Candidatus Pseudomonas adelgestsugas: C3B55_00623
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Entry
C3B55_00623 CDS
T05857
Symbol
gdhB
Name
(GenBank) NAD-specific glutamate dehydrogenase
KO
K15371
glutamate dehydrogenase [EC:
1.4.1.2
]
Organism
pade
Candidatus Pseudomonas adelgestsugas
Pathway
pade00220
Arginine biosynthesis
pade00250
Alanine, aspartate and glutamate metabolism
pade00910
Nitrogen metabolism
pade01100
Metabolic pathways
pade01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
pade00001
]
09100 Metabolism
09102 Energy metabolism
00910 Nitrogen metabolism
C3B55_00623 (gdhB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
C3B55_00623 (gdhB)
00220 Arginine biosynthesis
C3B55_00623 (gdhB)
09106 Metabolism of other amino acids
00430 Taurine and hypotaurine metabolism
C3B55_00623 (gdhB)
Enzymes [BR:
pade01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.1 With NAD+ or NADP+ as acceptor
1.4.1.2 glutamate dehydrogenase
C3B55_00623 (gdhB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_GDH_CD
GDH_C
GDH_ACT1
GDH_ACT2
GDH_HM3
GDH_ACT3
GDH_HM1
GDH_HM2
ELFV_dehydrog
DUF1654
Motif
Other DBs
NCBI-ProteinID:
QAX81952
LinkDB
All DBs
Position
complement(1056729..1061597)
Genome browser
AA seq
1622 aa
AA seq
DB search
MAFFTAASKFDFQYQLQASLAQHVSEPVLPQLALFAEQFFGIISLDELTQRRLSDLVGCT
LSAWRLFERFNHMQPQVRVYNPDYERHGWQSTHTAVEVLHCDLPFLVDSVRTELNRRSYS
IHTLQTTVFNVRRGKKGELLEILPKSTDGKDIQQESLIYLEIDRCANIAELNLLSKELEQ
VLGEVRVVVADFEPMKVKVQELLSNIDASQFSIDVEEKSEIKNFLAWLVDNHFTFLGYEE
FIVRDDKDSGYIKYDVHSFLGLTKLLRPGLAAEDLQIEGYAVAYLSEPTVLSFAKAAYPS
RVHRPAYPDYVSIRHIDAYGKVIKECRFIGLYTSSVYGESVRMIPYIRRKVAEIERLSGF
QAKAHLGKELAQVVEVLPRDDLFQTPVGELFNTVMSIVQIQERNKIRVFLRKDPYGRFCY
CLVYVPRDIYSTEVRQKIQQVLMDRLKALDCEFWTFFSESVLARVQLILRVDPKNHLYID
QVQIEREVVQACRSWQDDYASLVVESFGEALGTKVLADFPKGFPAGYRERFAAYSAVVDM
HHLNSLTEANPLVMSFYQPLGQVSGQRELHCKLYHADTPLALSDVLPILENLGLRVLGEF
PYRLRHTNSREFWIHDFAFIAAEGVNLDIQQLNDTLQDAFVHIVHGDTENDAFNRLVLTA
GLPWRDVALLRAYARYLKQIRLGFDLGYIASTLNNHIEIARELTRLFKMRFYLARKLTAN
DLENKQQRLEQAILAALDDVQVLNEDRILRRYLDLIKATLRTNFYQADANGQNKSYFSFK
FDPRVIHELPKPVPKFEIFVYSPCVEGVHLRFGNVARGGLRWSDREEDFRTEVLGLVKAQ
QVKNSVIVPVGAKGGFLSRRLPLGGTRDEIAAEGIACYRLFISGLLDITDNLKDGILVPP
VNVVRHDDDDPYLVVAADKGTATFSDIANSIAIDYGFWLGDAFASGGSAGYDHKKMGITA
KGTWVGVQRHFRERSINVQKDSITVVGIGDMAGDVFGNGLLMSDKLQLVAAFNHLHIFID
PNPNPASSFVERQRMFELPRSAWTDYNTSIISEGGGIFSRSAKSIAISPQMKERFDILDD
KLTPTELLNALLRAPVDLLWNGGIGTYVKASTESHADVGDKANDALRVNGNELRCKVVGE
GGNLGMTQLGRVEFGLNGGSSNTDFIDNAGGVDCSDHEVNIKILLNEVVQAGDMTDKQRN
KLLASMTDEVGNLVLRNNYKQTQALSLATRKAYERAAEYKRLISDLEGRGKLDRAIEYLP
TDEQLTERASIGKGLTRPELSVLISYSKIDLKESLLQSLVPDDDYLTRDMETAFPPSLVI
NFGEAMRCHRLKREIVSTQIANDLVNHMGITFVQRLKESTGMSQANVVGAYVIVRDIFHL
PHWFRQIEALDYQASADLQLELMDELMHLGRRATRWFLRSRRNEQDAGRDTAHFGSHLAT
LGLKLDELLEGPTRESWQARYRAYIEAGMPELLARMVAGTTHLYTLLPIIEAADVTGHDV
ADVAKAYFAVGSALDLPWYLQQISDLPVVNNWQAKAREAFCDDVDWQQRAITISILQMIN
APQDMEACVALWLKQHQDMADRWRAMMVEIRAAVGTDYAMYAVANRELLDLALSGQSVLQ
SA
NT seq
4869 nt
NT seq
+upstream
nt +downstream
nt
atggcgttcttcaccgcagccagcaagttcgacttccagtatcaactgcaagcgtcgctg
gctcagcatgttagtgaaccggtactgccacaattggcgctgttcgctgaacaattcttc
ggtattatttctctggacgaactaacccagcgacgcctttccgatcttgtcggttgcacc
ctatctgcctggcgcctgtttgaacgctttaatcacatgcaaccgcaagtgcgtgtttac
aacccagattatgagcgtcatgggtggcagtcgacacacactgctgttgaagtgctgcat
tgtgatttacctttcttggtagactcagtccgtactgagctgaaccgccgtagctatagt
atccataccctgcaaaccactgtatttaacgtgcggcgaggaaaaaaaggtgagttacta
gaaattttgccaaaaagcaccgatggtaaagatatccagcaagaatcgctaatatatctg
gagattgaccgttgcgctaatattgctgaattgaatttactgagcaaagagcttgagcag
gtgctaggagaggtgcgcgtagttgtagccgattttgaacctatgaaagttaaggttcag
gaactgctatcaaatatagatgccagtcaattcagtatcgacgttgaagaaaaatctgag
ataaagaatttcttggcatggctggtagataaccatttcacttttcttggttatgaagag
tttatagtacgtgacgataaagatagtggctatattaaatatgacgttcattccttcctc
ggtctaactaagctgcttcgtcccggcctcgctgctgaagaccttcaaattgaaggctat
gccgtagcctatctaagcgagccgactgtgctgtcgtttgccaaggctgcatacccaagt
cgtgttcaccgtccagcttaccctgattatgtgtcgatccgccacatcgatgcttatggc
aaagtaattaaggagtgtcgcttcataggtctgtacacctcttcggtgtatggtgaaagt
gtgcgtatgattccttatatccgccgcaaagttgcggaaattgaacgcttgtctggcttt
caggctaaagctcacttaggcaaagagcttgcccaagtggttgaagtgttgccgcgtgat
gatttgttccagactccggtgggcgaactgttcaatacggttatgtctattgtacaaatc
caggagcgcaacaaaattcgcgtatttctgcgcaaagatccgtacggtcgtttctgttat
tgtttagtctatgtgccgcgtgacatctattctactgaagtgcgtcagaaaatccaacaa
gtattaatggatcgcctgaaagctttagactgtgagttctggacctttttttccgaatct
gtgctggcccgcgtacagttaattttacgggtagacccgaaaaatcatttatatatcgac
caagttcaaatcgaacgagaagtagtgcaagcttgtcgcagctggcaagatgactacgca
agcctagtagttgaaagttttggtgaggctcttggcacaaaagtactggctgatttccca
aaaggttttccggcaggttaccgcgagcgttttgctgcgtattcagcagtagtagacatg
catcaccttaacagcctaactgaagctaatccattagtcatgagcttctatcagccgcta
ggtcaggtttccggtcaacgtgagctgcattgtaagctctatcatgcggataccccatta
gcgttgtctgatgtgttgccgatcctagaaaatcttggcttgcgcgtgttaggtgaattt
ccgtaccgcttacgccacaccaatagtcgcgagttctggattcatgattttgcgtttatc
gctgccgaaggcgtgaatctagatatccagcagcttaacgacaccctgcaagatgcattt
gtacatattgttcacggcgacactgaaaacgatgcatttaaccgtttggtacttaccgct
ggtttaccttggcgtgatgtagcattgctacgagcctatgctcgctacctaaagcagatc
cgtttaggttttgaccttggttatatcgccagcactctaaacaaccatatcgaaatcgct
cgtgagttgactaggttgttcaagatgcgtttctatctggcgcgtaagctcactgctaat
gacctagaaaataagcagcaacgactagagcaagcgattttagctgcattagatgatgtt
caggtgctaaatgaagaccgcatattacgtcgctacttggacttgattaaagcaactctg
cgtaccaacttctatcaggctgacgctaatggccaaaataagtcatatttcagcttcaag
tttgacccgcgtgtaattcatgaattaccaaaacctgtaccgaagtttgagatttttgta
tactcgccgtgtgttgagggtgtgcacttacgatttggtaacgtagcgcgtggtggtctg
cgctggtctgaccgcgaagaggattttcgtactgaagtgctcggtctagtaaaagctcaa
caagttaaaaattctgtaattgtaccggttggcgctaaaggcggctttttgtcgcgccgt
ctgccattaggtggcacccgtgacgagattgcagctgagggcattgcttgctaccgcctc
tttatttctggtctattagatatcaccgacaacctcaaagacggcattttagtgccaccg
gttaatgtagttcgccatgatgatgatgacccatacttggtagtggcagcggataagggc
accgcgaccttttctgacatcgccaatagcatcgctattgattatggtttttggcttggc
gatgcgtttgcttccggtggttcggccggttatgaccacaagaagatgggcatcaccgct
aagggtacgtgggttggcgtgcagcgtcacttccgtgagcgtagtattaatgtccaaaaa
gacagcataactgtggtaggcataggtgatatggctggtgatgtttttggtaacggcctg
cttatgtctgataagctgcaattagttgcggcttttaatcacctgcatatctttattgac
cctaacccgaacccagcaagtagcttcgttgaacgtcagcgtatgtttgagctgccgcgt
tcagcatggactgactataacactagtattatatccgaaggtggtggtatcttttcacgc
agcgcaaagagcattgctatttcgccgcaaatgaaagaacgctttgatattctagatgat
aagctaaccccaactgaattgctaaatgctttgctcagggcaccggtagacttgttatgg
aatggcggtatcggtacttatgtcaaagctagcaccgagagtcatgctgatgtaggcgac
aaagctaacgatgctttgcgcgtcaatggtaatgagttgcgctgtaaagtagtaggcgag
ggcggtaacttaggcatgacccaattaggtcgcgttgaatttggtctaaatggaggtagc
tctaataccgactttattgataatgctggcggtgtggactgctcagatcatgaagtaaac
atcaagattttgctcaatgaagtggtacaagccggtgacatgactgacaagcagcgtaat
aaactgctagcgagcatgactgatgaagttggtaacttagtattaaggaacaactataaa
cagacccaggctttatctctggctacccgtaaagcttatgagcgcgccgcagagtataag
cgtttgataagcgacctagagggtcgtggtaagctagaccgcgctatcgagtacctacca
accgatgagcagcttactgagcgtgcttctatcggtaaaggtttaacccgtccagagctg
tcggtcctgatatcttacagtaagatagaccttaaggaatctttactccagtcgttggta
cctgatgacgactatctgactcgtgatatggaaactgcattcccaccgagcttggttatt
aatttcggtgaagccatgcgttgtcatcgtctgaagcgcgaaattgtcagcactcagatc
gctaatgatttagtgaaccatatgggtattacttttgttcaacgacttaaagagtctact
ggtatgagccaggcgaatgtagtcggcgcttatgtaatcgtacgtgatattttccacctc
ccacactggtttcgtcagatcgaggctctcgactaccaagccagtgctgacttgcaactg
gaattaatggatgagcttatgcatctaggccgccgcgctacacgttggttcctgcgtagc
cgtcgcaatgagcaggatgccgggcgtgatactgcgcactttggttcacacttggcgaca
ttaggtctgaaacttgatgagctgttagaaggtccaactcgcgaaagctggcaggctcgt
taccgagcttatatcgaagctggtatgccagagttattggcacgcatggttgcaggtact
actcatctgtacaccttgttaccaatcattgaggccgctgatgtaaccgggcatgacgtt
gccgatgtggccaaggcctactttgccgttggcagtgccttggacttaccttggtacttg
cagcagatcagcgatctgccagtggtcaataactggcaagctaaagcccgtgaagcattc
tgcgatgacgtagactggcagcaacgggcaattactatttcgatactgcaaatgatcaat
gcgccacaagacatggaggcttgtgtggctctatggcttaagcaacatcaagacatggct
gatcgatggcgtgcaatgatggtagaaattcgtgctgctgttggcactgactatgctatg
tatgctgttgcaaaccgtgagttgttggatttagcattgagtggtcagtcggtgttgcag
tcggcctga
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integrated database retrieval system
