Pontibacter actiniarum: CA264_04510
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Entry
CA264_04510 CDS
T05632
Name
(GenBank) DNA ligase (NAD(+)) LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
pact
Pontibacter actiniarum
Pathway
pact03030
DNA replication
pact03410
Base excision repair
pact03420
Nucleotide excision repair
pact03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pact00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CA264_04510
03410 Base excision repair
CA264_04510
03420 Nucleotide excision repair
CA264_04510
03430 Mismatch repair
CA264_04510
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pact03032
]
CA264_04510
03400 DNA repair and recombination proteins [BR:
pact03400
]
CA264_04510
Enzymes [BR:
pact01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
CA264_04510
DNA replication proteins [BR:
pact03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
CA264_04510
DNA repair and recombination proteins [BR:
pact03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
CA264_04510
NER (nucleotide excision repair)
GGR (global genome repair) factors
CA264_04510
MMR (mismatch excision repair)
DNA ligase
CA264_04510
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
CA264_04510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
HHH_5
DNA_ligase_ZBD
PTCB-BRCT
HHH
BRCT_2
Nlig-Ia
5_3_exonuc
RNA_pol_A_CTD
Auto_anti-p27
ABC_tran_CTD
Motif
Other DBs
NCBI-ProteinID:
ARS34761
UniProt:
A0A1X9YPK7
LinkDB
All DBs
Position
complement(1040877..1042886)
Genome browser
AA seq
669 aa
AA seq
DB search
MATAKDPALEIQELTQQINHLNYQYYQNSVSEVSDYDFDQLLKRLEALEAQYPELRLPHS
PTQRVGGTVTKNFDTVYHKWPMLSLSNTYSEEELREFDKRVRKVVGDEVEYVCEQKFDGV
AISLTYENGKFVQGATRGDGTRGDNITANVRTIHDVPLQAHGEGFPELFEVRGEVFMPFQ
VFEQLNVEREEAGEQLLANPRNATSGTLKQQDSAVVASRKLGCFSYSFHTDKTLFDTHSE
SLQAIQKWGFKVSETWRKCGSIDDVMAYINEWETRRHELPIATDGVVVKVNSYALQEELG
FTSKSPRWAIAYKYAAENSATKLIDIQYQVGRTGAVTPVALLEPVALAGTTVKRASVHNA
NEIQRLDLRLGDTVFVEKGGEIIPKITGVDLDKRPADSQPILYPTHCPACETELVRSEGE
ANFYCPNDKGCPPQIKAKLEHFISRKAMNIDGLGPETIEQLYATGLVTNAADLYDLTFEQ
LVQLERMGEKSANNILKSLEKSKEAPYDRVLFALGIRFVGSTVAKKLAQDLPDLEALRGA
TFEELVAINEIGERIARSILAYFQDPDHVQLVERLKAAGLNFKSENKAPEIQSNKLEGQT
FVISGVFESVSRDELQQLIVSHGGKVVSSISKKLSYLVAGDKMGPSKLEKAETLGIKILS
EAEFLSMIG
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atggcaacagcgaaagacccggctctggagatacaggagctgacgcaacagataaaccac
ctgaattaccaatattaccagaacagcgtttcagaagtgtcggactatgactttgaccaa
ctgctgaagcggctggaggcactggaggcccaatacccggagctgcgcctgccgcactcc
cctacccagcgcgtgggtggcaccgttaccaaaaactttgacacggtttaccacaagtgg
cccatgctctcgctcagcaacacctattcagaggaggaactgcgggagtttgacaagcgc
gtgcgaaaagtagtgggcgatgaagtggagtatgtgtgcgagcagaaatttgacggggta
gcgatcagcctgacctacgagaacggtaagtttgtacaaggcgccacccgtggcgacggc
acccgcggcgataacatcacggccaacgtacgcaccatccacgatgtgccgcttcaggcg
catggcgagggctttccagagcttttcgaagtgcgcggcgaggtgtttatgcctttccag
gtgtttgagcaactgaacgtggagcgggaagaagccggggagcaactgctggcaaaccca
cgcaacgccacctccggcacgcttaaacagcaggactctgcggtagtagccagccgcaaa
ctaggatgcttctcctatagcttccacacggataaaaccttgttcgacacacattccgag
agccttcaggccatacagaaatggggtttcaaagtttccgaaacgtggcgcaagtgcggc
agcatagacgatgtaatggcctacatcaacgagtgggaaaccagacgccatgagcttccc
attgccacagacggtgtggtggtaaaggtaaacagctatgccttgcaggaagagcttggc
tttacctctaaaagtccgcggtgggcgattgcctataagtatgcggcagaaaactccgcc
acgaaactgattgatatccagtaccaggtaggcagaaccggagccgtaacgccagtagcc
ttgctggagccggtagctttggcaggcacaaccgtaaagcgtgcctctgtgcacaacgcc
aacgaaatccagcgcctggacctgcgcctgggcgatacggtgtttgtagaaaagggcggc
gagatcatccctaaaataacaggggttgaccttgacaaacgccctgccgacagccaaccg
atcctctaccctacccactgccctgcctgcgaaaccgagctggtgcgctccgaaggcgaa
gccaacttctactgcccgaacgacaaagggtgcccgccgcagatcaaagccaagctggag
catttcatctcccgcaaagccatgaacattgatggcctgggccctgaaaccattgagcag
ctgtatgcaaccggtttggttaccaacgccgccgacctctacgacctcacgtttgagcag
ctggtacagctggagcgtatgggagagaaatctgctaacaacattctcaagagcctggag
aaatcgaaggaagcgccctatgaccgcgtgttgttcgccctgggcatccgctttgtgggc
agcaccgtggctaaaaaacttgctcaggatttgccggatttggaggctttacgaggagct
acttttgaagagctggttgccatcaacgagattggagagcgaattgcccgctctatactt
gcttacttccaggacccggaccatgtgcagctagtggaacggctaaaagccgccgggctt
aactttaagtccgaaaacaaagccccggaaatccagagcaacaaactggaaggccagaca
ttcgttatttccggtgtgtttgagagcgtgagccgtgatgagttgcagcagctgatcgtc
agccacgggggcaaagtggtaagctcaatttcaaagaagctctcctacttagtggccggc
gataaaatgggcccttccaagctggagaaagccgaaacgctgggtattaaaattctttcg
gaggccgagttcctgtcaatgattgggtag
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