Pyxicephalus adspersus (African bullfrog): 140342599
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Entry
140342599 CDS
T11284
Symbol
THBS1
Name
(RefSeq) thrombospondin-1
KO
K16857
thrombospondin 1
Organism
pads Pyxicephalus adspersus (African bullfrog)
Pathway
pads04115
p53 signaling pathway
pads04145
Phagosome
pads04148
Efferocytosis
pads04350
TGF-beta signaling pathway
pads04510
Focal adhesion
pads04512
ECM-receptor interaction
pads04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pads00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
140342599 (THBS1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
140342599 (THBS1)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
140342599 (THBS1)
04148 Efferocytosis
140342599 (THBS1)
09143 Cell growth and death
04115 p53 signaling pathway
140342599 (THBS1)
09144 Cellular community - eukaryotes
04510 Focal adhesion
140342599 (THBS1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
140342599 (THBS1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pads04131
]
140342599 (THBS1)
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
pads00536
]
140342599 (THBS1)
Membrane trafficking [BR:
pads04131
]
Endocytosis
Phagocytosis
Opsonins
140342599 (THBS1)
Glycosaminoglycan binding proteins [BR:
pads00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
140342599 (THBS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP_C
TSP_3
TSP_1
TSP1_spondin
VWC
VWC2L_2nd
TSP1_CFP_C
EGF_3
Laminin_G_2
TSP1_CCN
cEGF
TSP1_ADAMTS
EGF
Laminin_G_1
Motif
Other DBs
NCBI-GeneID:
140342599
NCBI-ProteinID:
XP_072284946
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All DBs
Position
12:16597004..16613103
Genome browser
AA seq
1176 aa
AA seq
DB search
MGLTKGVFLLLMLSVPHTKQASENGADDNSVFDLFELTGVSRKLSSRKSQGVSLVKGPDQ
SSPAFRIENPNLIPPVPEEKFQDILDSIRSERGFILLATLRQIKKTRGALLSIEKKDGTG
HVFSLTSNGEAGTLDLSVSIEDKQQVVSVEEARLATGHWKNITLFVQEDRAQLYVGCDKM
ENAELDVPIHHILLGDMASSAQMRVAKGGVKDNFQGVLQNLRFVFGTSMDVILRNKGCSS
SNYDLENSVNDSRPAIRTNYIGHKTKDVDGVCGISCDELKNMFFEMKGLKAVISTLQAKI
QKVTEENMLIAEVVKVKVTPGGVCMHNGVKYNNMDEWTVDSCTECTCQNSVVICRKVSCP
LIPCTNATIPDGECCPRCWPSDSPEDGWSPWSDWTPCSVTCGHGVQQRGRSCDSLNNRCE
GSSVQTRSCIIRECDKRFKQDGGWSHWSPWSSCSVTCGTGMITRIRLCNSPVPQLNGKHC
VGEGRESKQCQKDSCPINGQWGPWSPWDLCSVTCGGGAQKRERLCNNPKPQFGGKDCLGD
SVDSRICNKQDCPIDGCLSNPCFAGVKCTSFADGSWHCGACPMGYIGNGVECTDVDECKE
VPDACFNLNSVHRCENTEPGYNCLPCPPRYTGTQPFGKSIEDAKTNKQVCNPRNPCLDGT
HNCNRNAKCIYLGLYTDPMFRCECKPGYAGNGIICGEDTDLDGWPNENLTCVANATYHCK
KDNCPNLPNSGQEDYDKDGIGDACDSDDDNDGIPDDRDNCAFVYNPAQYDYDRDDVGDRC
DNCPYNHNPDQADTDGNGEGDTCSVDIDGDGILNEGDNCPFVYNVDQRDTDKDGIGDQCD
NCPLEHNPDQTDSDSDLIGDKCDSNEDIDEDGHQNNLDNCPYIPNANQADHDKDGKGDAC
DHDDDNDGIPDEKDNCRLVPNPDQVDSNGDGRGDVCQYDFDNDKIPDSEDVCPENYAIST
TDFRKFQMVPLDPKGTSQIDPNWVVRHQGKELVQTVNCDPGIAVGFDEFSAVDFSGTFFV
NTERDDDYAGFVFGYQSSSRFYVVMWKQITQTYWDTTPTKAQGYSGLSIKVVNSTTGPGE
HLRNALWHTGNTPGQVQTLWHDPRHAGWKDFTAYRWHLIHRPKTGFIRVVMFEGKKIMAD
SGPIYDKTYAGGRLGLFVFSQEMVFFSDLKYECRDS
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
atgggactaacaaagggtgttttcctattattaatgctgtcagtcccccacacaaagcaa
gcatcagaaaatggagcagatgacaacagcgtctttgatctgtttgaactaactggagtc
agtcgcaagctgagctctcgcaaatctcaaggagtttctttagtaaaggggcctgatcaa
tcaagcccagcttttagaatagaaaatcctaatctgatacctccagtgccagaggaaaaa
tttcaagatatactggacagcattcgatctgagcgaggctttattttattggctacttta
cgtcagataaaaaagactagaggagcgctcttgtctatcgaaaagaaggatggcacagga
catgttttcagcctcacatccaatggtgaagctggaacattagacttgagtgtcagcata
gaagacaagcagcaagtggtgtctgttgaagaagccaggctggccacaggccactggaag
aacattactctttttgtgcaagaagatcgagctcagctttatgtgggttgtgacaagatg
gaaaatgctgagcttgatgtgccaatccatcatattctccttggagacatggcaagcagt
gctcaaatgagagtggcaaaaggaggcgtgaaagacaatttccagggtgttctacagaac
ctacgttttgtttttggaaccagtatggatgtgattcttagaaataaaggctgctccagc
tcaaactatgatttggagaactcagtcaatgattctcgtccagctatccgaacaaattac
attggtcataagacaaaggatgttgatggtgtatgtggaatttcctgtgatgagctaaaa
aacatgttttttgagatgaaaggtcttaaagcagtaatctctactctccaagcaaaaata
cagaaagttacagaggaaaatatgcttattgctgaagtagtgaaggtaaaggtgacacca
ggtggtgtgtgtatgcataatggcgtcaaatataacaacatggatgagtggactgttgac
agttgtactgagtgtacttgccagaattcagtggttatttgccgaaaagtttcttgtcca
cttataccctgcaccaatgccacaattcctgatggagaatgctgtcccagatgctggcca
agcgactctcctgaagatggttggtctccatggtcagattggactccttgctctgtaaca
tgtggtcatggtgtccagcaaaggggccgatcgtgtgatagtcttaataaccgctgtgaa
gggtcctctgttcaaacaagatcgtgcattatcagagaatgtgataagcgatttaaacaa
gatggtggatggagtcactggtctccatggtcctcgtgttccgtcacttgtggaactgga
atgatcactagaattcgtctatgtaactcacctgttccacagcttaatggcaagcactgt
gtgggtgaaggcagagagagtaagcaatgccaaaaagattcttgtccaattaatggtcag
tggggaccttggtcaccctgggacttatgtagcgtgacatgtggaggtggtgctcagaaa
cgtgagcgtctctgcaataatcctaaaccccagttcggtggtaaagactgccttggagat
agtgttgacagccgcatttgcaataagcaggactgccccattgatggatgcctatcaaat
ccttgttttgctggagttaaatgcacaagctttgctgatggctcttggcactgtggtgca
tgccctatggggtatataggaaatggtgttgaatgtacagatgttgatgagtgcaaggag
gtgcctgatgcttgtttcaaccttaatagcgtgcacagatgtgaaaacacagagcctgga
tacaactgtcttccctgtcctccaagatacactggcacacaaccatttggcaagagtatt
gaggatgccaaaacaaataaacaggtctgtaacccacggaatccatgtcttgatggaaca
cacaactgtaacaggaatgcaaaatgcatctaccttggactttacactgatcccatgttc
cgctgtgaatgcaaaccaggatatgctgggaatggcatcatttgcggtgaagacacagac
ttggatggatggcctaatgagaaccttacatgtgttgccaatgctacctatcattgcaaa
aaagataactgccccaatcttcccaactcaggccaagaagattatgataaagatggaatt
ggagatgcctgtgatagtgatgatgataatgatggaatcccagatgacagggacaattgt
gcatttgtatacaaccctgcccaatatgactatgaccgtgatgatgtgggtgatcgctgt
gacaactgcccatacaaccataatccagaccaggctgatactgatggcaatggggaagga
gatacctgctctgtggatattgatggagatggtattctcaatgaaggagacaactgcccc
tttgtttacaatgtagaccaaagagatacagataaggatggcattggagaccagtgtgat
aactgtcccttggagcacaatccagatcagactgactctgactctgatctcattggtgat
aaatgtgacagcaatgaagacatagatgaggatggacatcagaacaacctagacaactgt
ccttatattcccaatgccaatcaggctgaccatgataaggatggcaagggtgatgcttgt
gatcatgatgatgacaatgatggcattccagatgaaaaagataattgcaggctggtgcct
aaccctgatcaggttgatagtaatggtgatggacgtggtgatgtctgccagtatgacttt
gataatgacaaaattcctgactctgaggatgtttgcccagagaattatgcaattagcaca
actgacttccgtaaatttcaaatggtgcctctggatccaaaagggacatcacagatcgat
cccaactgggtggtcagacaccagggaaaagaactggtacagactgttaactgtgaccct
ggcattgctgttggttttgatgagtttagtgcagtggatttcagtggcacctttttcgtc
aacactgagagagatgatgactatgctggctttgtgtttggttaccaatccagtagcaga
ttttatgtggttatgtggaaacaaatcacccagacctactgggacactactcctactaaa
gctcagggatactctggtctctctatcaaggttgtaaactcaacaactggacctggagaa
catttaaggaatgctctgtggcacacaggcaatacaccaggacaggttcagactctctgg
catgatcctcgccatgcaggatggaaagatttcactgcttacagatggcatttaatccac
agacctaagactggatttattcgtgttgtgatgtttgaagggaaaaaaattatggcggac
tcaggaccaatctatgataagacatatgctggaggaagattaggactgtttgtattctca
caggagatggtgttcttttcagatcttaaatacgagtgcagagactcataa
DBGET
integrated database retrieval system
