KEGG   Odocoileus virginianus (white-tailed deer): 110146721
Entry
110146721         CDS       T10722                                 
Symbol
TNF
Name
(RefSeq) tumor necrosis factor isoform X1
  KO
K03156  tumor necrosis factor superfamily, member 2
Organism
ovr  Odocoileus virginianus (white-tailed deer)
Pathway
ovr01523  Antifolate resistance
ovr04010  MAPK signaling pathway
ovr04060  Cytokine-cytokine receptor interaction
ovr04061  Viral protein interaction with cytokine and cytokine receptor
ovr04064  NF-kappa B signaling pathway
ovr04071  Sphingolipid signaling pathway
ovr04150  mTOR signaling pathway
ovr04210  Apoptosis
ovr04217  Necroptosis
ovr04350  TGF-beta signaling pathway
ovr04380  Osteoclast differentiation
ovr04612  Antigen processing and presentation
ovr04620  Toll-like receptor signaling pathway
ovr04621  NOD-like receptor signaling pathway
ovr04622  RIG-I-like receptor signaling pathway
ovr04625  C-type lectin receptor signaling pathway
ovr04640  Hematopoietic cell lineage
ovr04650  Natural killer cell mediated cytotoxicity
ovr04657  IL-17 signaling pathway
ovr04660  T cell receptor signaling pathway
ovr04664  Fc epsilon RI signaling pathway
ovr04668  TNF signaling pathway
ovr04920  Adipocytokine signaling pathway
ovr04930  Type II diabetes mellitus
ovr04931  Insulin resistance
ovr04932  Non-alcoholic fatty liver disease
ovr04933  AGE-RAGE signaling pathway in diabetic complications
ovr04936  Alcoholic liver disease
ovr04940  Type I diabetes mellitus
ovr05010  Alzheimer disease
ovr05014  Amyotrophic lateral sclerosis
ovr05020  Prion disease
ovr05022  Pathways of neurodegeneration - multiple diseases
ovr05132  Salmonella infection
ovr05133  Pertussis
ovr05134  Legionellosis
ovr05135  Yersinia infection
ovr05140  Leishmaniasis
ovr05142  Chagas disease
ovr05143  African trypanosomiasis
ovr05144  Malaria
ovr05145  Toxoplasmosis
ovr05146  Amoebiasis
ovr05152  Tuberculosis
ovr05160  Hepatitis C
ovr05161  Hepatitis B
ovr05163  Human cytomegalovirus infection
ovr05164  Influenza A
ovr05165  Human papillomavirus infection
ovr05166  Human T-cell leukemia virus 1 infection
ovr05168  Herpes simplex virus 1 infection
ovr05169  Epstein-Barr virus infection
ovr05170  Human immunodeficiency virus 1 infection
ovr05171  Coronavirus disease - COVID-19
ovr05205  Proteoglycans in cancer
ovr05310  Asthma
ovr05321  Inflammatory bowel disease
ovr05322  Systemic lupus erythematosus
ovr05323  Rheumatoid arthritis
ovr05330  Allograft rejection
ovr05332  Graft-versus-host disease
ovr05410  Hypertrophic cardiomyopathy
ovr05414  Dilated cardiomyopathy
ovr05417  Lipid and atherosclerosis
ovr05418  Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:ovr00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    110146721 (TNF)
   04350 TGF-beta signaling pathway
    110146721 (TNF)
   04064 NF-kappa B signaling pathway
    110146721 (TNF)
   04668 TNF signaling pathway
    110146721 (TNF)
   04071 Sphingolipid signaling pathway
    110146721 (TNF)
   04150 mTOR signaling pathway
    110146721 (TNF)
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    110146721 (TNF)
   04061 Viral protein interaction with cytokine and cytokine receptor
    110146721 (TNF)
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    110146721 (TNF)
   04217 Necroptosis
    110146721 (TNF)
 09150 Organismal Systems
  09151 Immune system
   04640 Hematopoietic cell lineage
    110146721 (TNF)
   04620 Toll-like receptor signaling pathway
    110146721 (TNF)
   04621 NOD-like receptor signaling pathway
    110146721 (TNF)
   04622 RIG-I-like receptor signaling pathway
    110146721 (TNF)
   04625 C-type lectin receptor signaling pathway
    110146721 (TNF)
   04650 Natural killer cell mediated cytotoxicity
    110146721 (TNF)
   04612 Antigen processing and presentation
    110146721 (TNF)
   04660 T cell receptor signaling pathway
    110146721 (TNF)
   04657 IL-17 signaling pathway
    110146721 (TNF)
   04664 Fc epsilon RI signaling pathway
    110146721 (TNF)
  09152 Endocrine system
   04920 Adipocytokine signaling pathway
    110146721 (TNF)
  09158 Development and regeneration
   04380 Osteoclast differentiation
    110146721 (TNF)
 09160 Human Diseases
  09161 Cancer: overview
   05205 Proteoglycans in cancer
    110146721 (TNF)
  09172 Infectious disease: viral
   05166 Human T-cell leukemia virus 1 infection
    110146721 (TNF)
   05170 Human immunodeficiency virus 1 infection
    110146721 (TNF)
   05161 Hepatitis B
    110146721 (TNF)
   05160 Hepatitis C
    110146721 (TNF)
   05171 Coronavirus disease - COVID-19
    110146721 (TNF)
   05164 Influenza A
    110146721 (TNF)
   05168 Herpes simplex virus 1 infection
    110146721 (TNF)
   05163 Human cytomegalovirus infection
    110146721 (TNF)
   05169 Epstein-Barr virus infection
    110146721 (TNF)
   05165 Human papillomavirus infection
    110146721 (TNF)
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    110146721 (TNF)
   05135 Yersinia infection
    110146721 (TNF)
   05133 Pertussis
    110146721 (TNF)
   05134 Legionellosis
    110146721 (TNF)
   05152 Tuberculosis
    110146721 (TNF)
  09174 Infectious disease: parasitic
   05146 Amoebiasis
    110146721 (TNF)
   05144 Malaria
    110146721 (TNF)
   05145 Toxoplasmosis
    110146721 (TNF)
   05140 Leishmaniasis
    110146721 (TNF)
   05142 Chagas disease
    110146721 (TNF)
   05143 African trypanosomiasis
    110146721 (TNF)
  09163 Immune disease
   05310 Asthma
    110146721 (TNF)
   05322 Systemic lupus erythematosus
    110146721 (TNF)
   05323 Rheumatoid arthritis
    110146721 (TNF)
   05321 Inflammatory bowel disease
    110146721 (TNF)
   05330 Allograft rejection
    110146721 (TNF)
   05332 Graft-versus-host disease
    110146721 (TNF)
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    110146721 (TNF)
   05014 Amyotrophic lateral sclerosis
    110146721 (TNF)
   05020 Prion disease
    110146721 (TNF)
   05022 Pathways of neurodegeneration - multiple diseases
    110146721 (TNF)
  09166 Cardiovascular disease
   05417 Lipid and atherosclerosis
    110146721 (TNF)
   05418 Fluid shear stress and atherosclerosis
    110146721 (TNF)
   05410 Hypertrophic cardiomyopathy
    110146721 (TNF)
   05414 Dilated cardiomyopathy
    110146721 (TNF)
  09167 Endocrine and metabolic disease
   04930 Type II diabetes mellitus
    110146721 (TNF)
   04940 Type I diabetes mellitus
    110146721 (TNF)
   04936 Alcoholic liver disease
    110146721 (TNF)
   04932 Non-alcoholic fatty liver disease
    110146721 (TNF)
   04931 Insulin resistance
    110146721 (TNF)
   04933 AGE-RAGE signaling pathway in diabetic complications
    110146721 (TNF)
  09176 Drug resistance: antineoplastic
   01523 Antifolate resistance
    110146721 (TNF)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:ovr04052]
    110146721 (TNF)
   00536 Glycosaminoglycan binding proteins [BR:ovr00536]
    110146721 (TNF)
Cytokines and neuropeptides [BR:ovr04052]
 Cytokines
  Tumor necrosis fators
   110146721 (TNF)
Glycosaminoglycan binding proteins [BR:ovr00536]
 Heparan sulfate / Heparin
  Cytokines
   110146721 (TNF)
SSDB
Motif
Pfam: TNF
Other DBs
NCBI-GeneID: 110146721
NCBI-ProteinID: XP_020763327
UniProt: A0A6J0YQD5
LinkDB
Position
27:complement(43045168..43047850)
AA seq 234 aa
MSTKSMIRDVELAEEALSKKAGGPQGSRSCLCLSLFSFLLLAGATTLFCLLHFGVIGPQR
EEQSPTGLSINSPLVQTLRSSSQASINKPVAHVVANINAQGQLLWLDSCANALMANGVKL
EDNQLVVPTDGLYLIYSQVLFRGQSCPSTPLFLTHTISRIAVSYQTKVNILSAIKSPCHR
ETPEWAEAKPWYEPIYQGGVFQLEKGDRLSAEINLPDYLDYAESGQVYFGIIAL
NT seq 705 nt   +upstreamnt  +downstreamnt
atgagcaccaaaagcatgatccgggacgtggagctggcggaggaggcgctctccaagaaa
gcagggggcccccagggctccagaagttgcttgtgcctcagcctcttctccttcctcctg
cttgcaggagccaccacgctcttctgcctgctgcacttcggggtaatcggcccccagagg
gaagagcagtccccaactggcctctccatcaacagccctctggttcagaccctcaggtca
tcttctcaagcctcaattaacaagccggtagcccacgttgtagccaacatcaatgctcag
gggcagctcctgtggttggattcatgtgccaatgccctcatggccaacggtgtgaagttg
gaagacaaccagctggtggtgcctactgatgggctttacctaatctactcccaggtcctc
ttcaggggccaatcctgcccttccacccccttgttcctcacccacaccatcagccgcatt
gcagtctcctaccagaccaaggtcaacatcctctctgccatcaagagcccttgccacagg
gagaccccagagtgggctgaagccaagccctggtacgaacccatctaccagggaggggtc
ttccagctggagaagggagatcgcctcagtgctgagatcaacctgccggactacctggac
tatgccgagtctggacaggtctactttgggatcatcgctctgtga

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