Odocoileus virginianus (white-tailed deer): 110145941
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Entry
110145941 CDS
T10722
Symbol
RFNG
Name
(RefSeq) beta-1,3-N-acetylglucosaminyltransferase radical fringe isoform X1
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
ovr Odocoileus virginianus (white-tailed deer)
Pathway
ovr00514
Other types of O-glycan biosynthesis
ovr04330
Notch signaling pathway
ovr05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
ovr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
110145941 (RFNG)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
110145941 (RFNG)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
110145941 (RFNG)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ovr01003
]
110145941 (RFNG)
Enzymes [BR:
ovr01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
110145941 (RFNG)
Glycosyltransferases [BR:
ovr01003
]
Glycan extension
O-Glycan
110145941 (RFNG)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fringe
Motif
Other DBs
NCBI-GeneID:
110145941
NCBI-ProteinID:
XP_020762134
UniProt:
A0A6J0YKB8
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All DBs
Position
17:complement(47312047..47316192)
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AA seq
344 aa
AA seq
DB search
MSRARGALCRACLALAAALGALLLLPLPLPRAPAPAPAPTRALVPGSGPRAPPARPATAP
RLRPDDVFIAVKTTRKNHGPRLGLLLRTWISRARQLTFIFTDGDDPELQLQGGGHVINTN
CSAVHTRQALCCKMSVEYDKFIESGRKFLHVPRWFCHVDDDNYVNPKGLLQLLSTFSPSQ
DIYLGRPSLDHPIEATERIQGGGTVTTVKFWFATGGAGFCLSRGLALKMSPWASLGGFMS
TAERVRLPDDCTVGYIVEGLLGARLLHSSLFHSHLENLQKLPPDTLLQQVTLSYGGPENP
HNVVNVAGGFSLQQDPTRFKSIHCLLYPDTDWCPLQKQSHLAPR
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgagccgcgcgcggggggcgctttgccgggcctgcctcgcgctggccgcggccctgggt
gcgctgctgcttttgccgttgccgctgccccgcgcacctgcgcccgcgccagccccgacc
cgggccttggtccccggctctggcccgcgcgcgccccctgcccggcccgccaccgccccc
cgcctgcggccggacgacgtcttcatcgcggtcaagaccacccgaaaaaaccacgggccg
cgcctgggactactgctgcgcacttggatctcccgggcccgacagctgacgtttatcttt
accgacggggacgaccctgaactacagctccagggaggtggccacgtcatcaacaccaac
tgctccgccgtgcatacccgccaggctctgtgctgcaagatgtcagtggaatacgacaag
tttattgagtctggacgcaaatttctacacgttcccaggtggttctgccacgtggatgat
gacaattatgtgaaccccaaaggcctgctgcagctgctgtccaccttctcacctagccag
gacatctacctggggcggcccagcctggaccaccccatcgaggctactgagaggatccag
ggaggtggaaccgtgaccacggtcaagttctggttcgctactggtggggccgggttctgc
ctaagcagaggccttgctctcaagatgagcccatgggccagcctgggcggcttcatgagc
acagccgagcgggtgcggctgccagacgactgcacggtgggctacatcgtggaggggctg
ctgggcgcccgcctgctgcatagctcactgttccactcccacctggagaacctacagaag
ctgccacctgacaccctgctccagcaggtcactttgagctacgggggacccgagaaccct
cataacgtggtgaatgtggctgggggcttcagcctgcagcaggatcccacacggtttaag
tccatccactgccttctctacccggacacggactggtgtcctttgcagaagcagagccac
ctcgctcctcggtga
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