KEGG   Salipiger abyssi: Ga0080574_TMP2622
Entry
Ga0080574_TMP2622 CDS       T04681                                 
Name
(GenBank) CRISPR system Cascade subunit CasD
  KO
K19125  CRISPR system Cascade subunit CasD
Organism
paby  Salipiger abyssi
Brite
KEGG Orthology (KO) [BR:paby00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:paby02048]
    Ga0080574_TMP2622
Prokaryotic defense system [BR:paby02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Subtype I-E factors
    Ga0080574_TMP2622
SSDB
Motif
Pfam: Cas_Cas5d DUF6732
Other DBs
NCBI-ProteinID: APZ52956
UniProt: A0A1P8UUD2
LinkDB
Position
2036023..2036727
AA seq 234 aa
MPEHLIFQLVATIGAMGEFAGHDRRGSLGLPGRSSVIGLLGAALGRRRDHEFSDLEALGI
AVASFGRTGHLRDYHTVQTVPSAAVKSPQSRPQALREAAAKGRVNTVLTSRDYRTECVFG
VAVWGGDLPALAAALRQPVFQVFLGRKSCPLSAPFDPQRVTADDPAQALAHLRLPPWIGA
RQMVEIVAEEGVGLGAPARLETRHDRTVDRERRHFGPGRYSVAHPALSAGEVPS
NT seq 705 nt   +upstreamnt  +downstreamnt
atgcctgaacatctgatctttcaactcgttgcgacgatcggcgccatgggcgaattcgca
gggcacgaccggcgtggatcccttggcctgcctggccgatcgtcggtgatcgggctgctg
ggcgcggcgctggggcgcaggcgggaccacgagttttccgatctggaggcgttggggatc
gcggtggccagctttggacgcaccggccatctgcgggattaccatacggtgcagacagtg
ccgtcggcggcggtgaaatccccgcaatcgcgtccgcaggcgctgagggaggcggcggcg
aaaggccgggtgaacaccgtcctgaccagccgcgactaccgcacggagtgcgtgttcggc
gtggcggtctggggcggtgatctgcctgcgctggccgcggcgttgaggcagccggtcttt
caggtgttcctcgggcgcaagtcctgtccgctctccgccccgttcgatccgcaacgggtg
acggcggacgatcccgcgcaggccctggcgcatctgcgcctgccgccgtggatcggggca
aggcagatggtcgagatcgtggcggaggagggtgtcggccttggtgcgcccgcgcggctg
gaaacccgtcacgaccggaccgtcgaccgcgagagacggcatttcgggccggggcgctac
agcgtggcacatcccgctctctctgcgggggaggtgccgtcatga

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