Pygoscelis adeliae (Adelie penguin): 103914528
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Entry
103914528 CDS
T06012
Symbol
KDM2B
Name
(RefSeq) lysine-specific demethylase 2B
KO
K10276
F-box and leucine-rich repeat protein 10/11 [EC:
1.14.11.27
]
Organism
padl
Pygoscelis adeliae (Adelie penguin)
Pathway
padl03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
padl00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
103914528 (KDM2B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
padl03000
]
103914528 (KDM2B)
04121 Ubiquitin system [BR:
padl04121
]
103914528 (KDM2B)
03036 Chromosome and associated proteins [BR:
padl03036
]
103914528 (KDM2B)
Enzymes [BR:
padl01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.27 [histone H3]-dimethyl-L-lysine36 demethylase
103914528 (KDM2B)
Transcription factors [BR:
padl03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
103914528 (KDM2B)
Ubiquitin system [BR:
padl04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
103914528 (KDM2B)
Chromosome and associated proteins [BR:
padl03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
103914528 (KDM2B)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
103914528 (KDM2B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PHD_4
zf-CXXC
F-box-like
JHD
F-box
Cupin_8
JmjC
LRR_4
Motif
Other DBs
NCBI-GeneID:
103914528
NCBI-ProteinID:
XP_009319462
LinkDB
All DBs
Position
Unknown
AA seq
1176 aa
AA seq
DB search
MPDPDFTVRDVKLLVGSRRIVDVMDVNTQKGVEMSMSQFVRYYETPEAQREKLYNVISLE
FSHTKLENIVKRPNVVDLVDWVDNMWPQHLKERQTDATNAISEMKYPKVKKYCLMSVKGC
FTDFHIDFGGTSVWYHVFRGGKIFWLIPPTLQNLELYEEWVLSGKQSDIFLGDRVERCQR
IELKQGYTFFIPSGWIHAVYTPVDSLVFGGNILHSFNVPMQLRIYEIEDRTRVHAKFRYP
FYYEMCWYVLERYVSCVTQRCHLSKEYQKESMLIDAKRKRSTDSYSSDSWLDMDEESCDA
HIREEKDDSLDKNSKSLVDGSSSPNSTHSEGKEGAGRKQKATVMRYLKRTLSNESDDSIK
STTPTDYPKTPTGSPATEVSTKWTHLTEFELKGLKALVEKLESLPENKKCVPEGIEDPQA
LLEDMKNILKEHADDDQNLAISGVPVVSWPKKTTKNRAVGRPKGKLGTASAVKLAANRTT
AGARRRRTRCRKCEACLRTECGECHFCKDMKKFGGPGRMKQSCIMRQCIAPVLPHTAVCL
VCGEAGKEDTVEEEESKFNLMLMECSICNEIIHPGCLKVKESDGVVNDELPNCWECPKCN
HAGKTGKAYKQKRGPGFKYASNLPGSLLKEQKMNRDNKEVIDAAKRKGDCEETPRRKSEE
HSKKTQVDSILRRKSDEVHLWRKRKFEKPQEPTMRKRLKLGKEEKLFRKKRRSWKAPDDR
TAMIKPLRRLKQEPEDDLPEAPPRSKDSDQSRSSSPTAGPSTEGTEPRDKKKFKMRRKRR
LPNKELSKELSKELNQEIQKTENSLANENHQPIKSEPESENEEPKRALNNSERLHRFSKG
LNGTPRELRHQLIPSLRSTPRGITRPPPSLSPPKCIQMERHVIRPPPISPPPDSLPLDDG
AAHVMQREVWMAVFSYLSHRDLCICMRVCKTWNRWCCDKRLWTKIDLNHCKSITPLMLSG
IIRRQPVTLDLSWTNISKKQLSWLINRLPGLRDLLLSGCSWIAVSALCSSSCPLLRTLDV
QWAEGLKDAQMRDLLSPPTDNRPGQIDNRSKLRNIVELRLAGLDITDASLRLIIRHMPLL
SKLNLSYCNHVTDQSINLLTAVGTTTRDSLTEINLSDCNKVTDQCLSYFKRCGNICQIDL
RYCKQVTKEGCEQFIAEMSVSVQFGQVEEKLLQKLS
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
atgcctgacccggatttcaccgtcagagatgtgaagctattagtgggaagccgacggata
gtggatgtgatggatgtgaacacgcagaaaggtgttgaaatgagcatgtctcaatttgtg
agatactatgaaacgccggaggcccagcgtgaaaagctctacaatgtcatcagcctggag
ttcagtcacacgaagctggagaacattgtcaagcgccccaatgtggtggacttagtcgac
tgggtggataatatgtggccacagcatttgaaggagagacagacggatgctaccaatgct
atttcagagatgaaataccccaaagtgaaaaagtactgtttgatgagtgtgaaaggatgc
ttcactgattttcatatcgattttggtggcacttcagtgtggtatcacgttttccgtggg
gggaagatcttctggctgattccacctactctgcagaacctagaactttatgaagaatgg
gttctttcaggaaagcaaagtgatatctttctgggagacagggtggaacgatgccaaaga
attgagctgaaacaaggctatacgttcttcattccttcagggtggatacacgcagtttat
actccagtagattctctggtgttcggtggaaatatcctgcatagctttaatgttcccatg
cagcttcgcatctatgaaattgaggacagaacaagggtgcatgccaaattccgttatcct
ttctactatgaaatgtgctggtatgttctggagagatacgtgtcctgtgtgacccagcgc
tgccacctcagcaaagagtaccagaaagaatcaatgttaattgatgcaaaaagaaaacgc
agcacagacagctattcatcagattcgtggttagacatggatgaagaatcttgtgatgcc
catatccgggaggagaaggatgacagcttggataagaactccaaatccttggtggatggc
tcctcctcacccaacagcacacactcagaagggaaggagggtgcaggaagaaaacaaaaa
gccacagtaatgagatacctaaaaagaactttgtctaatgagtcagatgacagcataaaa
tcaacgacccccacggactatcccaaaacaccaacggggtctccagctacagaagtttca
accaaatggactcacctcacagaatttgaactgaagggtttaaaagccctggtggaaaag
cttgaatctctcccagagaacaagaagtgtgttccagaaggtatcgaagatccgcaggct
ctcctagaggacatgaagaacatactgaaggaacatgctgatgatgaccaaaatcttgcc
atttcgggtgtccctgtggtcagctggcccaagaagaccacaaagaacagggcagttgga
cggcccaaagggaaactgggcactgcttctgcagtaaagcttgcagctaatcggacaact
gctggagcacgtcggaggaggacgcgatgccgcaagtgcgaggcgtgtctgcggacagag
tgcggcgagtgtcacttctgcaaagacatgaagaaatttgggggacctggcaggatgaaa
cagtcctgcattatgaggcagtgtatcgcaccggtgttgcctcatactgccgtgtgtttg
gtgtgcggagaagctgggaaagaggacactgtggaagaggaggagagcaagtttaatctc
atgctaatggaatgctccatttgtaatgaaatcatacacccaggatgccttaaggtgaag
gaatcggatggtgtggttaacgatgagctgccgaactgctgggagtgtccaaagtgcaac
cacgcagggaaaactggaaaagcgtacaagcaaaagcgcggaccaggattcaaatacgca
tcaaatctcccaggctcattgctgaaggaacagaaaatgaacagagacaataaggaagta
atagatgctgcaaaacggaaaggggattgtgaagaaactcccaggcggaaatcggaggaa
cattccaaaaagactcaagttgactcaatactgaggagaaagtcagatgaagtgcatctg
tggaggaaaaggaaatttgagaagccccaggaacccactatgagaaagcggctaaaactt
ggaaaagaagagaaactcttcaggaagaagcggcgatcgtggaaggctccagatgaccga
actgctatgatcaaacccctgcggcgcctcaagcaggagccagaggatgacctgccagaa
gcacctcccaggtccaaggatagtgaccagtcgcggtccagctctcccactgcaggtccc
agcacggagggcaccgagccccgggacaagaagaagttcaagatgaggaggaaaaggcgg
cttcctaataaggaactgagcaaggagctcagtaaggagctcaaccaggagatccaaaaa
accgagaacagccttgccaatgagaatcaccaacccatcaaatctgaacctgagagcgag
aacgaggaacctaagcgtgctttgaacaacagcgagagactccataggttcagcaaaggg
ttaaatgggactccccgggagctgaggcaccagctcatccccagcctgcgaagcacacct
cggggaataacccggccaccaccttcgctctctcctcccaaatgcattcagatggaacgg
cacgttatccggccacctcccatcagcccccctccggactcgctccccctggatgacggg
gcagcccacgtgatgcagagggaagtctggatggctgtctttagctacctcagtcataga
gacttgtgcatctgtatgagagtttgcaagacctggaacagatggtgctgtgacaaaaga
ttatggaccaaaatagatttaaaccattgtaaatccatcactccacttatgcttagtggc
attattaggagacagcctgtaacccttgatcttagctggacaaatatatctaaaaagcag
ctgagttggcttatcaacagactgccaggtcttcgagacctgctgttatcagggtgctca
tggatagcagtgtcggcactttgtagttccagttgtcctttgctccgaactctggatgtg
cagtgggcagaaggcctgaaagacgcacaaatgagagacctcttgtcgccacccacagat
aaccggccaggtcagatcgacaaccggagtaaactgcggaacatagttgagctgcgtttg
gctggcctggatattacagatgcttctttgcggctgatcataaggcacatgcctctgctc
tccaaactcaatcttagttactgtaatcacgtgacagatcagtctattaacctgctgacc
gcagttggaaccaccacgcgggattcattaacagaaattaatttatcagactgcaataag
gttactgaccagtgcctgtcttacttcaaacgttgcggaaacatctgccagatcgacttg
aggtactgcaagcaagtgacaaaagaaggctgcgagcagttcatagcggaaatgtcagta
agtgttcagtttgggcaagtggaagaaaaacttctgcaaaaactgagttag
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integrated database retrieval system
