Oxynema aestuarii: HCG48_00200
Help
Entry
HCG48_00200 CDS
T06528
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
oxy
Oxynema aestuarii
Pathway
oxy01501
beta-Lactam resistance
oxy01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
oxy00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
HCG48_00200
01503 Cationic antimicrobial peptide (CAMP) resistance
HCG48_00200
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
oxy02000
]
HCG48_00200
01504 Antimicrobial resistance genes [BR:
oxy01504
]
HCG48_00200
Transporters [BR:
oxy02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
HCG48_00200
Antimicrobial resistance genes [BR:
oxy01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
HCG48_00200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF_C
MMPL
NMB0315_dom_I
Motif
Other DBs
NCBI-ProteinID:
QIZ69201
UniProt:
A0A6H1TRN3
LinkDB
All DBs
Position
complement(46040..49294)
Genome browser
AA seq
1084 aa
AA seq
DB search
MSTPHSDTAVVPEPEPKRGIIGQITAYFINSQVTVLAIAAVVIFGLAAVILTPKEENPQI
VVPAADIFLRYPGAPAEVVEKTLTTPVEAKIRELTGVEHIYSVSQNSGSKVTVQFFVGED
WEDSLFKLQNHLYNWQDIFPPGTTYLVKPVIIDDVPIVTLTVTGKDYTDNQLRRVGERLL
EDLRSIPNTANLTIAGGQPRTIRVDLDPDRLASYRLSPAAIAQRLQGENVQLPAGDLAIG
DNRLFVEGGSLFESADDLKETIVGFGENRSPIYLRDVAVVSDDFGDRTTYSRIHTREDWD
VSNPYPDRDLQPTEPFTEQNAITIGIAKKKGTNAVTVAKQIFDRIDELKADLPSGIEIAV
TRNDGRTAARAVGDLYTSLFQAIAIVVALLVIFLGWREASIVAFVIPLTLAGTLAVGWIA
GQTINRITLFALILVLGTLVDDAIAVTENIHRRFELRPGMNFNEKMEEAIAAVSELGAPV
ILSTITVILAFIPMRFVTGMMGPYMAPMPFNLPVAMLISTFMALTVTPFLALRWIKLKAN
HHEPPPLEETATYRWYRRLIEPLLDSATRRRFFILFIVGILLATFSLPLTQAVQFRMLPK
ADKDRFLIQVDMPLGTELVQTDRVVRQMETVLQDDPAVTNFETYVGIGSPVDFNGLLRGS
SDRTGEHYADIRVHLTNSDARKETSEDVVFRLREPLSEIARNHNGIVKLVEDPPGPPVRS
TMLAELYGPDYPTLRSLAKDVREVFAETDEVVDIDDSVKNQMPQVELAVDRQKVNQAGLT
TQEIAQTLNMAIAGANVSTLKVPGELTPVAIQVRFAEKHRQAIEDLARIQIPTAAGELVP
LTELVQFTPTTVDEPIFHKDQRPVAYVMGEMGDRSSVYAVIDQLIYFWKNPLPEGYSINW
DGEWKLTLDVFRDLGLAMLVAVMLIYFILVGQFGSFKIPLIILGSIPLALIGILIGFSLN
GVYFSATAMIGVIALAGIVVRNAIVLLEFVGEKLKEEGNDLKLAILEAGAVRFRPILLTS
VTTMLGTLSILSDPVWSGLAWTLLCGMLTSSFLTLVAIPLMYYGDRLGHLKAKKYEAKSL
ALES
NT seq
3255 nt
NT seq
+upstream
nt +downstream
nt
atgtctacgcctcactcagatactgctgtcgtcccggaaccggaaccgaaacggggaatt
atcggacaaatcacggcgtattttatcaattctcaggtcacggtgctggcgatcgcagcc
gtggtaattttcggactggctgcggtgattttgacgccgaaggaagaaaacccacaaatc
gtggttccggcggcagatatctttttgcgctatcccggcgccccggctgaagtggtcgag
aaaacgctgacgacgcccgtagaagcgaagatccgggaactcacgggggtcgagcatatt
tattcagtatcgcagaattccgggtcgaaggtgacggtgcagtttttcgtgggggaagac
tgggaagattcgttattcaaactgcaaaatcacttatataactggcaagatatctttccg
ccggggacgacgtatttagtcaaacccgtgattatcgacgacgtaccgatcgtgaccctg
acggtgacggggaaagattacacggacaatcagttgcgacgggtgggggaacggctgtta
gaggatttacgcagtattccgaatacggcgaatttgacgatcgcgggaggacaaccgcgc
acgattcgcgtcgatttagaccccgatcgcctcgccagttatcgcctgtccccggcggcg
atcgcccaacgcttgcaaggggagaacgtgcagcttcccgccggagatctggcgatcgga
gacaatcgcttatttgtcgaaggcggtagcctgttcgagtcggcggacgacctcaaagaa
acgatcgtcggctttggcgagaaccgatcgccgatctacctgcgcgacgtagcagtcgtg
agcgatgatttcggcgatcgcaccacctattcgcgcattcatacccgggaagattgggac
gtctccaacccttaccccgatcgcgacttgcagccgaccgaaccctttacagaacaaaac
gcgattacgatcggcatcgccaagaaaaaaggcaccaacgcggtgaccgtcgccaaacaa
attttcgaccggatcgacgaattaaaagccgacttacccagtggcatcgaaatcgccgtg
actcgtaacgacggacgcaccgcagcgcgcgccgtcggcgacctgtacaccagcttgttt
caggcgatcgcgatcgtcgtcgccttgctggtgatcttcctcgggtggcgcgaagcctcg
atcgtcgccttcgtgattcccctgaccttagccggaacccttgccgtcggctggatcgcg
ggacagacgatcaaccgaattaccctgtttgccttgattctcgtcctcggaaccttggta
gacgacgcgatcgccgtcaccgagaacatccaccgccgcttcgaactgcgtccggggatg
aacttcaacgaaaaaatggaagaggcgatcgccgccgtcagcgaacttggcgccccggtc
atcctctccacgattaccgtgatcctcgccttcatccccatgcgcttcgtcaccgggatg
atggggccgtacatggcgccgatgccgttcaacctcccggtcgccatgctgatcagcacc
ttcatggccctgaccgtgaccccgtttctcgccttgcgctggattaaattaaaagcgaat
caccacgaaccgccgccgttggaagaaaccgcaacctatcgctggtatcggcgccttatc
gaacccttgctcgattcggcaacccgccgccgtttctttatcctatttatcgtcggcatt
ctcttagcgacctttagtttgcccttaacccaggcggtgcagtttcggatgttgccgaaa
gccgacaaagaccgctttttgattcaagtagacatgcctttggggaccgaactggtgcaa
accgatcgcgtcgtccgccaaatggaaacggtgttgcaagacgaccccgccgtcaccaac
ttcgagacctatgtcggtatcggatcccccgtcgattttaacggcttgttgcgcgggtcg
agcgatcgcaccggggaacattatgcggatattcgggtgcatttaactaactcggacgcg
cgcaaagagacctcagaagacgtggtattccgcttgcgcgaaccgttgagcgaaattgcc
cgcaatcataacgggattgttaaattagtcgaagatccccccggaccgcccgtgcgatcg
accatgttagccgaattgtacggaccggattatccgacgttgcgatcgctggcgaaagac
gtgcgcgaggtgttcgccgaaaccgatgaagtggtcgatatcgacgattccgttaaaaat
cagatgccgcaagtggagttagccgtcgatcgccaaaaagtgaatcaggcgggactgacg
acccaggaaattgcccaaacgttgaatatggcgatcgccggggccaacgtatcgaccctc
aaagttcccggcgaactcactcccgtagcgattcaagtgcgctttgcggaaaaacaccgt
caggcgatcgaagatttggcccgcatccaaattcccaccgccgccggagaattagttccc
ctgacggaattggtccagtttacgccgaccaccgtggacgaaccgattttccataaagat
cagcgtcccgtcgcctacgtgatgggagaaatgggcgatcgctccagcgtttacgcggtc
atcgaccagttaatttatttttggaaaaacccccttcccgagggctattccattaactgg
gacggggaatggaaactgaccctagacgtgttccgcgatttggggttggcgatgttagta
gcggtgatgttgatttattttattttggtcggtcaattcggcagctttaaaattcccctg
attattttagggagtattcccctggcgttaatcgggattttaatcggtttttcgctcaat
ggcgtttattttagtgcgacggcgatgatcggcgtgattgctttggcgggaattgtggtg
cgtaatgcgatcgttttgttggagtttgtgggagagaaattaaaagaagaaggcaacgat
ttaaaattggccattctcgaagcaggcgccgttcggtttcgtccgattttattgacgagc
gtaacgacgatgttgggaacgctttcaattttgagcgacccggtgtggtcggggttggcc
tggaccttactttgcgggatgttaacctcttcgtttttaacgttggtcgcgatccccttg
atgtattacggcgatcgcctcggacatttgaaagcgaaaaaatatgaggcaaaatcccta
gccttagaaagttaa
DBGET
integrated database retrieval system
