Arcobacter acticola: AACT_1432
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Entry
AACT_1432 CDS
T06605
Symbol
ligA
Name
(GenBank) DNA ligase, NAD-dependent
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
paco
Arcobacter acticola
Pathway
paco03030
DNA replication
paco03410
Base excision repair
paco03420
Nucleotide excision repair
paco03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
paco00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AACT_1432 (ligA)
03410 Base excision repair
AACT_1432 (ligA)
03420 Nucleotide excision repair
AACT_1432 (ligA)
03430 Mismatch repair
AACT_1432 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
paco03032
]
AACT_1432 (ligA)
03400 DNA repair and recombination proteins [BR:
paco03400
]
AACT_1432 (ligA)
Enzymes [BR:
paco01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
AACT_1432 (ligA)
DNA replication proteins [BR:
paco03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
AACT_1432 (ligA)
DNA repair and recombination proteins [BR:
paco03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
AACT_1432 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AACT_1432 (ligA)
MMR (mismatch excision repair)
DNA ligase
AACT_1432 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
AACT_1432 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
BRCT
PTCB-BRCT
HHH_2
DNA_ligase_ZBD
Nlig-Ia
HHH_5
HHH
zf-C4pol
Motif
Other DBs
NCBI-ProteinID:
QKE28597
UniProt:
A0A6M8EVS3
LinkDB
All DBs
Position
complement(1421480..1423426)
Genome browser
AA seq
648 aa
AA seq
DB search
MTKNEYDLKIEKLISWAQEYYVFDNPLASDEEYDLLARECLAFEQENPTLSHPNSPNKRV
GGFILDGFEKASHLSRMWSQEDVFNTQELEDWIKRAQKVNTDLEFYCEPKFDGASLNLIY
ENGLLKQAITRGDGSIGEDVTNNVKTIHSIPLQIKEKSLIELRGEIVIKKKDFEKINQDR
LANNEQLFANPRNAAAGSLRQLDPSITAKRKLFFNIWGIGQNSLDFKTLSEKMNYIYSLG
FARPPLITVTKDVAGIEKLYHEIIASRNDIEMMLDGMVIKVNDIETQDELGYTVKFPRWS
CAYKFPAVEKTTIVKDIIIQVGRTGVLTPVALVEPTLIDGSTVSRATLHNFDEIERLDLR
LNDEVIIIKSGDIIPKITKVFTERRKGDETIISRPTSCPECQSEVLDEGTMIKCQNLDCP
ARVVNSIIYFASKNCMNIDGLGNKIVETLVVEKKIYDILDLYSLKYEDLENLEGFKEKKI
NNLINAIENTKGSSLHRIINALGIEHIGEVASKQICLEFGLDVVNIGYDSLIALDGIGEQ
MAKSFCEFMRVNKELVEKLIAIIAPTVEVKVEVEENNFKGKTIVLTGTMSVSRGDIKKQL
ELLGAKISSSVSKKTDYVIYGEDAGSKYDKAIELKVTVLTEDEMNSMI
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgactaaaaatgaatatgatttaaaaatagaaaaactaatctcttgggcccaagaatac
tatgtatttgacaatccccttgcaagtgatgaagagtatgatttacttgctagagaatgc
ctcgcttttgaacaagaaaaccctactttatcccatccaaactcgccaaataaaagagtt
ggtggatttatacttgatggttttgaaaaagcatctcacttaagtagaatgtggtctcaa
gaagatgtttttaatacgcaagaattagaagactggataaaaagagcacaaaaagtaaat
actgatttagagttttactgtgagccaaaatttgatggagcttctttaaatcttatttat
gaaaatggtttattaaaacaagcaataacaaggggtgatggaagtattggtgaagatgtt
acaaacaatgttaaaacaattcactctattccacttcaaataaaagagaagtctttaatt
gaacttcgaggtgaaattgttattaagaaaaaagattttgaaaaaataaatcaagataga
ttagcaaataacgaacaacttttcgcaaaccctagaaacgcagcagcaggaagtttaaga
caactagatccaagtattacagctaagcgaaaactattttttaatatttggggaattggt
caaaattcacttgattttaaaactctgagcgagaaaatgaattatatatattcattagga
ttcgctcgacctcctttaataacagttacaaaagatgttgcgggaatcgaaaaactttac
catgaaataattgcttcaagaaacgatattgaaatgatgcttgatggaatggttataaaa
gtaaatgacattgaaacacaagatgagttaggatatacagtaaaatttccaagatggtct
tgtgcttataaattcccagcagttgagaaaacaactattgtaaaagatattattatacaa
gtaggaagaacaggagttttaactcctgttgctttagttgagcccactttaatagatgga
agtacagtaagtcgagcaacacttcataactttgatgaaattgaaagattagatttaaga
ctaaatgatgaagttattattataaaaagtggagatattattccaaaaatcactaaggta
tttacagaacgaaggaaaggagatgaaacaattatttctcgacctacttcatgtcctgaa
tgccaaagtgaagttttagatgaaggcacaatgataaaatgccaaaacctagattgccca
gcaagagtagtaaactctattatttattttgcaagtaaaaactgtatgaatatagatggt
cttggaaataaaatcgtagaaacgctagtagttgagaaaaagatttatgatattttagat
ttatattctttaaaatatgaagacctagaaaacctagagggttttaaagaaaaaaaaata
aataatcttataaatgcaattgaaaatacaaaaggctcgtctttacatagaatcataaat
gcacttggaatagaacacataggagaagttgcatcaaaacaaatctgcttagaatttgga
cttgatgttgtaaatataggttatgattcactaatagcccttgatggaattggtgagcaa
atggcaaaatcattttgcgaatttatgagagtaaataaagaattagttgaaaaattaatt
gcaattatagctccaacagttgaagtaaaagtagaagtagaagaaaataacttcaaaggt
aaaaccatagttctaacaggaacaatgagcgtaagtcgtggagatatcaaaaaacaacta
gaacttcttggagcaaaaatcagctcttcagtatctaaaaaaacagattatgtaatctat
ggtgaagatgctggaagcaaatatgataaagccatagaattaaaagttactgttttaaca
gaagatgaaatgaactctatgatttaa
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