Polycladomyces abyssicola: JIR001_22440
Help
Entry
JIR001_22440 CDS
T07192
Symbol
metC-2
Name
(GenBank) cystathionine gamma-synthase
KO
K01760
cysteine-S-conjugate beta-lyase [EC:
4.4.1.13
]
Organism
pabs
Polycladomyces abyssicola
Pathway
pabs00270
Cysteine and methionine metabolism
pabs00450
Selenocompound metabolism
pabs01100
Metabolic pathways
pabs01110
Biosynthesis of secondary metabolites
pabs01230
Biosynthesis of amino acids
Module
pabs_M00017
Methionine biosynthesis, aspartate => homoserine => methionine
Brite
KEGG Orthology (KO) [BR:
pabs00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
JIR001_22440 (metC-2)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
JIR001_22440 (metC-2)
Enzymes [BR:
pabs01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.13 cysteine-S-conjugate beta-lyase
JIR001_22440 (metC-2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cys_Met_Meta_PP
Aminotran_1_2
DegT_DnrJ_EryC1
Aminotran_5
Met_gamma_lyase
Beta_elim_lyase
AsnC_trans_reg
Motif
Other DBs
NCBI-ProteinID:
BCU82461
UniProt:
A0A8D5UHC3
LinkDB
All DBs
Position
complement(2202638..2203801)
Genome browser
AA seq
387 aa
AA seq
DB search
MKFATRLLHNGNEICPRTGAASIPMYLASTYHQFDLDQPGRYDYARSGNPTREALEKTIA
ALEGGSHGFAFSSGMSAVSTVLLLFSNGDHLVASQDLYGGTYRVMAEVLPRLGITVDFVD
TTDLNRVEAAIRPNTKGIYIETPSNPTLKVTDIAGTAEIARRHGALLIVDNTFLSPVYQN
PLLLGADIVIHSATKFIGGHSDVVAGLVAVKDPTLAERIGFLQNAIGAVLGVQDAWLVLR
GIKTLKTRMDTATRSAETIAQALANHPEVHRVYYTGLPSHPGHRLQCQQSSGHGAVLSFD
VGSGERAREVLSRVRLPIVAVSLGAVESILSYPAKMSHAAMPQHVRERHGITDGLLRLSV
GLEDVEDLLNDLEQALSVRSVSVASNR
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttgcgacccgattgctccacaatggtaacgagatttgcccccgtacgggggcg
gccagtatacccatgtatctcgcatccacctatcatcagtttgatttggatcaaccggga
cggtacgattatgcgcggtcgggcaatccgacgcgggaagcgctggagaagaccatcgcc
gcgctggagggaggctcccatggatttgcgttttcgtcggggatgtcagccgtctccacg
gtattgctgctgttttccaacggggatcatctcgtggcttcccaggatttgtatggcggc
acgtatcgggtgatggccgaagtgctgccccggttgggcatcacggttgactttgtggat
acgacggatctgaaccgggtagaggcggcgattcgtcccaacaccaagggaatttacatc
gaaacaccttccaaccccaccttgaaggtgacggatattgccggcacggcagaaattgcc
cgacgtcacggtgcgctgctgattgtggataacacgtttttgagcccggtctatcagaat
ccgttgctgttgggggcagatatcgtcattcacagtgcaaccaaattcattggtgggcac
agtgacgtcgtggccggtttggtggcagtaaaagatcctaccttggcggaacggatcggt
ttcctgcaaaacgcgatcggtgcggtattgggtgtgcaggatgcctggttggtcctcagg
gggatcaaaacactcaaaacccggatggatactgccacccgttccgcagaaacaatcgcc
caggcgttagcgaatcaccccgaagtacatcgggtgtattacacaggacttccctcacac
cctggccaccgtttgcaatgtcaacaatccagtggacatggtgcagttctgtcgttcgac
gtcggatccggggaacgggcgcgggaggtgttgagtcgcgtacgtctgcccatcgtggcg
gtcagcttgggtgcggtggaaagcatcctctcctatccggccaagatgtcccatgctgcg
atgccccaacatgtccgggagcgacatgggatcaccgacggattgctccggctgtccgtc
ggactggaggatgtggaagacctgttgaacgatttggagcaggcattgtcggtccgatcg
gtttcggtcgcttccaaccgatga
DBGET
integrated database retrieval system