Oxynema aestuarii: HCG48_08855
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Entry
HCG48_08855 CDS
T06528
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
oxy
Oxynema aestuarii
Pathway
oxy01501
beta-Lactam resistance
oxy01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
oxy00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
HCG48_08855
01503 Cationic antimicrobial peptide (CAMP) resistance
HCG48_08855
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oxy03036
]
HCG48_08855
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
oxy02000
]
HCG48_08855
01504 Antimicrobial resistance genes [BR:
oxy01504
]
HCG48_08855
Chromosome and associated proteins [BR:
oxy03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
HCG48_08855
Transporters [BR:
oxy02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
HCG48_08855
Antimicrobial resistance genes [BR:
oxy01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
HCG48_08855
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_3
HlyD_D23
Biotin_lipoyl_2
Biotin_lipoyl
PTS_EIIA_1
HlyD_2
Peptidase_M23
Motif
Other DBs
NCBI-ProteinID:
QIZ70675
UniProt:
A0A6H1TW51
LinkDB
All DBs
Position
complement(2181002..2182582)
Genome browser
AA seq
526 aa
AA seq
DB search
MQSLDDRHWHPPKSLPLLLGGLVVIVASSSAAGWWLANTVQREPVESAAVATTPEAIAVR
VAPAIEQTTQADRSAIGSTEAIDTVTVTSRVMGQIQRLSVEEGDRVSQGDILVEIDAKDI
QAESNRATAAIAQAQASVTVARSAQIQAIAGKNQAVAARSQAEAQFNQAIANRNQAQAQK
RQAQAERERAIAAKREAEAQLSEAEAELADAKLHQQRMSLLYSQGAISESQLDTANTRVS
VIEARIGQIEAGIDQADRAVAQTEAGIEQAEAAIAQAEAGVERARSQVSQADAAIEQAQG
AVDQAEASIAQARAGVEQAQASQEQTIANLDYGTVKAPFDGVVTRKHTEVGAMAGPGQPL
VTLESTEKLRFSAAIPESFVKQVRQGDDFEVEFDAIDRVVSGQVTQIIPSADPTAHNFTV
KIALEYEPDLIPGMFGRIRLSAKPSVGEQGAYWSALSVPKTAIVERMGITGVYKVVDDRA
RFQAIATGSETGDRVEVFSGLERGDRVILQPSADLKDGTTVTVTNS
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgcagagtttagacgatcgccactggcacccccccaaatctttaccgttactcctcggc
ggacttgtcgtgattgtcgccagttcctcggcagcaggctggtggttggcgaatacagtc
caacgggaacccgtcgaatcagccgccgtggcgacgaccccggaagcgatcgccgtccgg
gtcgccccggcgatcgaacaaacgacccaagccgatcgcagcgccatcggcagcacggaa
gcgatcgacaccgtaaccgtgaccagtcgggtgatggggcagattcaacgcttatccgta
gaagaaggcgatcgcgtgagccagggagatattttggtcgagatcgacgccaaagatatc
caagctgaaagcaatcgggccaccgccgcgatcgcccaagctcaagcctccgtgaccgtg
gcgcgatcggcgcaaatccaggcgatcgccggaaaaaatcaagccgtcgccgcgcgatcg
caagccgaagcccaattcaatcaagcgatcgccaatcgcaaccaggcgcaagcgcaaaag
cggcaagcgcaagccgaacgagaacgggcgatcgccgccaaacgcgaagccgaagcgcaa
ctgagcgaagccgaagccgaactcgccgacgccaaattacatcaacagcgcatgagcttg
ttatattcccaaggcgcgatcagcgagtcccaactcgacactgccaatacccgcgtcagc
gtcatcgaagcgcgcatcgggcaaattgaagcgggaatcgaccaagccgaccgcgcggtc
gcccaaaccgaagcgggaatcgaacaagcggaagcggcgatcgcccaagctgaggcggga
gtcgaacgggctcggtctcaagtgagccaagcggacgcggcgatcgaacaagctcaaggg
gccgtagaccaagccgaagccagcatcgcccaagcccgcgccggagtcgaacaagcccaa
gccagccaagaacagacgatcgccaatttagattacggtacggtcaaggcgcccttcgat
ggcgtcgtcacccgcaaacataccgaagtcggcgccatggcggggccgggacaaccgtta
gtcaccctcgaaagtacggaaaaattgcgctttagcgccgccatccccgaatccttcgtc
aaacaagtgcgccagggagacgatttcgaggtcgagttcgacgcgatcgatcgcgtcgta
agcggacaagtcacccagattatcccctccgccgacccgaccgctcacaactttaccgtc
aaaattgccctggagtacgagccggatttgattcccggaatgttcggacgtatccgcctg
agtgcgaaaccttccgtcggcgagcaaggggcgtactggagcgccttaagcgttcccaaa
acggcgatcgtcgaacgcatggggattacgggggtgtataaagtggttgacgatcgcgcc
cgcttccaggcgatcgccacgggtagcgaaacgggcgatcgggtcgaagtgttttccggt
ttggaacgcggcgatcgcgtcatcctccaaccctccgccgacttgaaagatggcacgacc
gtgaccgtcaccaactcgtag
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