KEGG   Odocoileus virginianus (white-tailed deer): 110145233
Entry
110145233         CDS       T10722                                 
Symbol
SMNDC1
Name
(RefSeq) survival of motor neuron-related-splicing factor 30 isoform X1
  KO
K12839  survival of motor neuron-related-splicing factor 30
Organism
ovr  Odocoileus virginianus (white-tailed deer)
Pathway
ovr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ovr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    110145233 (SMNDC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ovr03041]
    110145233 (SMNDC1)
Spliceosome [BR:ovr03041]
 Complex A
  U2 snRNP components
   U2 related factors
    110145233 (SMNDC1)
 Complex B
    110145233 (SMNDC1)
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    110145233 (SMNDC1)
SSDB
Motif
Pfam: SMN_Tudor TUDOR
Other DBs
NCBI-GeneID: 110145233
NCBI-ProteinID: XP_020761098
UniProt: A0A6J0YHE8
LinkDB
Position
7:complement(13271629..13283188)
AA seq 238 aa
MSEDLAKQLASYKAQLQQVEAALSGNGENEDLLKLKKDLQEVIELTKDLLSTQPSETLAS
SDNFASTQPTHSWKVGDKCMAIWSEDGQCYEAEIEEIDEENGTAAITFAGYGNAEVTPLL
NLKPVEEGRKAKEDSGNKPMSKKEMIAQQREYKKKKALKKAQRIKELEQEREDQKVKWQQ
FNNRAYSKNKKGQVKRSIFASPESVTGKVGVGTCGIADKPMTQYQDTSKYNVRHLMPQ
NT seq 717 nt   +upstreamnt  +downstreamnt
atgtcagaggatctagcaaagcagctggcaagctacaaagctcaactccagcaagttgag
gctgcgctgtctggaaatggagaaaatgaagatttactaaaattaaagaaagatttacaa
gaggttattgaactaaccaaagaccttctatcaactcagccttctgaaactctggcaagt
tcagacaactttgcttctactcagcccactcattcatggaaagtgggagacaagtgtatg
gcaatctggagtgaagatggacagtgttatgaagcggagattgaggagatagatgaagaa
aacggcaccgctgcaatcacttttgctggctatggcaatgctgaagtgactccactgttg
aacctcaagcctgtagaagaaggaaggaaggcaaaggaagacagtggcaacaaacccatg
tcaaaaaaagaaatgattgcccagcagcgtgaatataaaaagaagaaagctttgaaaaaa
gcacagagaataaaagaacttgaacaagaaagagaggaccagaaggtgaaatggcaacag
ttcaacaacagagcctattctaaaaacaaaaaaggccaggtaaagaggagtatttttgct
tcacctgagagcgtcactggcaaagttggagtgggaacttgtggaatcgctgataaacct
atgacacagtatcaggatacctccaaatacaatgttcggcatttgatgccgcaatag

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