KEGG   Odocoileus virginianus (white-tailed deer): 110126940
Entry
110126940         CDS       T10722                                 
Symbol
RBX1
Name
(RefSeq) E3 ubiquitin-protein ligase RBX1
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
ovr  Odocoileus virginianus (white-tailed deer)
Pathway
ovr03420  Nucleotide excision repair
ovr04066  HIF-1 signaling pathway
ovr04110  Cell cycle
ovr04114  Oocyte meiosis
ovr04120  Ubiquitin mediated proteolysis
ovr04141  Protein processing in endoplasmic reticulum
ovr04310  Wnt signaling pathway
ovr04350  TGF-beta signaling pathway
ovr04710  Circadian rhythm
ovr05170  Human immunodeficiency virus 1 infection
ovr05200  Pathways in cancer
ovr05211  Renal cell carcinoma
Brite
KEGG Orthology (KO) [BR:ovr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    110126940 (RBX1)
   04120 Ubiquitin mediated proteolysis
    110126940 (RBX1)
  09124 Replication and repair
   03420 Nucleotide excision repair
    110126940 (RBX1)
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    110126940 (RBX1)
   04350 TGF-beta signaling pathway
    110126940 (RBX1)
   04066 HIF-1 signaling pathway
    110126940 (RBX1)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    110126940 (RBX1)
   04114 Oocyte meiosis
    110126940 (RBX1)
 09150 Organismal Systems
  09159 Environmental adaptation
   04710 Circadian rhythm
    110126940 (RBX1)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    110126940 (RBX1)
  09162 Cancer: specific types
   05211 Renal cell carcinoma
    110126940 (RBX1)
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    110126940 (RBX1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ovr04121]
    110126940 (RBX1)
   03400 DNA repair and recombination proteins [BR:ovr03400]
    110126940 (RBX1)
Enzymes [BR:ovr01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     110126940 (RBX1)
Ubiquitin system [BR:ovr04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   110126940 (RBX1)
  Multi subunit type E3
   SCF complex
    Ring finger protein
     110126940 (RBX1)
   Cul2 complex
     110126940 (RBX1)
   Cul3 complex
     110126940 (RBX1)
   Cul4 complex
     110126940 (RBX1)
   Cul7 complex
     110126940 (RBX1)
   Cul8 complex
     110126940 (RBX1)
   Cul9 complex
     110126940 (RBX1)
DNA repair and recombination proteins [BR:ovr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      110126940 (RBX1)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      110126940 (RBX1)
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4 zf-C3HC4_2 zf-RING_11 DUF8003
Other DBs
NCBI-GeneID: 110126940
NCBI-ProteinID: XP_020732539
UniProt: A0A6J0W9H8
LinkDB
Position
23:8988765..9001646
AA seq 108 aa
MAAAMDVDTPSGTNSGAGKKRFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQ
ASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWEFQKYGH
NT seq 327 nt   +upstreamnt  +downstreamnt
atggcggcagcgatggatgtggataccccgagcggcaccaacagcggcgcgggcaagaag
cgctttgaagtgaaaaagtggaatgcagtagccctctgggcctgggatattgtggttgat
aactgtgccatctgcaggaaccacattatggatctttgcatagaatgtcaagccaaccag
gcgtctgctacttctgaagagtgcaccgtggcgtggggcgtctgtaaccatgcttttcac
ttccactgcatctctcgctggctcaaaacacggcaggtgtgtccgttggacaacagagag
tgggaattccaaaagtatgggcactag

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