Cutibacterium acnes KPA171202: PPA1626
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Entry
PPA1626 CDS
T00188
Name
(GenBank) DNA ligase
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
pac
Cutibacterium acnes KPA171202
Pathway
pac03030
DNA replication
pac03410
Base excision repair
pac03420
Nucleotide excision repair
pac03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PPA1626
03410 Base excision repair
PPA1626
03420 Nucleotide excision repair
PPA1626
03430 Mismatch repair
PPA1626
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pac03032
]
PPA1626
03400 DNA repair and recombination proteins [BR:
pac03400
]
PPA1626
Enzymes [BR:
pac01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
PPA1626
DNA replication proteins [BR:
pac03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
PPA1626
DNA repair and recombination proteins [BR:
pac03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
PPA1626
NER (nucleotide excision repair)
GGR (global genome repair) factors
PPA1626
MMR (mismatch excision repair)
DNA ligase
PPA1626
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
PPA1626
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_aden
OB_DNA_ligase
HHH_2
Nlig-Ia
BRCT
HHH_5
DNA_ligase_ZBD
HHH
PGRL1_N
PTCB-BRCT
NHase_beta_N
BRCT_2
Motif
Other DBs
NCBI-ProteinID:
AAT83363
UniProt:
Q6A7A2
LinkDB
All DBs
Position
complement(1764008..1766326)
Genome browser
AA seq
772 aa
AA seq
DB search
MHPGGQAILFATDLDESSSVNAQLCELRKDGTMVDDSTQGGELEASEAGAEARHHWTELA
QRILDAQDAYYARDAPTISDAEYDRLMVELKKVEDDHPELRTPDSPTQRVGAPQRITDFA
PVKHLERLLSLDNVFTRDELSEWMNRVATAVGKIPNFLCELKIDGLAVDLVYRDGQLVSG
ATRGDGRIGEDVTANVRTIAAIPRKLTGDDVPRLLEVRGEVFFPVADFTDLNAALIEAGK
NPFANPRNAAAGSLRQKDSRVTASRPLSMIVHGIGVLEGHDFPSQGHAYDKLAQWGLPVS
PYFKIVEHVDEVHEFVTRWGESRDEASHQIDGVVVKVDDVSLQRKLGATSRAPRWAIAYK
YPPEEVNTELLDIRVNVGRTGRVTPYGVMRPVTVAGSTVEMATLHNAFEVKRKGVLIGDT
VVLRKAGDVIPEILGPVVELRNGTEREFLMPDHCPSCGAELAYEKNGDKDLRCPNAQGCP
SQLHERVFGLASRGALDIEALGWEAAIALTDPENQRPGDDEVAEELPKRQTAVLSSEAGL
FDLQLDDLAEIKVWRRRKVNGGPGPWQLEPYFFTKATAKKPSTPTATTKKMFDELAKAKS
QPLWRVLVALSIRHVGPTAARALATHFGSVEAIREASVEELAGVDGVGEIIAESVKRWFE
VDWHQEIISRWAAAGVRMADDRDEAPEQTLEGLTVVVTGSLEGFSRDEAKEAIVSRGGKA
AGSVSRKTDYVVVGENAGSKETKARDLGRPILDEAGFRYLLENGPQGITTIG
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
gtgcatcccggtggccaggcaattctctttgcaacggacctggacgaaagctcgtcggtg
aatgcacaactatgtgaactgcgcaaagatgggactatggttgacgattccacccaaggt
ggcgagctggaggcgagcgaggctggggccgaagcgcgccaccactggactgagttggcc
cagcgcatccttgacgcccaggacgcttactatgcccgcgacgctcccacgatctctgat
gccgaatacgaccggcttatggttgaactcaagaaggtggaggacgaccatccggagttg
cgcactcccgactcgcccactcagcgggttggagctccacaacggataacagatttcgcc
ccggtcaaacacctcgaacggctactgagcctggacaacgtctttacccgcgacgaactg
tcagaatggatgaacagggtcgctactgccgtcggaaagatcccgaatttcctctgcgag
ctgaagattgacgggttggcggtcgacctcgtctaccgagacgggcagcttgtatccggg
gcgacacgcggtgatggccgtatcggtgaggacgtcaccgcgaacgtgcgtacgatcgcg
gctataccccggaaactgactggcgacgacgtccctcgtctgcttgaagttcggggcgag
gtatttttcccggtcgctgatttcaccgacctcaacgctgccctcatcgaggcaggtaag
aacccctttgctaacccgcgcaatgcggctgccggttcgctgcggcagaaggactctcgg
gtgacggcgtcccggcctctgtcgatgatcgtccacggtattggggtgctggaaggtcac
gatttccctagccaggggcatgcctacgacaagcttgcgcagtgggggttacccgtctcg
ccgtacttcaagatcgtggagcatgtcgatgaggtacatgagttcgtgacccgctggggc
gagtcccgcgacgaggcctcccaccagattgacggcgtggtggtcaaggttgatgatgtc
tctttgcagcgcaagctgggtgccacctcgcgagctccccggtgggccatcgcatataaa
tacccgcctgaagaagtcaacaccgagctccttgatatccgcgtcaatgttggaaggacc
ggtcgtgtcaccccgtacggggtcatgagaccggtaacagttgccgggtccaccgtcgag
atggctaccctccacaacgctttcgaggtcaagcgcaaaggagtgctcattggcgacacc
gtggtgctgcgcaaggctggtgacgttattccggaaatccttggcccggtggtggagctg
cgtaacggcactgagcgggagtttcttatgcccgaccactgcccgagctgtggggcagag
ctggcctacgaaaagaacggtgacaaggatcttcgctgccctaatgctcaaggttgtccc
tcccagctacacgagcgggtcttcggattagcgtcacgtggcgccctcgacatcgaagct
cttggttgggaggccgccatcgctctgactgatccggaaaaccagcgcccgggtgatgac
gaggtcgctgaggaacttccgaaacgacaaacggcagtgctgagctccgaggctggtctg
ttcgacctgcagctcgacgatctcgccgagatcaaagtatggcgtcgtaggaaagttaac
ggcggcccaggcccctggcagcttgaaccctatttcttcacgaaggcgacagcgaaaaag
ccgtcgactccgactgccacgaccaagaaaatgttcgacgagttagcgaaggccaagtct
cagccgttgtggagagtgctggtcgccctgtctatccgtcatgtcggaccaacggcggcc
cgggctctggccacccacttcgggtcagttgaggccatccgggaagcgtccgtcgaggaa
cttgctggagtcgatggggtgggtgagattatcgccgaatcggtcaagcgatggttcgaa
gtcgactggcatcaggagattattagtcgatgggccgcagcgggagtgcggatggccgac
gatcgtgacgaggcccctgagcagaccctcgaggggttgactgtggtcgtcacgggaagt
ctggagggattcagccgtgacgaggcgaaggaggccatcgtctcgcgcggaggaaaagcg
gctggatccgtctcccgaaagactgactacgtcgtcgtgggggagaatgccggatccaag
gaaaccaaggcgcgagacctgggccgtcccatccttgacgaggccgggttccggtatttg
cttgaaaacggtccgcaggggatcacaaccatcgggtga
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