KEGG   Pyxicephalus adspersus (African bullfrog): 140324311
Entry
140324311         CDS       T11284                                 
Symbol
TPM1
Name
(RefSeq) tropomyosin alpha-1 chain isoform X1
  KO
K09290  tropomyosin 3
Organism
pads  Pyxicephalus adspersus (African bullfrog)
Pathway
pads04260  Cardiac muscle contraction
pads04261  Adrenergic signaling in cardiomyocytes
pads04814  Motor proteins
pads04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:pads00001]
 09140 Cellular Processes
  09142 Cell motility
   04814 Motor proteins
    140324311 (TPM1)
   04820 Cytoskeleton in muscle cells
    140324311 (TPM1)
 09150 Organismal Systems
  09153 Circulatory system
   04260 Cardiac muscle contraction
    140324311 (TPM1)
   04261 Adrenergic signaling in cardiomyocytes
    140324311 (TPM1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:pads04812]
    140324311 (TPM1)
Cytoskeleton proteins [BR:pads04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Tropomyosins
     140324311 (TPM1)
SSDB
Motif
Pfam: Tropomyosin CLZ Laminin_II CCDC39 Rod_CreS TMF_DNA_bd Sec2p CENP-F_leu_zip FKBP15 ATG16 PUMA_CC SlyX DUF3450 DUF745 Lebercilin CC_Bre1 DUF1664 HAUS1 DUF7518 Laminin_I XhlA DUF16 TMP_N FPP
Other DBs
NCBI-GeneID: 140324311
NCBI-ProteinID: XP_072258185
LinkDB
Position
2:complement(117558273..117590928)
AA seq 284 aa
MDAIKKKMQMLKLDKENALDRAEQAEADKKGAEDKSKQLEDELVALQKKLKGTEDELDKY
SEALKDAQEKLELAEKKATDAEADVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAA
DESERGMKVIENRALKDEEKMELQEIQLKEAKHIAEEADRKYEEVARKLVIIEGDLERAE
ERAELSESKCAELEEELKTVTNNLKSLEAQAEKYSQKEDKYEEEIKVLTDKLKEAETRAE
FAERTVAKLEKTIDDLEDELYAQKLKYKAISEELDHALNDMTSI
NT seq 855 nt   +upstreamnt  +downstreamnt
atggacgccatcaagaagaagatgcagatgctcaagctcgacaaggaaaatgccttggac
agagcagaacaggctgaagccgacaagaagggagcagaagacaagagcaaacagctggag
gatgaacttgtagcactgcagaagaaactgaagggtactgaggatgagctggacaaatat
tcagaagctcttaaagatgcccaggagaagttggagcttgctgagaagaaagccactgat
gctgaagctgatgtagcctcattgaacaggcgtatccagctggttgaggaggagttggat
cgtgctcaggagcgtctggccacagctcttcagaaattggaggaggctgagaaggctgca
gatgagagcgaaagaggcatgaaggtcattgaaaacagagccctgaaggatgaagagaag
atggagttgcaggaaatccagctgaaggaagccaagcacattgctgaggaggctgaccgc
aaatatgaagaggtcgcccgtaagctggtcatcattgagggtgacctggaacgtgcagag
gaacgtgctgagctgtcagaaagcaaatgtgccgagcttgaggaagaattgaaaactgtc
accaacaacctgaaatctctggaggcccaggcagagaagtactcccagaaggaggacaaa
tatgaagaggaaatcaaggttcttacagacaaactgaaggaggctgagacacgtgctgaa
tttgcagagaggacagtagccaagttggaaaagaccattgatgatttagaagatgaactg
tatgcccagaaactgaagtacaaagccatcagtgaagaactggatcacgctctcaatgac
atgacttcaatataa

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