Opisthorchis viverrini (Southeast Asian liver fluke): T265_02621
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Entry
T265_02621 CDS
T04902
Name
(RefSeq) hypothetical protein
KO
K13141
integrator complex subunit 4
Organism
ovi
Opisthorchis viverrini (Southeast Asian liver fluke)
Brite
KEGG Orthology (KO) [BR:
ovi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ovi03041
]
T265_02621
Spliceosome [BR:
ovi03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
T265_02621
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cnd1
HEAT_2
HEAT
PDS5
HEAT_EZ
DUF5691
Motif
Other DBs
NCBI-GeneID:
20316809
NCBI-ProteinID:
XP_009165183
UniProt:
A0A074ZYJ0
LinkDB
All DBs
Position
Unknown
AA seq
1010 aa
AA seq
DB search
MLRNKVNCLSDSSSEIHMHDVVDNLLAKLEALCRECRSTRTDNALSVLCEGLRSLSAHVR
AKCMDVFAALGRPKLWLLANQIGDLVLWHTDDSDARVRERAFDCLRIWSVYAPEEITEPK
LVGSSSRPEQSQCQNSTAQERLGWMKTNLDSVYASACRGLLDAETVVRRTSLLLVARLST
LWPHYELTDPLAMGLPFPSGSSDRVALGQSSCGPILMADDAFARICVRLQDPARQVRQLA
VQLLSELANSVASSCLIQTLEKMVMTDRRVRRAKSDETPMTAKVGKRGASEPATGSGSIM
STGPSGAIISGLEDDYFEVRCATLATVTHLASLNTEFASGCQDLLVDMLTDDIQEVRLAA
VCALGAVGDQVPLQSEQVAIITSALAESSGRIRRRLHQLLARCRLSSAPCLVSLLDGLLH
NLRRYPQDRDSLWRCAASVGRRHPAFVETCLSSLLRTHSWLSGPEPNWEDPAYLTVLLLV
LNAEPGAPGIPAKFPRHISATKVYLRELVPGLLPKRTAPSSDGPDDRVVPMKRLRSDSDG
SCAGLESLCRFLLDLISRIVRVLTDIQSNLPNTTTDEGEATETPGKNEIRLTQKRYIFLQ
RRLSLLTRLVFTDLCRTVRCLDRTGQLNGLVEWMVLLSTAGWCLISSLLDPSPSSSVTSS
DVVNESSERISALEVCPGLSAPQRRRISSLLKRTFNMVLKAEYLFIGKTKEEQNLVCQLS
ETVLSLIRKISMGGPPDYQLVTRGLSVLIPLFSGLIAADKTDSSVRSHSLLLPSMNRLFP
VYVSLLQPSSMDIASDTARLHGPHHTLPAFLSAKLNDEADEGSIWTVPTHNSQSVSSNII
PEIRFTATIATASVRIRAIIIGLSLESAREHICVLFRRPDVAHVQHREPVNRHTTASGLH
EWWPPVSSWHLLDEGLPLSYDELHPHTEVVERVELRAHMELTAGRWSDAGTVEIGLGYYL
ERSVASGQPTEDQVVSSVPVQAKHRIILPLTPISLFAKVRFVPSAPIPQW
NT seq
3033 nt
NT seq
+upstream
nt +downstream
nt
atgctccgcaacaaagtcaattgtttgtcggattcttcaagtgagatacacatgcacgat
gtggttgataatctcctggcgaagttggaggctttgtgcagggaatgtcgttcaacccga
acggataacgccctatccgtcctgtgtgagggtttacgttctttgtcggcgcatgtgcgg
gcaaaatgtatggatgtgtttgccgcattgggccgtcccaagctttggctacttgccaac
caaattggggatctggttttgtggcataccgacgacagtgatgctcgtgtgcgtgaacgt
gcattcgactgccttcgaatatggtcagtttacgcgcctgaggaaatcaccgaaccaaaa
ctcgttggctcttcttctcggccggaacagtcgcaatgtcagaattcgacagcccaagaa
aggctcggttggatgaagacgaacttagattctgtctatgcatcagcctgtcggggtcta
cttgatgcagagactgtggtgcgccgtaccagcttgctcttagtcgctaggctgagcaca
ctttggcctcactacgagctaaccgaccctctggccatgggtttgccattcccttctggc
tcttctgatcgtgtggctctcggtcagtcctcttgcggacctattctcatggcggacgat
gcatttgcaaggatatgtgtacgccttcaagatcccgcaagacaagtcaggcagttggca
gtacaacttttgtccgaactggccaattcagttgcttccagttgtctcattcaaaccctg
gaaaaaatggtcatgactgatcgccgggtacgtcgtgccaaatccgacgagactcccatg
actgcgaaggtgggcaaacgtggagcgagcgaaccggctactggttcgggtagcatcatg
tccactggaccaagtggagcaattatcagtggactggaggatgattatttcgaggttcgc
tgtgcaaccttggccaccgtcacacatcttgcctcactaaacaccgaatttgcctccggt
tgtcaagatcttttggtggacatgttaactgatgacattcaagaggtgcgcttggccgct
gtttgcgctttaggagctgtgggtgaccaggttcccctacaaagtgagcaagttgctatt
atcacatcagcattagcagaaagctctggtcgtatacggcgtcgcttgcaccagctcttg
gctcgatgtcgtctctcttcagcaccttgtttggtcagtcttctggatggtttgttacac
aatctgaggcggtatcctcaggaccgagatagcctctggcgttgtgcagcctctgtcggc
cgacgtcatcccgcatttgttgaaacttgtctgtccagcttgcttcgaactcattcttgg
ttgagtggtcccgaacccaattgggaagacccagcttacctaactgtcctgttgctcgta
ttgaacgccgaaccaggggctccaggaatacccgcaaagtttccgcgccacatatcggcc
acaaaagtttatttgcgtgagttggttccaggtcttcttcctaagcggactgctccttcg
agcgatggcccagatgaccgtgtagtgcctatgaagcgtcttcgctcagacagcgatggc
tcttgtgccggtttagagagcctttgtcgatttctccttgatctgatttctcggatagtc
agagtgttgaccgacatccaaagtaacctgccaaacacaacgactgatgagggcgaagcc
acagaaactccggggaagaatgaaattagactaactcagaaaagatatatcttcctacaa
aggcgcctctcgttgctgacgcgcttggtgtttacggacttgtgccgtacggtacgctgc
cttgatcgaacagggcagctgaacggccttgttgagtggatggttcttctgtccacagct
ggatggtgcttgatatcttcacttttggatccatcgccgtcttcttcagttaccagttct
gatgtggtcaatgaatcctcagaacgcatttctgcactggaagtctgtccgggcttgtct
gctccccagaggcgccggatatctagtctgttgaagagaaccttcaacatggtgctcaag
gcggaatatctctttatcgggaagacaaaagaagaacagaatttggtctgtcaactctcc
gaaactgttctttcccttatccggaaaatttcaatgggtggtccgcctgactatcagtta
gtcactcgtggtctttctgtactaatcccattattctccggtctgatcgctgcagataaa
acggattcttcggtacgttcccactctctgctcttgccctcgatgaatcgtctgttcccg
gtatatgtttccctccttcaaccctcctccatggacatcgcctcggatacggccagatta
cacggaccgcatcatacattaccagcgtttctttctgccaaactcaacgatgaagcagat
gaaggcagcatttggacagtccccacacacaatagccaatctgtttccagcaatattatt
ccagagatacggttcactgccacgatagccaccgcgtctgtccgaatacgtgccattatc
attgggctgagtttggagtcggccagagagcacatctgtgtattgttccggcgtccagat
gtggcgcatgttcagcaccgtgaaccggtcaaccgccacaccactgcctcaggacttcat
gaatggtggcccccagtttcttcttggcacttactagacgaaggactgcctttgagttac
gacgaattacatcctcacaccgaggtagtggagcgcgtcgagttgcgcgctcacatggaa
ctaactgcgggacgttggtctgatgctggcacggtcgaaataggtttgggttattatctg
gagagatcagttgcatccggtcaaccgacagaggatcaagttgtttcatctgttccagtt
caagctaaacatcgtatcattttgccccttaccccaatatcgttgttcgcaaaggtgcgc
tttgttccttctgctccgattccgcaatggtaa
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