Odocoileus virginianus (white-tailed deer): 110121590
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Entry
110121590 CDS
T10722
Symbol
TRPC6
Name
(RefSeq) short transient receptor potential channel 6 isoform X1
KO
K04969
transient receptor potential cation channel subfamily C member 6
Organism
ovr Odocoileus virginianus (white-tailed deer)
Pathway
ovr04022
cGMP-PKG signaling pathway
ovr04360
Axon guidance
ovr04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
ovr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04022 cGMP-PKG signaling pathway
110121590 (TRPC6)
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
110121590 (TRPC6)
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
110121590 (TRPC6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ovr04040
]
110121590 (TRPC6)
Ion channels [BR:
ovr04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
110121590 (TRPC6)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ion_trans
PKD_channel
Ank_2
Ank
Ank_4
Ank_5
ING
Motif
Other DBs
NCBI-GeneID:
110121590
NCBI-ProteinID:
XP_070329767
UniProt:
A0ABM4IPN2
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All DBs
Position
10:complement(67131660..67271209)
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AA seq
933 aa
AA seq
DB search
MNQSPAAFGPRRGGSPAVAARAGARRNESQDYLLMDSELGDDAQPPLPAYGYYPCLRGTD
NRLTHRRQTVLREKGRRLANRGPAYMFNDHSTSLSIEEERFLDAAEYGNIPVVRKMLEEC
LSLNVNCVDYMGQNALQLAVANEHLEITELLLKKENLSRVGDALLLAISKGYVRIVEAIL
SHPAFAEGKRLATSPSQSELQQDDFYAYDEDGTRFSHDVTPIILAAHCQEYEIVHTLLRK
GARIERPHDYFCKCSECNQKQKHDSFSHSRSRINAYKGLASPAYLSLSSEDPVMTALELS
NELAVLANIEKEFKNDYKKLSMQCKDFVVGLLDLCRNTEEVEAILNGDVEIRHSGGDHGR
PNLSRLKLAIKYDVKKFVAHPNCQQQLLSIWYENLSGLRQQTVAVKFLVVLAVAAGLPFL
ALLYWFAPCSKMGKIMRGPFMKFVAHAASFTIFLGLLVMNAADRFEGTKILPNETSTDHA
KQLFRMKTSCFSWMEMLIISWVIGMIWAECKEIWTQGPKEYLFELWNMLDFGMLAIFAAS
FIARFMAFWHASKAQSIIDANDTLKDLTKVTLGDNVKYYNLARIKWDPSDPQIISEGLYA
IAVVLSFSRIAYILPANESFGPLQISLGRTVKDIFKFMVIFIMVFVAFMIGMFNLYSYYI
GAKQNEAFTTVEESFKTLFWAIFGLSEVKSVVINYNHKFIENIGYVLYGVYNVTMVIVLL
NMLIAMINSSFQEIEDDADVEWKFARAKLWFSYFEEGRTLPVPFNLVPSPKSLFYLLLRL
KKWISELFQGHKKGFQEQEDAEMNKRNEGRKFGILGSHEDLSKLSLDRKQFAHSKQSSIR
SSEDFQLNSFTNPPRQYQKIMKRLIKRYVLQAQIDKESDEVNEGELKEIKQDISSLRYEL
LEEKTQNSEDLAELIRKLGEKLSMEPNQEESNR
NT seq
2802 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaaagcccagctgcgttcgggccccggaggggcggctctcccgccgtggcggcc
cgggctggcgcgcggcgcaacgagagccaagactacctgctcatggactcggagctggga
gacgacgcgcaacccccgctgcctgcctacggctactacccctgcctccggggcaccgac
aacagactgacccaccggcggcagacagttctccgtgagaagggaagacggttagctaac
cgaggaccagcgtacatgtttaatgaccactcaacaagcctgtctattgaggaggaacgc
tttttagatgcagctgagtatggcaatatcccagtggtaaggaagatgttggaagaatgc
ctctcactcaacgtcaactgtgtggattacatgggccagaatgccctgcagctagcagtg
gctaatgagcatctggaaattacagaacttcttctcaagaaagaaaatctctctcgtgtt
ggggatgccttgcttttagctattagtaaaggttatgttcggattgtggaagccattctc
agtcacccagcttttgctgaaggcaagcggttagcaaccagcccgagtcagtctgaactc
caacaagatgatttttatgcatatgatgaagacgggacacggttctcccatgatgtgacc
ccaatcattctggccgcccactgccaggaatatgaaattgtgcacaccctcttgcggaag
ggtgctcggatcgaacggcctcatgactatttctgcaagtgcagtgaatgcaaccagaaa
cagaagcatgactccttcagccactccagatctagaattaatgcctacaaaggcctggcg
agcccagcttacctgtcattgtctagcgaagatccagtcatgacagctttagagcttagc
aatgagctggcagtgctggccaacatagagaaggagttcaagaatgactacaaaaaactg
tcgatgcagtgcaaagatttcgttgttggactccttgatctgtgcagaaatactgaagaa
gtggaagccattctgaatggggacgttgaaatacgccacagtggtggagatcatggtcgt
cctaacctcagccgtttaaaacttgccattaagtatgatgtaaaaaaatttgtagcccac
ccgaactgccaacagcagctcctgtccatttggtacgagaacctgtccggcctgcggcag
cagacagtggcggtcaagttcctggtggtgctcgccgtggccgcgggcctgcccttcctg
gccctgctctactggttcgccccctgcagcaagatggggaagataatgcgtggaccgttc
atgaagttcgtagcacacgcagcctccttcaccattttcctgggactgctagtcatgaat
gcagctgacagattcgaaggcaccaaaatccttcctaatgaaaccagcacagatcatgca
aaacagctgttcaggatgaaaacatcctgcttctcatggatggagatgctcattatttcc
tgggtaataggcatgatatgggctgaatgtaaagaaatttggactcaaggccccaaggag
tacttgtttgagctgtggaatatgcttgactttggaatgctggcaatctttgcagcatca
ttcattgcaagattcatggcgttctggcatgcttccaaagcccagagcatcattgatgca
aatgatactttaaaggatttgacaaaagtcacactgggagataatgtgaaatactacaat
ttggccaggataaagtgggacccctctgatcctcaaattatatctgaaggtctttatgca
attgctgtagttttaagtttctccagaatagcctacattttaccagcaaatgaaagcttt
ggacctctgcagatatcacttggaagaacagtaaaagatatcttcaagttcatggtcata
ttcatcatggtgtttgtggcctttatgattggaatgttcaacctctattcctactacatt
ggtgcaaagcaaaacgaagccttcacaacagtggaagagagttttaagacgctgttttgg
gctatatttggactttctgaagtgaaatccgtggtcatcaactataaccacaaattcatt
gaaaacatcggttatgttctttatggagtctataatgttacgatggtcattgttttgcta
aatatgttaattgcaatgatcaacagttcattccaggaaattgaggatgatgctgatgtg
gaatggaaatttgcaagggccaaactttggttttcttactttgaggagggaagaactctt
cctgttcccttcaacctggtgccaagtccaaagtccctgttttatcttttattgaggctt
aaaaaatggatttctgaattgttccagggccataaaaaaggtttccaggagcaggaggat
gcagaaatgaacaagagaaatgaaggaaggaaatttggaattttgggaagtcatgaagat
ctttcaaaattatcacttgatagaaaacagtttgcacatagtaaacaatcaagtataagg
agctcagaagatttccagttaaacagtttcactaatcctccaagacaatatcagaaaata
atgaagaggctcattaaaagatatgtattacaagcccagatagacaaggagagtgacgaa
gtgaacgaaggggaactgaaagaaattaaacaagacatctcaagcctccgctatgaactt
cttgaagaaaaaactcagaattcagaagacctggcagaacttattagaaaacttggggag
aaattatcaatggagccaaatcaagaggaaagcaatagataa
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