Odocoileus virginianus (white-tailed deer): 110125898
Help
Entry
110125898 CDS
T10722
Symbol
SCN4A
Name
(RefSeq) sodium channel protein type 4 subunit alpha isoform X1
KO
K04837
voltage-gated sodium channel type IV alpha
Organism
ovr Odocoileus virginianus (white-tailed deer)
Brite
Ion channels [BR:
ovr04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
110125898 (SCN4A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
110125898
NCBI-ProteinID:
XP_070335903
LinkDB
All DBs
Position
17:49552778..49585803
Genome browser
AA seq
1688 aa
AA seq
DB search
MFIMITILTNCVFMTMSDPPSWSKHVEYTFTGIYTFESLIKILARGFCIDDFTFLRDPWN
WLDFSVIMMAYLTEFVDLGNISALRTFRVLRALKTITVIPGLKTIVGALIQSVKKLSDVM
ILTVFCLSVFALVGLQLFMGNLRQKCVRWPPPFNDTNGTWYGNDTWDSNNTWNGQESWAS
NYTFDWDAYINDEGNFYFLEGSNDALLCGNSSDAGHCPEGYECIKAGRNPNYGYTSYDTF
SWAFLALFRLMTQDYWENLFQLTLRAAGKTYMIFFVVIIFLGSFYLINLILAVVAMAYAE
QNEATLAEDQEKEEEFQQMLEKFKKQQEELEKAKAAQALEGGEVDGDPAHSKDCNGSVDT
SAGEKGPPRPSCGTDSGISDAMEELEEAHQKCPPWWYKCSHKVLIWNCCTPWVKFKKIIH
LIVMDPFVDLGITICIVLNTLFMAMEHYPMTEHFDSVLNVGNLVFTGIFTAEMVLKLIAM
DPYEYFQQGWNIFDSIIVTLSLVELGLANVQGLSVLRSFRLLRVFKLAKSWPTLNMLIKI
IGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKECVCKIAADCSLPRWHMHDFFHSFL
IVFRILCGEWIETMWDCMEVAGQAMCLTVFLMVMVIGNLVVLNLFLALLLSSFSADSLAA
SDEDGEMNNLQIAIARIKWGIGFAKAFLVGLLHGKVLSPKVIMLSLGSIGEGGEAGEAPE
SAPEDEKKEPPPEEDGKDLKKDNHILNHMGLADGPPPSIELDHLNFINNPYLTIHVPIAS
EESDLEMPTEEETDTFSEPEDVKKPLQPLDGNSSVCSTADYKPPEDDPEEQAEENPDGEQ
PEECFTEACVQRFPFLYVDISQGRGKKWWTLRRACFKIVEHNWFETFIVFMILLSSGALA
FEDIHIEQRRVIRTILEYADKVFTYIFILEMLLKWVAYGFKVYFTNAWCWLDFLIVDVSI
ISLVANWLGYSELGPIKSLRTLRALRPLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLI
FWLIFSIMGVNLFAGKFYYCINTTTSERFEVDEVNNKSECESLMHTGQVRWLNVKVNYDN
VGLGYLSLLQVATFKGWMDIMYAAVDSREKEEQPMYEVNLYMYLYFVIFIIFGSFFTLNL
FIGVIIDNFNQQKKKFGGKDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPQNKIQGLVYDL
VTKQAFDITIMILICLNMVTMMVETDDQSQLKVDILYNINMVFIIIFTGECVLKMLALRQ
YYFTVGWNIFDFVVVILSIVGLALSDLIQKYFVSPTLFRVIRLARIGRVLRLIRGAKGIR
TLLFALMMSLPALFNIGLLLFLVMFIYSIFGMSNFAYVKKEAGIDDMFNFETFGNSIICL
FEITTSAGWDGLLNPILNSGPPDCDPNLENPGTSVRGDCGNPSIGICFFCSYIIISFLIV
VNMYIAIILENFNVATEESSEPLGEDDFEMFYETWEKFDPDATQFIDYSRLSDFVDTLQE
PLRIAKPNKIKLITLDLPMVPGDKIHCLDILFALTKEVLGDSGEMDALKETMEEKFMAAN
PSKVSYEPITTTLKRKHEEVCAIKIQRAYRRHLLQRSVKQASYMYRHNHDGGGDGAPEKE
GLIADTMSKMYGPDNGNSGVPSKEEERGSAGDPGPAMGLRPISPSDAPLPPAPPPGQTVR
PGVKESLV
NT seq
5067 nt
NT seq
+upstream
nt +downstream
nt
atgttcattatgatcaccatcctgaccaactgcgtgttcatgaccatgagtgacccgcct
tcctggtccaagcacgtggagtacaccttcacagggatctacaccttcgagtccctcatc
aagatcctggcccgaggtttctgcatcgatgacttcacattcctccgggatccctggaac
tggctggacttcagcgtcatcatgatggcgtacctgacggaatttgtggacttgggcaac
atctcagcgctgagaaccttccgggtgctgcgggccctgaaaaccatcacggtcatccca
gggctgaagaccatcgtgggggccctgatccagtcggtgaaaaagctctcggacgtgatg
atcctcaccgtcttctgcctgagcgtctttgccctggtggggctgcagctcttcatggga
aacctgcggcagaagtgtgtgcgctggcccccgcccttcaatgacaccaacggcacgtgg
tacggcaacgacacctgggacagcaacaacacctggaatggccaggagagctgggccagc
aactatacctttgactgggatgcctacatcaatgatgaagggaacttctatttcctggag
ggctccaacgacgccctgctctgtgggaacagcagcgatgctgggcattgccctgagggt
tacgagtgcatcaaggctgggcggaaccccaactacggctacaccagctatgacaccttc
agctgggccttcctggccctcttccgcctcatgacacaggactactgggagaacctcttc
cagctgacccttcgagcagccggcaagacctacatgatctttttcgtggtcatcattttc
ctgggctccttctacctcatcaacctgatcctggccgtggtggccatggcctatgctgag
cagaacgaggccaccctggccgaagatcaggagaaagaagaggagtttcagcagatgctg
gagaaattcaaaaaacagcaggaggagctggagaaggccaaggctgcccaggctctggaa
ggtggggaggtggacggggacccagcacacagcaaagactgcaatggcagcgtggacaca
tcggcaggggagaaggggcctccaaggccaagctgtggcacagacagtggcatttccgat
gccatggaagagctggaagaggcccaccagaaatgcccaccatggtggtacaaatgttcc
cataaagtgctcatatggaactgctgcactccgtgggtgaagttcaagaagatcatccac
ctgatcgtcatggacccgttcgtggacctgggcatcaccatctgcatcgtgctcaacacc
ctcttcatggccatggagcattacccgatgacagaacactttgacagtgtgctcaatgtg
ggcaacctggtcttcacaggcatcttcacggctgagatggtgctgaagctcattgccatg
gacccctacgagtacttccaacagggctggaacatctttgacagtatcatcgtcaccctc
agcctggtggagctgggcctggccaacgtgcaggggctatcggttctccgctccttccgg
ctgctgagggtcttcaagctggccaagtcatggccgacgctgaacatgctcatcaagatc
atcggcaactcggtgggggcgctgggcaacctgacactggtgctggccatcattgtgttc
atcttcgccgtggtgggcatgcagctgtttggcaaaagctacaaggagtgcgtgtgcaag
atcgccgcggactgcagcctgccccgctggcacatgcacgacttcttccactccttcctc
atcgtcttccgcatcctctgcggagagtggatcgagactatgtgggactgcatggaggtg
gctggtcaggccatgtgcctcactgtcttcctcatggtcatggtcatcggcaacctggtg
gtcttgaacctgttcttggccctgctgctcagctccttcagtgctgacagcctggcagcc
tcggatgaggatggcgagatgaacaacctgcagattgccatcgctcgcatcaagtggggc
atcggcttcgccaaagccttcctcgtggggctgcttcatggcaaagtcctgagccccaag
gttatcatgctcagcctcggaagcatcggcgagggtggggaggccggcgaggctccggag
agcgcccccgaggacgagaagaaggagcctccacccgaggaggatggcaaggacctcaag
aaggacaaccacatcctgaaccacatgggtctggctgacggccctccccccagcatcgag
ttggaccacctcaactttatcaacaacccctacctgaccatccacgtgcccatcgcctcc
gaggagtctgacctggagatgcccacagaggaggaaaccgacaccttctccgagcctgag
gatgtcaagaagccgctgcagcccctggacgggaactcctccgtctgcagcactgccgac
tacaagccccccgaggacgaccccgaggagcaggccgaggagaaccccgatggggagcag
ccggaggagtgcttcaccgaggcctgcgtgcagcgctttcccttcctctacgtggacatc
tcccagggtcgagggaagaagtggtggaccctccgcagggcgtgcttcaagatcgtcgag
cacaactggttcgagaccttcattgtcttcatgatcctgctcagcagtggggccttggcc
ttcgaggacatccacatcgagcagcggcgagtcatccgcaccatcctggaatatgccgac
aaggtcttcacctacatcttcatcctggagatgctgctcaagtgggtggcctacggcttc
aaggtgtacttcaccaatgcctggtgctggctcgacttcctcatcgtggacgtctccatc
atcagcctggtggccaactggctgggctactcggagctgggacccatcaaatccctgcgg
acgctgagggccctgcgccccctgagggccctgtctcgattcgagggcatgagggtggtg
gtgaatgccctcctgggggccatcccctccatcatgaacgtgctgcttgtctgcctcatc
ttctggctcatcttcagcatcatgggcgtcaacctatttgccggcaagttctactactgc
atcaacaccaccacctccgagcggttcgaagtcgacgaggtcaacaacaagtccgagtgc
gagagcctgatgcacacgggccaggtccgctggctcaacgtcaaggtcaactacgacaac
gtgggtctgggctacctctccctcctgcaggtggccaccttcaagggctggatggacatc
atgtatgccgccgtggactcccgggagaaggaagagcagccgatgtacgaggtgaacctc
tatatgtacctctatttcgtcatcttcatcatcttcggctccttcttcaccctcaacctc
ttcattggcgtcatcatcgacaacttcaaccagcagaagaagaagtttggagggaaagac
atcttcatgacagaggaacagaagaaatactataacgccatgaagaagcttggctccaag
aagcctcagaagccaattccccggccccagaacaagatccagggcctggtgtatgacctg
gtgacaaagcaggcatttgacatcacgatcatgatcctcatctgcctcaacatggtcacc
atgatggtggagacggatgaccagagccagctcaaggtggacatcctgtacaacatcaac
atggtcttcatcatcatcttcacaggcgagtgcgtgctcaagatgctggccctgcgccag
tactacttcaccgtcggctggaatatcttcgacttcgtggttgtcatcctgtccattgtg
ggcctggcgctctcagatctgatccagaaatacttcgtgtcacccacgctgttccgtgtg
atccgcctggcgcggatcgggcgggtcctgaggctgatccgcggggccaagggcatccgg
acgctgctcttcgcgctcatgatgtcgctgcccgccctcttcaacatcggcctcctcctc
ttcctggtcatgttcatctactccatcttcggcatgtccaacttcgcctacgtcaagaag
gaggcgggcattgatgacatgtttaacttcgagaccttcggcaacagtatcatctgtctc
ttcgagatcaccacgtcggctggctgggacgggctcctcaaccccatcctcaacagcggg
ccccccgactgtgaccccaacctggaaaacccgggcaccagcgtccggggcgactgtggt
aatccctccatcggcatctgcttcttctgcagctacatcatcatttccttcctcatcgtg
gtcaacatgtacatcgccatcatcctggagaacttcaacgtggccacggaggagagcagc
gagcctctcggggaggatgactttgagatgttctatgagacgtgggaaaagtttgacccc
gatgccacgcagttcattgactacagccgcctctctgactttgtggacaccctgcaggag
ccactgaggatcgccaagcccaacaagatcaagctcatcacgctggacctgcccatggtg
ccgggagacaagatccactgcctggacatcctctttgccctgaccaaagaagtcctgggc
gactctggggagatggatgccctcaaggagaccatggaggagaagttcatggccgccaac
ccctccaaggtctcctatgagcccatcaccaccacactcaagaggaagcatgaggaagtg
tgtgccatcaagatccagagggcctaccgccggcatctgctgcagcgctccgtgaagcag
gcatcctacatgtaccgccacaaccatgacggcggtggggatggggcccccgagaaggag
gggctgattgctgacaccatgagcaagatgtacggccccgacaacgggaacagcggtgtg
ccaagcaaagaggaggagaggggctccgcaggggaccccggacctgccatggggctcagg
cccatcagcccctccgacgcacccctccctcctgccccacccccggggcagacggtgcgc
ccaggggtcaaagagtctctcgtctag
DBGET
integrated database retrieval system
