTGVETHRSSQIPVVPAPTSLQSPLAVTTAAHLRSPVSISPTSSALVKDTGTSES
PCTLTSVTSTFPASSSEVMPTIDRERLRTECNELEAIVAALQRQLEEQVGGLSPDTTAEL
LRAAGTEPTDADDDDRELPEARVLIATKCPVTNDSFETKAGEGSGSPTVTIPSPGLLKSN
EEFDYRTMHRLQSEFFPSVVYDRELPEARVLIATKCPVTNDSFETKAGEGSGSPTVTIPS
PGLPKPTEEFDHRAMHRLQSEFFPSVIPGTYSSEAVDIIPSSQAEEDLDQQAVMEPVSEQ
NMIRALPSSFQSSLPVSRVEASQPPSSYATSAMCEFTPLVSTSSQSLVGRLANSAYLSEC
PETNLESQANTVNPLVATESTRQRQQGPSKTPPSALVITGSSLSGPDMALLHLFCRRFEV
SEGAQFVPGKTTHVVMRSEADRPRVVKRTLKYFMAILNRAWIVNTDWIRQCLAANRILDE
TPFEIEGDTVCGDCHEGPRRGRLNVPAQPQPLDLDGSNNGPFAGLWLCAYESLGLLSLAD
FKRLATDGGATRVFDKPIDLAAAVNQYVNAQLARPSRPRAIILTSHDAQGFTLSKCQEVY
RIHGFPIISVDWMLNCISLFRRIPISQTYRICPAPGEQPAVPLSTRNRPQ
NT seq
3933 nt
NT seq
+upstream
nt +downstream
nt
atggaccgaccttcagacgtagaattctgccttggcgtaattaagcgttttttagtgtgt
cctatatgtctggataatttcaaaaatccactcatcaccccatgtgcccacatgttctgc
acgttctgcattcatgagcacatagggcgcaagcgacaggccaagtgccctctctgcaac
cgcgaattcacccgccgttcccttaaagtttctggaaaagtgggccgtattgctagtgca
tgtgaagctattctaaccgcttatgaagttgaatccggtaatccaggaacggctgcacgg
accagacatactcgtgttcaacaggagcagccgtcgcaatcacctgaacttgatgatgcg
cttgctacacaaccaatggtacatcctaatatagactgccaaactacccggcctaatatc
tccccttcggacgagcaccatgaggctgggagtgatttgggtgatttgttttcattcacc
caagccactcaaccaatgtgtaccagcgctgatgaatccacatctgttggggacatgttg
agccatgttttccaaacatctaggaagggtactaagtcgaggtctccaactcaaacaagg
gagaaacaactgcaatccacaacaggagatgaaatagtaaagcgttcgcgtaacaaagtt
attcgaacagttccatttttgcctcctttgccaccatctgtttccagcagcgcagcttta
tccttgcgaaagccgggcagcagaaggaatttactcgccttgtctgcttccaatatcgtc
acgtccgacaaacatgggccgcccccagaatgctcttcgggtcatgcgtatttacggaaa
acacatgaagtactctgtcgtgtgcaacctactgttgtcgatagaatgccttatcaagaa
gatcgtaatcctgaatcattaatcgagtccactgaatgtggagataaacattctggtctt
tcagaaaagctgaagcgccagccaagcgcctcgtgttcggtgcggtcctggcccttaaaa
cggcaaagacttacgttgtctgtggagatccgcaatcgtttacttcagaagtatggagtg
accagacggtctgtaattgagggcgctatttcatctacactgcaacaaaccacaaaaagt
cccgggtggtcacgttggcgttcaatgcgcaaagaactgcaacgccgtagctcttccact
cgtctttcttttcgctcgaaatcctgtgcatctcttcagccaaaggaaccttcccgtagc
caaggcgtattgctaccgaaaaatgctagacctaatcagtctgaggactgtacaccttcc
gttcgccaatctctttctcgtcatgataagctaaggcttacaaagagagattctcagtca
agatcatcaatctcttccacagctgagaaactcaagccatgcaaattcgtgattcctctc
cgtaggatattttcgtcaaaacgatctcgtgtgtctctgccactctgcactgtaccagtt
gttcaagtaggagatgcgggacccagaaaagtcaccgatcattcagattcgaagacgaaa
acctacacaactaacctcccttcatcaagcaaccttgacgatcatgagctatctgtggct
ggcgacagtctgagctttctggacgatgttgatcatacacacgtacattgcagtgcatgt
ggtgagacactacttctgcgtcccgacagttttagtgcgtttaattcaccggggtcacga
aatactacaaaccaaggtcggacgccctccccagctcctcgcttgtcgtgctccatctcg
tctacctactggcaagcagaagatccaagcgacacaatgtttgaccaggcccatggttat
actggtgataaaaacccgtttcaagaacttgaacctaccgctccggcgcatgctcaaaaa
gcagtttgcgatacagcttgccagactgatttaccacaatcatcggacaggtcgcctgta
tgcggacctttttcaagaacaggtgttgaaacacatcgttcatctcaaattccggtggtt
cctgcaccaacctcccttcagtctcctcttgcagtaacgactgcagctcacctcagatct
cctgtctctatctcacccacctcttcggctttggtcaaagacacaggaacttcggaatct
ccatgcacgttaaccagtgtgacctccacattccctgcaagttctagcgaagtaatgccc
accatagaccgagaacggttaagaacagagtgtaatgaattggaggctatcgtggccgcc
ttgcagcggcagctggaagaacaagttggcgggcttagcccagacacgacggcagaacta
ctgagagccgcaggtactgaaccgacggacgcagatgatgatgaccgggagttaccagaa
gcccgtgtcttaatcgcaacgaaatgccccgtcaccaacgactcttttgagacgaaggct
ggtgaaggcagtggttcaccaacggtaacaataccgagcccaggtctcctcaaatcaaat
gaagaatttgactaccgtaccatgcaccgtttgcagtcagaattcttcccatctgtggta
tatgaccgggagttaccagaagcccgtgtcttaatcgcaacgaaatgccccgtcaccaac
gactcttttgagacgaaggctggtgaaggcagtggttcaccaacggtaacaataccgagc
ccaggtctccccaaaccaactgaagaatttgaccaccgtgccatgcaccgtttgcagtca
gaattcttcccatctgtgattccgggaacttactcttcagaagcggttgatataatcccc
tcgtctcaagccgaagaagacttggaccagcaagctgtgatggagccagtttcagaacaa
aacatgatcagggctttaccttccagttttcagtcttccctgcccgtctctcgggtggaa
gccagccagccgccaagttcttacgcgacttccgccatgtgcgaattcaccccactcgta
tccacctcgtctcaaagtttggtaggtagactggcgaattccgcttatctgagcgaatgc
ccagaaaccaacttggagtcgcaagcgaacaccgtgaatccattggttgcgaccgagtct
actaggcagcgacaacaagggccaagcaaaactccaccctccgctttggtgataaccggt
tccagcctgtctggacctgatatggcccttttacacttgttctgccggcggtttgaagtg
tctgaaggtgcacaatttgttcctggaaagacaactcacgttgtcatgaggtcagaggca
gatcgaccacgtgttgtcaaacgcactttaaaatactttatggctatccttaatcgagcg
tggattgtcaacacggactggatacgacagtgcttagccgccaacagaatactggatgag
acaccatttgaaatcgaaggagatacggtctgtggtgactgtcatgaaggtcctcgtcga
ggacgtttgaatgttccggcccagccacaaccacttgatttggatggttctaacaatggg
ccattcgccggactgtggctatgtgcctacgagagccttggtcttctgtcgttggcagat
ttcaaaagattggcaacggatggcggggcaacccgtgtatttgacaaaccgattgaccta
gccgcggccgtgaatcagtatgtaaacgcccagttagcccgtccatctaggccccgggct
attatcctaactagccatgatgctcaaggattcaccctttcaaaatgccaagaggtctac
cgcatccatggattccccataatcagtgttgattggatgctgaattgcatctcattgttc
cgacgtatcccaatcagtcaaacctatcgaatctgtccggcaccaggcgaacagccagca
gttccactgagtaccaggaatcgtccccagtaa
DBGET
integrated database retrieval system
