Pyxicephalus adspersus (African bullfrog): 140324311
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Entry
140324311 CDS
T11284
Symbol
TPM1
Name
(RefSeq) tropomyosin alpha-1 chain isoform X1
KO
K09290
tropomyosin 3
Organism
pads Pyxicephalus adspersus (African bullfrog)
Pathway
pads04260
Cardiac muscle contraction
pads04261
Adrenergic signaling in cardiomyocytes
pads04814
Motor proteins
pads04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pads00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
140324311 (TPM1)
04820 Cytoskeleton in muscle cells
140324311 (TPM1)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
140324311 (TPM1)
04261 Adrenergic signaling in cardiomyocytes
140324311 (TPM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pads04812
]
140324311 (TPM1)
Cytoskeleton proteins [BR:
pads04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Tropomyosins
140324311 (TPM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tropomyosin
CLZ
Laminin_II
Crescentin
TMF_DNA_bd
CENP-F_leu_zip
PUMA_CC
ATG16
Lebercilin
DUF745
DUF3450
SlyX
DUF1664
DUF7518
Laminin_I
DUF16
FPP
Motif
Other DBs
NCBI-GeneID:
140324311
NCBI-ProteinID:
XP_072258185
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All DBs
Position
2:complement(117558273..117590928)
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AA seq
284 aa
AA seq
DB search
MDAIKKKMQMLKLDKENALDRAEQAEADKKGAEDKSKQLEDELVALQKKLKGTEDELDKY
SEALKDAQEKLELAEKKATDAEADVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAA
DESERGMKVIENRALKDEEKMELQEIQLKEAKHIAEEADRKYEEVARKLVIIEGDLERAE
ERAELSESKCAELEEELKTVTNNLKSLEAQAEKYSQKEDKYEEEIKVLTDKLKEAETRAE
FAERTVAKLEKTIDDLEDELYAQKLKYKAISEELDHALNDMTSI
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atggacgccatcaagaagaagatgcagatgctcaagctcgacaaggaaaatgccttggac
agagcagaacaggctgaagccgacaagaagggagcagaagacaagagcaaacagctggag
gatgaacttgtagcactgcagaagaaactgaagggtactgaggatgagctggacaaatat
tcagaagctcttaaagatgcccaggagaagttggagcttgctgagaagaaagccactgat
gctgaagctgatgtagcctcattgaacaggcgtatccagctggttgaggaggagttggat
cgtgctcaggagcgtctggccacagctcttcagaaattggaggaggctgagaaggctgca
gatgagagcgaaagaggcatgaaggtcattgaaaacagagccctgaaggatgaagagaag
atggagttgcaggaaatccagctgaaggaagccaagcacattgctgaggaggctgaccgc
aaatatgaagaggtcgcccgtaagctggtcatcattgagggtgacctggaacgtgcagag
gaacgtgctgagctgtcagaaagcaaatgtgccgagcttgaggaagaattgaaaactgtc
accaacaacctgaaatctctggaggcccaggcagagaagtactcccagaaggaggacaaa
tatgaagaggaaatcaaggttcttacagacaaactgaaggaggctgagacacgtgctgaa
tttgcagagaggacagtagccaagttggaaaagaccattgatgatttagaagatgaactg
tatgcccagaaactgaagtacaaagccatcagtgaagaactggatcacgctctcaatgac
atgacttcaatataa
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