Odocoileus virginianus (white-tailed deer): 110132914
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Entry
110132914 CDS
T10722
Symbol
BRCA1
Name
(RefSeq) breast cancer type 1 susceptibility protein isoform X1
KO
K10605
breast cancer type 1 susceptibility protein [EC:
2.3.2.27
]
Organism
ovr Odocoileus virginianus (white-tailed deer)
Pathway
ovr01524
Platinum drug resistance
ovr03440
Homologous recombination
ovr03460
Fanconi anemia pathway
ovr04120
Ubiquitin mediated proteolysis
ovr04151
PI3K-Akt signaling pathway
ovr05206
MicroRNAs in cancer
ovr05224
Breast cancer
Brite
KEGG Orthology (KO) [BR:
ovr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
110132914 (BRCA1)
09124 Replication and repair
03440 Homologous recombination
110132914 (BRCA1)
03460 Fanconi anemia pathway
110132914 (BRCA1)
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
110132914 (BRCA1)
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
110132914 (BRCA1)
09162 Cancer: specific types
05224 Breast cancer
110132914 (BRCA1)
09176 Drug resistance: antineoplastic
01524 Platinum drug resistance
110132914 (BRCA1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ovr01009
]
110132914 (BRCA1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ovr04121
]
110132914 (BRCA1)
03036 Chromosome and associated proteins [BR:
ovr03036
]
110132914 (BRCA1)
03400 DNA repair and recombination proteins [BR:
ovr03400
]
110132914 (BRCA1)
Enzymes [BR:
ovr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110132914 (BRCA1)
Protein phosphatases and associated proteins [BR:
ovr01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
110132914 (BRCA1)
Ubiquitin system [BR:
ovr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
110132914 (BRCA1)
Multi subunit type E3
BRCC complex
110132914 (BRCA1)
Chromosome and associated proteins [BR:
ovr03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
110132914 (BRCA1)
DNA repair and recombination proteins [BR:
ovr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
110132914 (BRCA1)
BRCA1-A complex
110132914 (BRCA1)
BRCA1-B complex
110132914 (BRCA1)
BRCA1-C complex
110132914 (BRCA1)
BRCA complex
110132914 (BRCA1)
FA (Fanconi anemia) pathway
Downstream FA components
110132914 (BRCA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT_assoc
BRCT
zf-C3HC4
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_3
zf-C3HC4_4
zf-RING_2
zf-RING_5
RING_XB3-XBAT31
zf-RING_6
BRCT_2
zf-Nse
zf-ANAPC11
zf-RING_10
zf-rbx1
Prok-RING_4
Baculo_IE-1
Motif
Other DBs
NCBI-GeneID:
110132914
NCBI-ProteinID:
XP_020742187
UniProt:
A0A6J0WZV5
LinkDB
All DBs
Position
17:39720194..39790347
Genome browser
AA seq
1858 aa
AA seq
DB search
MDLSVDHVEEVQNVLNAMQKILECPICLELIREPVSTKCDHIFCKFCMLKLLNQKKGPSQ
CPLCKNDITKRSLQESTRFSQLVEELLKIIHAFELDTGLQFANSYNFSRKENKSPEHLKE
EVSIIQSMGYRNRAKRLWQSEPENPTLQETSLTVELSNLGIVRSLRTKQQIQSQNKSVYI
ELGSDSSEDTVNKASYFSVGDHELLEITPQGAKAETNLNPAKKAACEFSEKDITNAEHHQ
FSIKDLITTQKHATETHPEKYQGISVSNFHVEPCGTDAHASSLQHENSSLLLTENRLNVE
KAEFCNKSKQSVLVKSQQSRWAESKGTCKDRQVLSTGEKIVLNADPLYRRKELRKQKPAC
PDSPRDSQDVPWATLNNSIQKVNEWFSRSDEILTSDDSCNGGSESNNEVAGAVEIPNKVD
GYSGSSEKIDLKASDPHGVLIHERIHSKPVESNIEDKIFGKTYRRKSSLPNFSHVAEDLI
IGAFTVEPQKEQPLTNKLKCKRRGASGLQPEDFIKKVDLTIVPKTPVKMTEGTDQTEQKG
HGMTITSDGHENKTKHDYVQKEQNANPTESLEKESVFRAKAEPISINISNMELDLNIHSS
KAPKNRLKRKSSTRKIPELELVVSRNPSPPNHIELPIDSCSSSEEMKKKHSSQMPVRQGQ
KLQLMGDKEPIAGAKKSNKAYEQINKRLASDAFPELNLANTPGYFTNCSSSNKLEEFVHP
SLQREENLGTIQVSNSTKDPKDLILRGGKALQIERSVESTNISLVPDTDYSTQDSISLLE
ANTPEKAKTAPNPCVSLCAAIENPKELIHGDFKGTKNDTERFQDLLGHDVNCVIQETSGE
MEDSELDTQYLQNTFKVSKRQTFALFSNPGNPQKECTTVFAHSGSLRDQSPRDPLKCRQK
EDSRGKNESKSQHVQAICTTVHFPVAGQKDRTLGDDAKCSAKEVTKLCQSSQLRGHKTEL
VFANKHGISEKTFLIPLLSPIKSSVKTICKKSPSEKFEEPLMSPERTRGSESIIQSAVST
ISENNIQENTFKEVSSSSVNEVGSSTNEVGSSINEVGSSGENIQAEPGRNREPKLRALLR
LGLTQPEVYKQSLPVSNCHHPEIKRQGVNEDMLQAVKADLSPCLISDNLEQPMGSCHASQ
VCSETPDNLLDDDEIKENSHLAESDIKERSAVFSESVQKGEFRGSPGPFTHTHLTQDHQR
GAGKLESEEIVSSEDEELPCFQQLLFGKVTNTLSPSTGRNTVATEGLSKETEENLESLKS
GLNDRSGQVTSAKVSQEHHLNEEARCSSSLFSSQCSAMEDLTTNTNTQDPFLMFEHPSKQ
VYQCESEEFLSDKELVSDDEERETGLEEDSCQEEQSVDSDLDEAASNHVSETSLSEDCVG
LSSQSDILTTQQRDTMQDNLLKLQQEMAELEAVLERHGSQPSHSSASLTDDSRGPEHLLN
PEQNTSERAILTSEKSRDYSRSQNPESLSADKFPVSLDSSTNKNKEPGMEGSSPSKFQLL
YNRWYVHSHSRSLQERNCPSQKEPSNVADMEEQQLAKCEAQDLMGSYLPRQDQEGTPYLK
SGISLFSQDLESDPSEDRAPEPAHVHSMPPSASALKLSQFRVEESTKSPAAAHITNTTGC
NLREESVSKEKPEVISSTERSNKRLSMVASGLTPKELMLVQKFARKHHVTLTNLITEETT
HVIMKTDPEFVCERTLKYFLGIAGGKWVVSYFWVIQSIKERKMLDEHDFEVRGDVVNGRN
HQGPKRARKSQDKKIFKGLEICCYGPFTNMPTDQLEWMVQLCGASVVKEPSSFTPGQGTH
PVVVVQPDAWTEDAGFHVIRQMCEAPVVTREWVLDSVALYHCQELDTYLVPQVPQSWC
NT seq
5577 nt
NT seq
+upstream
nt +downstream
nt
atggatttatctgtggatcatgttgaggaagtacaaaatgtccttaatgctatgcagaaa
atcttagagtgtccaatatgtctggaattgatcagagagcctgtctctacaaagtgtgac
cacatattttgcaaattttgtatgctgaaacttctcaaccagaagaaagggccttcacag
tgtcctttgtgtaagaatgatataaccaaaagaagcctacaagaaagtacaagatttagt
caacttgttgaagagctgttgaagatcattcatgcttttgagcttgacacaggattgcag
tttgcaaacagctataacttttcgagaaaggaaaataagtctcctgagcatctgaaggag
gaagtttctatcatccaaagtatgggctaccggaaccgggccaaaagactttggcagagt
gaacctgaaaatcctaccttgcaggaaaccagtcttactgtcgaactctctaaccttgga
attgtgagatctctgaggacaaagcagcagatacaatctcagaataagtccgtctacatt
gaattgggatctgattcttctgaagacacagttaataaggccagttatttcagtgtggga
gaccatgaattgttagaaatcacccctcaaggagccaaggcagagaccaatttgaatcct
gcaaaaaaggctgcttgtgagttttctgagaaggacataacaaatgctgaacatcatcaa
ttcagtattaaagatctgatcaccacccagaagcatgcaactgagacgcatccagaaaag
tatcagggtatttcagtttcaaactttcacgtggagccatgtggcacagatgctcatgcc
agctcattacagcatgagaacagcagtttattactcactgaaaacagactgaatgtagaa
aaggctgaattctgtaataaaagcaaacagtctgtcttagtaaagagccaacagagcaga
tgggctgagagtaagggcacatgtaaggataggcaggttctcagcactggggaaaagata
gttctgaatgccgatcccctgtacagaagaaaagaactgcgtaagcagaaacctgcatgc
cctgacagtcctagagattcccaagatgttccttgggcaaccctgaataatagcatacag
aaagttaatgaatggttttccagaagtgatgaaatattaacttctgatgactcatgcaat
ggtgggtctgaatcaaataatgaagtagctggtgcagtggaaattccaaataaagttgat
ggatattcaggttcttcagagaaaatcgacttaaaggccagtgatcctcatggtgtttta
atacatgaaagaatccactctaaaccagtagagagtaatattgaagataaaatatttggg
aaaacctatcggaggaagtcaagtctccctaacttcagccacgtagctgaagatctaatt
ataggcgcatttactgtagaacctcagaaagagcagcccctcacaaataaactaaagtgt
aaaaggagaggtgcatcaggccttcagcctgaggattttatcaagaaagtcgatttgaca
attgttccaaagactcctgtaaagatgactgagggaactgaccaaacagagcagaaaggt
catgggatgactattactagtgatggtcatgagaataaaacaaaacatgattatgttcag
aaagagcaaaacgctaacccaacagaatcattggaaaaagaatctgttttcagagctaag
gctgaacctataagcatcaatataagcaatatggaactagacttgaatatccacagttca
aaagcacctaagaataggctgaagaggaagtcctctaccaggaaaattcctgaacttgaa
ctagtagtcagtagaaacccaagtccacctaatcatattgagctaccaattgatagctgt
tctagcagtgaagagatgaagaaaaaacattctagccaaatgccagtcaggcagggccaa
aagcttcaactcatgggagataaagaacctatagctggagccaagaagagtaacaaagcg
tatgaacaaataaataaaagacttgctagtgatgcctttccagaactaaatttagcaaac
acacctggttattttactaactgttctagttctaataaacttgaagagtttgttcatcct
agccttcaaagagaggagaatctaggaacaattcaagtgtcaaatagtaccaaagatccc
aaagatctgatattaagaggaggaaaagctttgcaaattgaaagatctgtagagagtacc
aatatttccttggttcctgatactgattatagcactcaggatagtatctcattactggaa
gctaacaccccagagaaggcaaagactgcaccaaatccttgtgtgagtctgtgtgcagca
atcgaaaaccccaaggaacttatccatggggattttaaaggtaccaaaaatgacacagag
cgctttcaggatctactgggacatgacgttaactgcgtcattcaggagacaagtggagaa
atggaagacagtgaacttgatacacagtatttgcagaatacgttcaaggtttcaaagcgt
cagacatttgctctgttttcaaatccaggaaatccgcaaaaggaatgtaccacagtcttt
gcccactcggggtccttaagggatcaaagtccaagagaccccctcaaatgcaggcaaaaa
gaagatagtcggggaaagaatgagtctaaaagccagcatgtgcaggccatttgtacaaca
gtgcactttcctgtggctggtcagaaagacaggacgctgggtgacgatgccaaatgtagt
gcaaaagaagtaactaagctttgtcagtcatcacagttgagaggccacaaaactgaactt
gtttttgcaaataaacatgggatttcagaaaaaacatttcttataccattactttctccc
atcaagtcatctgttaaaaccatatgtaagaaaagcccatcagagaagtttgaggaacct
ctaatgtcacctgaaagaacgcggggaagtgagagcatcattcaaagtgcagtgagcaca
atcagcgaaaataacattcaagaaaacacttttaaagaagtcagctcaagcagtgttaat
gaagtaggttccagtactaatgaagtaggctctagtattaatgaagtaggttccagtggt
gaaaacattcaagcagaaccaggtagaaacagagaacctaaattaagagctttactcaga
ttaggtcttacgcagcctgaagtctataagcaaagtcttcctgtaagtaactgtcaccat
cctgaaataaaaaggcaaggagtaaatgaggacatgcttcaggctgttaaggcagactta
tccccatgtctaatttcagataatctcgaacaacctatgggaagctgtcatgcttctcag
gtttgttctgagacacctgacaacttgttagatgatgatgaaataaaagaaaatagccac
ttagctgaaagtgacattaaggaaagatctgctgtttttagtgaaagtgtccaaaaagga
gaattcagagggagccctggccctttcacccatacccatttgactcaggatcaccaaaga
ggggctggaaaactggagtcagaagagattgtgtctagtgaggatgaagagcttccctgc
ttccaacaattattgtttggtaaagtaaccaatacgctctctccatctaccggacgtaac
actgttgccactgagggtctgtctaaggaaacagaggagaacctagaatcattgaagagt
ggcttaaatgaccgcagtggccaggtaacatcagccaaggtgtcccaggaacatcacctt
aatgaggaagcgagatgttctagtagcttattttcctcacagtgcagtgcaatggaagac
ttgaccactaatacaaacacccaggatcctttcttgatgtttgagcatccttccaaacaa
gtgtatcagtgtgaaagcgaggaatttctgagtgacaaggaattggtttcagatgatgaa
gaaagggaaaccggcttggaagaagatagttgccaagaagagcagagtgtggattcggac
ttagatgaagcagcatccaaccatgtgagtgaaacaagcctctctgaagactgtgtgggg
ctgtcttctcagagtgatatcttaaccactcagcagagggataccatgcaagataaccta
ctaaagctccagcaggaaatggccgagctggaagctgtgttagagcggcacgggagccag
ccttcccacagctctgcttccctcacagatgattctcgtggcccagagcacctgctaaat
ccagagcaaaacacatcagaaagagcaatattaacttcagagaaaagtagagactattct
agaagccagaatcctgaaagcctctctgctgacaagtttccagtatctctggatagttct
accaataaaaataaagaaccaggaatggaagggtcttccccttctaaattccagttgttg
tataataggtggtatgtgcacagccactcaaggagtcttcaggaaagaaactgcccatct
caaaaggagcccagtaatgttgctgacatggaggagcaacagctggctaagtgtgaggcc
caagatttaatggggtcttatttgccaagacaagatcaagagggaaccccttacctgaaa
tctggaatcagcctcttctctcaagacctcgagtctgatccctctgaagacagagcccca
gagccagctcatgttcatagcatgccaccctctgcctctgcactgaaattatcccaattt
cgagtagaagaatctaccaagagtccagctgctgctcacattactaatactacagggtgt
aacctgagggaagaaagtgtgagcaaagagaagccagaagtgatatcttcaacagaaaga
agcaacaaaagactttctatggtggcatcaggcttgaccccaaaagaacttatgcttgtg
cagaaatttgccagaaaacatcacgtcactttaactaatctaattactgaagagactact
catgtcattatgaaaacagatcctgagtttgtgtgtgaacggacactgaaatattttctg
ggaattgcaggaggaaaatgggtagttagctatttttgggtcatccagtctattaaagaa
agaaagatgctggatgagcatgattttgaagtcagaggagatgttgtcaatggaagaaac
catcaaggcccaaagcgagcaagaaaatcccaagacaagaagatcttcaagggcctagag
atctgttgctatggaccttttaccaatatgcccacagatcaactagagtggatggtgcag
ctgtgtggggcttctgtggtgaaggagccctcgtcattcaccccaggccagggtactcac
ccagttgtggtcgtgcagccagatgcctggacagaggatgctggcttccatgtgatcagg
cagatgtgtgaagcacctgtggtaacacgagagtgggtactggacagtgtggccctctac
cattgccaggagctggacacatacctggtcccccaggtcccccagagctggtgctga
DBGET
integrated database retrieval system
