Pectobacterium actinidiae: M9782_09990
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Entry
M9782_09990 CDS
T08879
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
pacb
Pectobacterium actinidiae
Pathway
pacb01501
beta-Lactam resistance
pacb01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
pacb00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
M9782_09990
01503 Cationic antimicrobial peptide (CAMP) resistance
M9782_09990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pacb03036
]
M9782_09990
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pacb02000
]
M9782_09990
01504 Antimicrobial resistance genes [BR:
pacb01504
]
M9782_09990
Chromosome and associated proteins [BR:
pacb03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
M9782_09990
Transporters [BR:
pacb02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
M9782_09990
Antimicrobial resistance genes [BR:
pacb01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
M9782_09990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-barrel_RND
BSH_RND
RND-MFP_C
HH_MFP_RND
BSH_CzcB
YknX_C
BSH_CusB
Beta-barrel_RND_2
CzcB_C
DUF745
HH_EMRA
BSH_YknX
HH_YBHG
Biotin_lipoyl
TPR_MLP1_2
Motif
Other DBs
NCBI-ProteinID:
WEF13570
LinkDB
All DBs
Position
complement(2343466..2344587)
Genome browser
AA seq
373 aa
AA seq
DB search
MYLKIISIMAIAGLYGCDNKQPQTQSSPPIEVGVTTLNAQIYSVISELPGRTVSSTTAEV
RPQVGGIIQKRLFNEGDDVKAGQPLYQIDSASYRASFNQATASLKNVQALMLADCAKARR
YTELANTHNIARQDLDNARATCEQARASVSEKTALLESARIQLEWTTVSAPINGRIGISS
VTPGALVTAQQETALTTIRAIDIIYVDVTRSSRDLLRLRQQALSSNGESLSVSLILEDGS
VYPEKGHLQLTELAVNESTGSVILRAIFPNPQHLLLPGMYVRARINEGILENAILAPQQG
IARDVKGNASALVVTEDNSVERRQVETGNAEGDNWLVLKGLKHGDRLIIEGTDKASPGQS
VRPVEVKQPGGNS
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atgtatctgaaaatcatttccatcatggcaatcgcgggactttacggatgcgacaataag
caaccgcaaacacaaagtagtccaccaattgaagtgggagtgacaaccctcaatgctcaa
atttattctgtcatcagcgaattgcccggacgaactgtttcctccacaaccgccgaggtt
cgtccacaggtgggggggataatccaaaagcgccttttcaatgaaggtgacgatgtcaaa
gccggacagcccttgtatcaaattgattccgccagttaccgcgcatcttttaatcaggca
actgcatcccttaagaatgtgcaggcacttatgctggctgactgcgccaaagcccgtcgc
tatacagaactggcaaacacacataacatcgcccgtcaggatctagataatgcccgtgca
acctgtgagcaagcacgggctagtgtgtcagaaaaaacagcgttgctggaaagtgctcgc
attcagctggaatggaccactgtatctgcacccattaatggacggattggaatttcctct
gtaacacctggtgcactagttactgcgcaacaggaaacagcactgacaaccattcgagcg
atcgatatcatatatgttgatgttacacgttcaagccgcgacttattacgtcttcgtcaa
caagcgctatcttcgaatggagaaagccttagcgtttcactgattctggaagatggcagt
gtatatccggaaaaaggtcatctccaactaactgaacttgcagttaacgagtcaacaggt
tctgttattctgcgggctattttccctaacccgcagcatctgctgcttccgggtatgtat
gtccgtgccagaatcaatgaaggtatccttgaaaatgccatacttgcgccacagcagggt
attgcccgggatgtaaaaggtaatgcttcagcactggtcgttactgaggataatagtgtt
gaaagacggcaagtggaaacgggcaatgccgaaggtgacaactggcttgtacttaaaggg
cttaagcacggcgatcggttgattattgagggaacggataaagcgagcccaggacaaagc
gttcggcctgttgaagttaagcaaccgggaggtaactcctga
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