Odocoileus virginianus (white-tailed deer): 110123328
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Entry
110123328 CDS
T10722
Symbol
ARHGEF1
Name
(RefSeq) rho guanine nucleotide exchange factor 1 isoform X1
KO
K12330
Rho guanine nucleotide exchange factor 1
Organism
ovr Odocoileus virginianus (white-tailed deer)
Pathway
ovr04270
Vascular smooth muscle contraction
ovr04611
Platelet activation
ovr04810
Regulation of actin cytoskeleton
ovr04928
Parathyroid hormone synthesis, secretion and action
ovr05135
Yersinia infection
ovr05163
Human cytomegalovirus infection
ovr05200
Pathways in cancer
ovr05205
Proteoglycans in cancer
ovr05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
ovr00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
110123328 (ARHGEF1)
09150 Organismal Systems
09151 Immune system
04611 Platelet activation
110123328 (ARHGEF1)
09152 Endocrine system
04928 Parathyroid hormone synthesis, secretion and action
110123328 (ARHGEF1)
09153 Circulatory system
04270 Vascular smooth muscle contraction
110123328 (ARHGEF1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
110123328 (ARHGEF1)
05205 Proteoglycans in cancer
110123328 (ARHGEF1)
09172 Infectious disease: viral
05163 Human cytomegalovirus infection
110123328 (ARHGEF1)
09171 Infectious disease: bacterial
05135 Yersinia infection
110123328 (ARHGEF1)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
110123328 (ARHGEF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ovr04131
]
110123328 (ARHGEF1)
Membrane trafficking [BR:
ovr04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
110123328 (ARHGEF1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RGS-like
PH_16
RhoGEF
HA
PH_13
Motif
Other DBs
NCBI-GeneID:
110123328
NCBI-ProteinID:
XP_070306871
UniProt:
A0ABM4GU74
LinkDB
All DBs
Position
20:10433152..10452996
Genome browser
AA seq
969 aa
AA seq
DB search
MEAEDGARGAPPGPPRPGLVPVSIIGAEDEDFEIELKTNPEEQNNQFQNLDQVKRRPAHL
MALLQHVAMQFEPGPLLCCLHADMLGSLGPKEFKKAFIDFYHSFLDKHSILRVMVPPSVA
FELDRTRPDLFPEDLQRQFVQEVVQSQQVAVVRQLEDFRSKKLMGMTPWEQELAQLGAWV
ARDRASYEARERHLAERQLTHLEEMQHTISNDEEKSAAVVNAISLYMRHLGVRTKSGDKK
SGRNFFRKKMIGNRRSDEPTKTKKGLSSFLDAARWNRGEPQAPDFRHLKVEVDAEKPGLT
ERKGGQGAPSRDRNLGGPGQDSPGVSLHPLSGDSPDREPGVDALLEVGDPPPQGPASLDT
PAPPETAEEGADTERLSGRLGRSESLRVSDRRRPSRGSLGAKGRGGGRSRSDVDMDPSSA
TAVLGPARRATPEPGDEGEPGRSGLELEPEEPPGWRELVPQDILHSLPRSQVKRQEVISE
LLVTEAAHVRMLRVLHDLFYQPMAEGGYFSQQELQTIFPSLDELIEVHSLFLDCLMKRRQ
DSGYLVEEIGDVLLARFDGAEGSWFQKISSRFCSRQSFALEQLKSKQRKEPRFCTFVQEA
ESRPRCRRLQLKDMIPTEMQRLTKYPLLLQSIAQNTEESAEREKVERAAECCREILQHVN
YAVRDMEDLLRLKDYQRRLDLTHLRQSNDPMLSEFKNLDITRKRLIHEGPLTWRVTKDKA
VEVHVLLLDDLLLLLQRQDDRFLLKSHSRTLTPTPDGKTMLRPVLRLTSAMTREVATDHK
AFYVIFTWDHEAQIYELVAQTVSERRIWCTIITETAGCLKVPAPTSRPKHRPGPSSTREP
LLSSSENGNGSREMPPVDGRMERLFNSLLPFCRQGLEGQLAAKALQKVLTLKQLLLPSEE
DSGAGPPLEGDGVPGGGPSSPTQHQEIREELLSLEETIKQLEEVEEEFCRLRLLLSQLGE
NSVPQSGCT
NT seq
2910 nt
NT seq
+upstream
nt +downstream
nt
atggaggcagaagacggcgcccgaggggcgcccccagggcccccccgacccggcctggtg
cccgtcagcatcatcggggcagaggacgaggattttgagattgagttgaagacgaacccc
gaggaacaaaacaaccagttccagaacctggatcaggtgaagcggcgcccggcccatctc
atggccctcctgcagcacgtggccatgcagtttgagccaggacccctgctctgctgcctg
catgcggacatgctcggctccctgggccccaaggagttcaagaaggccttcatcgacttc
taccacagcttcctggataagcactcgattctacgagtgatggtccctccctccgtggcc
tttgaacttgaccgcacgcggcctgacctcttccctgaggacctccagcgacagttcgtg
caggaggtggtgcagagccagcaggtagccgtggtccggcagctggaggactttcgctcc
aagaagctcatgggcatgacaccctgggagcaggagctggcccagctgggggcctgggtg
gcgcgggaccgtgccagctatgaggcccgggagcggcacctggctgagcggcaactgacc
cacctggaggagatgcagcacaccatctctaatgatgaggagaagagtgctgctgtggtc
aatgccatcagcctgtacatgcggcaccttggggtgcggaccaagagtggggacaagaag
tccgggaggaatttctttcggaaaaagatgatagggaaccggcggtcagatgaaccgaca
aagaccaagaaaggcctgagcagcttcctagatgccgcccgctggaaccggggagagccc
caggccccagattttcgacacctgaaggtcgaggttgatgctgagaagccgggccttaca
gaacgtaagggaggtcagggggcgccttcccgggaccggaatctcggaggccctgggcag
gacagccctggagtttctctgcaccctctgtctggggacagccctgaccgggagccaggt
gttgatgccctcctggaggtgggggacccgcccccgcagggcccagccagcctggacacc
ccagcgcccccagagaccgcggaggagggtgccgacacagagaggctgtcagggcgtctg
gggcgctcagagagcctgcgggtgagtgaccgccgccggccttcccggggcagcctcggg
gctaagggccggggtgggggccgctcccggagcgacgtggacatggaccccagctccgcc
acggccgtgcttggccctgcccgacgagccaccccggagcctggagacgagggggagccg
ggccgttcgggactagagctggaaccggaggagccgcctggctggcgagagcttgtcccc
caggacattctgcacagcctgcctaggagccaggtgaagcggcaggaggtcatcagcgag
ctcctggtgacggaggcggcccatgtgcgcatgctccgcgtgctccacgacctcttctat
cagcccatggcagaggggggctacttctcccagcaggagctccagaccatcttccccagc
ctggacgagctcatcgaggtgcattccctattccttgattgcctgatgaagcggaggcag
gacagtggctacctcgtcgaggagatcggagatgtgctgctggcccggttcgatggtgcc
gagggctcgtggttccagaagatctcctcccgcttctgcagccgccagtcattcgcctta
gagcagctcaaaagcaaacagcgcaaggaaccccggttctgtaccttcgtgcaggaagcc
gagagccggccccggtgccgccggctgcagctcaaggacatgatccccacggagatgcag
cgtctgaccaagtacccgctgcttctgcagagcatcgcgcagaatacagaagagtcagcg
gaacgggagaaagtggagcgggcagccgagtgttgccgggaaattctgcaacacgtcaac
tatgccgttcgggacatggaggacctgctgcggctcaaggattatcagaggcgcctggat
ttgacccacctgcggcagagcaatgaccccatgctgagcgaattcaagaacttagacatc
accaggaagaggctgatccacgagggcccactgacgtggagggtgacgaaggacaaggct
gtggaggtgcacgtgctgctgctggatgacctgctgctgctgcttcagcgccaggacgac
cggttcttgcttaagtcgcacagccggacgctgacgcccacgcccgacggcaagaccatg
ctgcggccggtgctgcggctcacctccgccatgacccgcgaggtggccaccgatcacaaa
gccttctatgtcatttttacctgggaccatgaggcccagatatacgagctggtggcgcag
acagtgtccgagaggaggatctggtgtaccatcatcaccgagactgctggatgcctgaag
gtccccgcccccacctcccgaccaaaacaccggcccggccccagcagcacccgtgaaccc
ctgcttagcagctccgaaaacggcaatggcagccgagagatgcccccagtggatggccgg
atggagagactcttcaactccctcctgcccttctgcagacaaggccttgagggccagctc
gctgccaaggcccttcagaaagtgctgaccctgaaacagctcctgttgccttcggaggaa
gacagcggggcaggacctcccctcgagggggatggggtcccagggggcggtccctcaagc
ccaacgcagcatcaggaaattcgggaggagctgctcagcctggaggagaccattaagcag
ctggaggaggtggaggaggagttttgccgcctgagactcctcctgtctcagcttggggag
aacagcgtcccccagtctggctgtacctga
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