Pygoscelis adeliae (Adelie penguin): 103920637
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Entry
103920637 CDS
T06012
Symbol
EFTUD2
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
padl
Pygoscelis adeliae (Adelie penguin)
Pathway
padl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
padl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103920637 (EFTUD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
padl03041
]
103920637 (EFTUD2)
Spliceosome [BR:
padl03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
103920637 (EFTUD2)
Complex C
U5 SnRNP specific factors
103920637 (EFTUD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
EF-G_D2
Septin
FANCL_d3
Motif
Other DBs
NCBI-GeneID:
103920637
NCBI-ProteinID:
XP_009326676
LinkDB
All DBs
Position
Unknown
AA seq
943 aa
AA seq
DB search
MLVVPWLEDDDDDDDMGDHDEDHPGMEVVLHEDKKYYPTAEEVYGPEVETIVQEEDTQPL
TEPIIKPVKTKKFSLMEQTLPVTVYEMDFLADLMDNSELIRNVTLCGHLHHGKTCFVDCL
IEQTHPEIRKRYDQDLCYTDILFTEQERGVGIKSTPVTIVLPDTKGKSFLFNIIDTPGHV
NFSDEVTAGLRISDGVVLFIDAAEGVMLNTERLIKHAVQERLAVTVCINKIDRLILELKL
PPTDAYYKLRHIVDEVNGLISMYSTDENLVLSPLLGNVCFSSSQYSICFTLGSFAKIYAD
TYGDINYQEFAKRLWGDIYFNPKTRKFTKKAPTSSSQRSFVEFILEPLYKILAQVVGDVD
TTLPRTLDELGIHLTKEELKLNIRPLLRLVCKKFFGEFTGFVDMCVQHIPSPKVGAKTKI
EHTYTGGVDSDLGEAMSECDPDGPLMCHTTKMYSTDDGVQFHAFGRVLSGTIHAGQPVKV
LGENYTLEDEEDSQICTVGRLWISVARYHIEVNRVPAGNWVLIEGVDQPIVKTATVTEPR
GNEEAQIFRPLKFNTTSVIKIAVEPVNPSELPKMLDGLRKVNKSYPSLTTKVEESGEHVI
LGTGELYLDCVMHDLRKMYSEIDIKVADPVVTFCETVVETSSLKCFAETPNKKNKITMIA
EPLEKGLAEDIENEVVQITWNRKKLGEFFQTKYDWDLLAARSIWAFGPDATGPNILVDDT
LPSEVDKSLLGSVKDSIVQGFQWGTREGPLCDELIRNVKFKILDAVIAQEPLHRGGGQII
PTARRVVYSAFLMATPRLMEPYYFVEVQAPADCVSAVYTVLARRRGHVTQDAPIPGSPLY
TIKAFIPAIDSFGFETDLRTHTQGQAFSLSVFHHWQIVPGDPLDKSIVIRPLEPQPAPHL
AREFMIKTRRRKGLSEDVSISKFFDDPMLLELAKQDVVLNYPM
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atgttggtggttccctggctcgaggatgatgacgatgatgacgatatgggggaccatgac
gaggaccaccctgggatggaggtggtgctgcatgaggataagaaatactatcccaccgcc
gaggaggtctacgggcccgaagtagagacgatagtacaagaggaagacacgcagcctctc
actgagcctattattaaacctgtgaaaaccaaaaaattctctctgatggaacagacgtta
ccggtcactgtctatgagatggatttcctggcagatctgatggacaactcggagctaatt
cgaaatgtgactctgtgtgggcaccttcaccacggcaagacgtgttttgtcgactgcctg
atagaacagacacatccagaaatccggaagcgctatgaccaggacctttgctacactgat
atattgttcacagagcaagagaggggagtagggatcaagagcacaccagtgactattgtt
ctgccggacaccaaaggaaagtcttttctcttcaacatcatcgacactccaggtcacgtc
aatttttctgacgaggtgacagctggccttcgtatttcggatggcgttgtacttttcatt
gatgcggctgagggggtgatgctgaacacagagaggctgatcaagcacgcggtgcaggaa
aggctcgcagtgactgtgtgcatcaacaagatagaccgactgatcctggagctgaaattg
ccccctacagatgcttattacaagctccgacatattgtagatgaagttaatggtctgatc
agcatgtattccaccgatgagaaccttgttctgtctccccttctggggaatgtgtgtttc
tccagttcacagtacagcatctgcttcacgctgggatcttttgcaaagatttatgcagac
acatatggagatatcaattatcaggagtttgcaaagcggctttggggtgacatctacttc
aacccgaagacccgcaagttcactaaaaaggccccaacgagcagttcccagcgcagtttt
gtggagttcattctggagcccctgtacaagatcttggctcaggtggtgggggacgtggac
acgaccctgcccaggactctggatgaacttggcatccacctgaccaaagaggaattgaaa
ttgaacattcgccccctcctgcggcttgtctgcaagaagttctttggggaattcacaggc
tttgtggacatgtgtgtgcagcatatcccctccccgaaggtgggagccaagacgaaaatc
gagcatacctacactggtggcgttgactctgatctaggggaggccatgagtgaatgcgac
cctgacggtccactgatgtgtcacacaacgaaaatgtacagcacagatgacggcgttcag
ttccatgcctttggcagagtgctcagtggtaccatccatgctgggcagcctgtgaaggtc
cttggagaaaactataccctggaagatgaggaggattcccagatctgcaccgtcggacgc
ctctggatctcggttgcgaggtatcacattgaggtaaaccgggttcctgctggcaactgg
gtgctgatagaaggagtggaccagcccatagtgaagactgcaactgtcacggagcctcgg
ggcaatgaggaggctcagatcttccgtcctttaaagttcaacaccacatctgtcatcaaa
atagctgtagaaccggtcaacccctcggagctccccaaaatgttagatggtctccgcaaa
gtcaacaagagttacccctcgcttactactaaggtggaagagtctggggagcacgtgatc
ctggggacgggggagctctacctggattgtgtgatgcacgatctacggaagatgtattca
gagattgatatcaaggtcgccgatccagttgtgacattctgcgagacagtggtggaaacg
tcctccctgaagtgctttgctgagacgcccaacaagaagaacaagatcacgatgattgct
gagcctctggagaagggactcgcagaggacattgaaaatgaagtggtccagataacgtgg
aacagaaagaagctgggtgaatttttccagaccaaatatgactgggatttgctggctgcc
cgttccatctgggcctttgggccagacgccactggtccaaacatcctagtagatgatacg
ctgccctcagaggtggacaagtcgctgctgggctctgtgaaggacagcattgtgcaggga
tttcagtgggggaccagggaagggcctctctgtgatgaattgatccgcaatgtgaagttt
aagatcctggatgcagtgattgctcaggagcccttgcaccggggtggaggacagatcatc
ccgacggcccggagagtggtgtattccgctttcctgatggccacccctcgtctgatggag
ccctactacttcgtggaggtgcaggctcctgccgactgtgtgtctgcggtgtacacggtc
ctggccaggcggagaggccatgtgacacaagatgctccgatcccgggctcccctctctac
accatcaaagccttcatcccagccattgactcatttgggtttgagacagacttgaggacc
cacacgcagggacaagccttctcgctctctgtcttccaccactggcagattgtgcctggt
gaccccttggacaagagcattgtcatccgacccctggagccccagccagccccgcatctg
gccagagagttcatgataaagaccaggcgtaggaagggcttgagcgaggacgtgagcatc
agcaagttcttcgacgaccccatgttgctggagctggccaagcaagatgtcgttctcaac
taccccatgtga
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